Conservation of cofitness between CSW01_01015 and CSW01_00260 in Vibrio cholerae E7946 ATCC 55056

103 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01015 DNA helicase II 1.0 CSW01_00260 5-(carboxyamino)imidazole ribonucleotide synthase 0.68 19
Escherichia coli ECRC62 0.71 BNILDI_04995 uvrD DNA helicase II 0.27 BNILDI_22260 purK 5-(carboxyamino)imidazole ribonucleotide synthase low > 75
Escherichia coli ECOR27 0.71 NOLOHH_06540 uvrD DNA helicase II 0.28 NOLOHH_00830 purK 5-(carboxyamino)imidazole ribonucleotide synthase low > 76
Escherichia coli BW25113 0.71 b3813 uvrD DNA-dependent ATPase I and helicase II (NCBI) 0.27 b0522 purK phosphoribosylaminoimidazole carboxylase (NCBI) low > 76
Escherichia coli ECRC99 0.71 KEDOAH_13740 uvrD DNA helicase II 0.27 KEDOAH_20130 purK 5-(carboxyamino)imidazole ribonucleotide synthase
Escherichia coli Nissle 1917 0.71 ECOLIN_RS21885 DNA helicase II 0.28 ECOLIN_RS03025 5-(carboxyamino)imidazole ribonucleotide synthase low > 55
Escherichia coli ECRC102 0.71 NIAGMN_12165 uvrD DNA helicase II 0.27 NIAGMN_05895 purK 5-(carboxyamino)imidazole ribonucleotide synthase low > 80
Klebsiella michiganensis M5al 0.71 BWI76_RS01220 DNA-dependent helicase II 0.29 BWI76_RS07065 5-(carboxyamino)imidazole ribonucleotide synthase low > 92
Escherichia coli ECRC100 0.71 OKFHMN_14410 uvrD DNA helicase II 0.27 OKFHMN_07840 purK 5-(carboxyamino)imidazole ribonucleotide synthase low > 79
Escherichia coli ECRC98 0.71 JDDGAC_18035 uvrD DNA helicase II 0.27 JDDGAC_11490 purK 5-(carboxyamino)imidazole ribonucleotide synthase low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_04237 DNA helicase II 0.27 OHPLBJKB_03159 N5-carboxyaminoimidazole ribonucleotide synthase low > 74
Escherichia fergusonii Becca 0.71 EFB2_04824 DNA helicase II 0.28 EFB2_03540 N5-carboxyaminoimidazole ribonucleotide synthase low > 86
Escherichia coli BL21 0.71 ECD_03689 DNA-dependent ATPase I and helicase II 0.27 ECD_00472 N5-carboxyaminoimidazole ribonucleotide synthase
Escherichia coli ECRC101 0.71 MCAODC_04915 uvrD DNA helicase II 0.27 MCAODC_27060 purK 5-(carboxyamino)imidazole ribonucleotide synthase low > 87
Serratia liquefaciens MT49 0.71 IAI46_00735 DNA helicase II 0.29 IAI46_05370 5-(carboxyamino)imidazole ribonucleotide synthase low > 87
Escherichia coli ECOR38 0.71 HEPCGN_13115 uvrD DNA helicase II 0.27 HEPCGN_06480 purK 5-(carboxyamino)imidazole ribonucleotide synthase low > 88
Klebsiella pneumoniae MKP103 0.71 KDGMDA_09710 DNA helicase II 0.29 KDGMDA_15000 5-(carboxyamino)imidazole ribonucleotide synthase low > 95
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF241 ATP-dependent DNA helicase UvrD/PcrA 0.29 GFF4438 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) low > 78
Enterobacter sp. TBS_079 0.70 MPMX20_04463 DNA helicase II 0.27 MPMX20_01097 N5-carboxyaminoimidazole ribonucleotide synthase low > 85
Enterobacter asburiae PDN3 0.70 EX28DRAFT_4482 ATP-dependent DNA helicase UvrD (EC 3.6.1.-) 0.28 EX28DRAFT_2460 phosphoribosylaminoimidazole carboxylase, PurK protein
Dickeya dadantii 3937 0.70 DDA3937_RS19880 DNA helicase II 0.28 DDA3937_RS15110 5-(carboxyamino)imidazole ribonucleotide synthase low > 74
Dickeya dianthicola ME23 0.70 DZA65_RS21080 DNA helicase II 0.29 DZA65_RS15995 5-(carboxyamino)imidazole ribonucleotide synthase low > 75
Dickeya dianthicola 67-19 0.70 HGI48_RS20035 DNA helicase II 0.29 HGI48_RS15190 5-(carboxyamino)imidazole ribonucleotide synthase low > 71
Pectobacterium carotovorum WPP14 0.70 HER17_RS01360 DNA helicase II 0.30 HER17_RS06470 5-(carboxyamino)imidazole ribonucleotide synthase low > 75
Pantoea sp. MT58 0.69 IAI47_18390 DNA helicase II 0.28 IAI47_14355 5-(carboxyamino)imidazole ribonucleotide synthase low > 76
Erwinia tracheiphila SCR3 0.68 LU632_RS24125 uvrD DNA helicase II 0.28 LU632_RS15250 purK 5-(carboxyamino)imidazole ribonucleotide synthase
Pantoea agglomerans CFBP13505 P0401 0.68 PagCFBP13505_RS15370 DNA helicase II 0.27 PagCFBP13505_RS10855 5-(carboxyamino)imidazole ribonucleotide synthase
Erwinia tracheiphila HP pepo 2.2 0.68 IJEDHG_08770 uvrD DNA helicase II 0.29 IJEDHG_01025 purK 5-(carboxyamino)imidazole ribonucleotide synthase
Rahnella sp. WP5 0.68 EX31_RS15175 DNA helicase II 0.29 EX31_RS22620 5-(carboxyamino)imidazole ribonucleotide synthase low > 89
Erwinia amylovora T8 0.68 OLJFJH_06425 DNA helicase II 0.28 OLJFJH_17635 5-(carboxyamino)imidazole ribonucleotide synthase low > 58
Shewanella sp. ANA-3 0.67 Shewana3_0469 uvrD DNA-dependent helicase II (RefSeq) 0.29 Shewana3_3156 phosphoribosylaminoimidazole carboxylase ATPase subunit (RefSeq) low > 73
Shewanella oneidensis MR-1 0.67 SO0467 uvrD DNA helicase II (NCBI ptt file) 0.28 SO3555 purK phosphoribosylaminoimidazole carboxylase, ATPase subunit (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.66 Sama_0419 uvrD DNA-dependent helicase II (RefSeq) 0.29 Sama_1063 phosphoribosylaminoimidazole carboxylase ATPase subunit (RefSeq) low > 62
Shewanella loihica PV-4 0.66 Shew_3385 uvrD DNA-dependent helicase II (RefSeq) 0.29 Shew_1249 phosphoribosylaminoimidazole carboxylase, ATPase subunit (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.65 MIT1002_00153 DNA helicase II 0.46 MIT1002_00522 N5-carboxyaminoimidazole ribonucleotide synthase low > 70
Pseudomonas aeruginosa MRSN321 0.60 DY961_RS25505 uvrD;go_function=DNA DNA helicase II 0.34 DY961_RS25395 5-(carboxyamino)imidazole ribonucleotide synthase low > 100
Pseudomonas aeruginosa PUPa3 0.60 DQ20_RS57955 uvrD;go_function=DNA DNA helicase II 0.34 DQ20_RS57855 5-(carboxyamino)imidazole ribonucleotide synthase
Pseudomonas aeruginosa PA14 0.60 IKLFDK_26200 DNA helicase II 0.34 IKLFDK_26300 5-(carboxyamino)imidazole ribonucleotide synthase low > 98
Pseudomonas putida KT2440 0.60 PP_5352 DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex 0.36 PP_5335 N5-carboxyaminoimidazole ribonucleotide synthase
Pseudomonas sp. BP01 0.60 JOY50_RS08735 uvrD DNA helicase II 0.37 JOY50_RS08825 5-(carboxyamino)imidazole ribonucleotide synthase
Pseudomonas sp. SVBP6 0.60 COO64_RS01845 uvrD DNA helicase II 0.36 COO64_RS01745 5-(carboxyamino)imidazole ribonucleotide synthase low > 93
Pseudomonas fluorescens SBW25 0.59 PFLU_RS29900 DNA helicase II 0.36 PFLU_RS29800 5-(carboxyamino)imidazole ribonucleotide synthase
Pseudomonas fluorescens SBW25-INTG 0.59 PFLU_RS29900 DNA helicase II 0.36 PFLU_RS29800 5-(carboxyamino)imidazole ribonucleotide synthase
Pseudomonas orientalis W4I3 0.59 QF045_RS02600 DNA helicase II 0.36 QF045_RS02475 5-(carboxyamino)imidazole ribonucleotide synthase low > 93
Pseudomonas lactucae CFBP13502 0.59 GEMAOFIL_00116 DNA helicase II 0.36 GEMAOFIL_00089 N5-carboxyaminoimidazole ribonucleotide synthase
Pseudomonas sp. DMC3 0.59 GFF512 DNA helicase II 0.36 GFF485 N5-carboxyaminoimidazole ribonucleotide synthase low > 89
Pseudomonas fluorescens FW300-N2E3 0.59 AO353_10055 DNA helicase II 0.35 AO353_09935 phosphoribosylaminoimidazole carboxylase
Pseudomonas sp. S08-1 0.59 OH686_13045 ATP-dependent DNA helicase UvrD/PcrA 0.37 OH686_13380 N5-carboxyaminoimidazole ribonucleotide synthase
Pseudomonas fluorescens GW456-L13 0.59 PfGW456L13_724 ATP-dependent DNA helicase UvrD/PcrA 0.36 PfGW456L13_747 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
Pseudomonas stutzeri RCH2 0.59 Psest_4098 Superfamily I DNA and RNA helicases 0.37 Psest_4068 phosphoribosylaminoimidazole carboxylase, PurK protein
Pseudomonas fluorescens FW300-N1B4 0.59 Pf1N1B4_2005 ATP-dependent DNA helicase UvrD/PcrA 0.35 Pf1N1B4_2028 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
Pseudomonas fluorescens FW300-N2E2 0.59 Pf6N2E2_4273 ATP-dependent DNA helicase UvrD/PcrA 0.37 Pf6N2E2_4081 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
Pseudomonas fluorescens FW300-N2C3 0.59 AO356_11990 DNA helicase II 0.36 AO356_11075 phosphoribosylaminoimidazole carboxylase
Pseudomonas sp. RS175 0.59 PFR28_04523 DNA helicase II 0.37 PFR28_04495 N5-carboxyaminoimidazole ribonucleotide synthase
Kangiella aquimarina DSM 16071 0.58 B158DRAFT_0238 Superfamily I DNA and RNA helicases 0.31 B158DRAFT_0610 5-(carboxyamino)imidazole ribonucleotide synthase
Pseudomonas segetis P6 0.58 ACVTMO_RS00885 uvrD DNA helicase II 0.36 ACVTMO_RS00755 5-(carboxyamino)imidazole ribonucleotide synthase
Pseudomonas syringae pv. syringae B728a 0.58 Psyr_5065 ATP-dependent DNA helicase UvrD 0.36 Psyr_5047 5-(carboxyamino)imidazole ribonucleotide synthase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.58 Psyr_5065 ATP-dependent DNA helicase UvrD 0.36 Psyr_5047 5-(carboxyamino)imidazole ribonucleotide synthase
Marinobacter adhaerens HP15 0.56 HP15_3403 UvrD/REP helicase 0.33 HP15_2350 phosphoribosylaminoimidazole carboxylase ATPase subunit
Rhodanobacter sp. FW510-T8 0.55 OKGIIK_16775 DNA helicase 0.32 OKGIIK_03050 purK 5-(carboxyamino)imidazole ribonucleotide synthase
Dyella japonica UNC79MFTsu3.2 0.55 ABZR86_RS16965 DNA helicase II 0.30 ABZR86_RS09830 5-(carboxyamino)imidazole ribonucleotide synthase
Lysobacter sp. OAE881 0.55 ABIE51_RS01985 DNA helicase II 0.32 ABIE51_RS15390 5-(carboxyamino)imidazole ribonucleotide synthase low > 62
Xanthomonas campestris pv. campestris strain 8004 0.54 Xcc-8004.5114.1 ATP-dependent DNA helicase UvrD/PcrA 0.32 Xcc-8004.2012.1 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) low > 74
Rhodanobacter denitrificans MT42 0.54 LRK55_RS06595 DNA helicase II 0.30 LRK55_RS13530 5-(carboxyamino)imidazole ribonucleotide synthase
Rhodanobacter denitrificans FW104-10B01 0.54 LRK54_RS06850 DNA helicase II 0.30 LRK54_RS13815 5-(carboxyamino)imidazole ribonucleotide synthase
Rhodanobacter sp000427505 FW510-R12 0.53 LRK53_RS01560 UvrD-helicase domain-containing protein 0.29 LRK53_RS14785 5-(carboxyamino)imidazole ribonucleotide synthase
Methylophilus sp. DMC18 0.48 GFF1664 DNA helicase II 0.24 GFF1769 N5-carboxyaminoimidazole ribonucleotide synthase
Burkholderia phytofirmans PsJN 0.45 BPHYT_RS13840 DNA-dependent helicase 0.23 BPHYT_RS16245 phosphoribosylaminoimidazole carboxylase
Dechlorosoma suillum PS 0.45 Dsui_1227 DNA/RNA helicase, superfamily I 0.23 Dsui_0091 phosphoribosylaminoimidazole carboxylase, PurK protein
Paraburkholderia graminis OAS925 0.45 ABIE53_002936 DNA helicase-2/ATP-dependent DNA helicase PcrA 0.23 ABIE53_003423 5-(carboxyamino)imidazole ribonucleotide synthase
Paraburkholderia bryophila 376MFSha3.1 0.44 H281DRAFT_04469 ATP-dependent DNA helicase UvrD 0.24 H281DRAFT_04185 5-(carboxyamino)imidazole ribonucleotide synthase
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS05110 3'-5' exonuclease 0.22 QEN71_RS02450 5-(carboxyamino)imidazole ribonucleotide synthase
Acidovorax sp. GW101-3H11 0.44 Ac3H11_1660 ATP-dependent DNA helicase UvrD/PcrA 0.22 Ac3H11_675 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
Variovorax sp. OAS795 0.44 ABID97_RS09150 UvrD-helicase domain-containing protein 0.23 ABID97_RS01700 5-(carboxyamino)imidazole ribonucleotide synthase
Cupriavidus basilensis FW507-4G11 0.44 RR42_RS15090 DNA helicase 0.20 RR42_RS03230 phosphoribosylaminoimidazole carboxylase
Herbaspirillum seropedicae SmR1 0.43 HSERO_RS02160 DNA-dependent helicase 0.23 HSERO_RS03370 phosphoribosylaminoimidazole carboxylase
Ralstonia sp. UNC404CL21Col 0.43 ABZR87_RS15705 UvrD-helicase domain-containing protein 0.20 ABZR87_RS08090 5-(carboxyamino)imidazole ribonucleotide synthase
Variovorax sp. SCN45 0.43 GFF4000 ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) 0.24 GFF5513 N5-carboxyaminoimidazole ribonucleotide synthase (EC 6.3.4.18) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.42 GFF5598 ATP-dependent DNA helicase UvrD/PcrA 0.25 GFF2770 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS03775 DNA-dependent helicase 0.20 RALBFv3_RS12200 5-(carboxyamino)imidazole ribonucleotide synthase
Ralstonia solanacearum GMI1000 0.42 RS_RS11220 DNA-dependent helicase 0.20 RS_RS02885 5-(carboxyamino)imidazole ribonucleotide synthase
Ralstonia solanacearum UW163 0.42 UW163_RS09895 DNA-dependent helicase 0.20 UW163_RS01410 5-(carboxyamino)imidazole ribonucleotide synthase
Ralstonia solanacearum PSI07 0.42 RPSI07_RS13455 DNA-dependent helicase 0.20 RPSI07_RS21130 5-(carboxyamino)imidazole ribonucleotide synthase
Castellaniella sp019104865 MT123 0.42 ABCV34_RS05210 UvrD-helicase domain-containing protein 0.23 ABCV34_RS00565 5-(carboxyamino)imidazole ribonucleotide synthase
Sphingobium sp. HT1-2 0.36 GFF1640 ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) 0.28 GFF1298 N5-carboxyaminoimidazole ribonucleotide synthase (EC 6.3.4.18)
Azospirillum brasilense Sp245 0.35 AZOBR_RS12445 DNA helicase II 0.28 AZOBR_RS06140 phosphoribosylaminoimidazole carboxylase
Bosea sp. OAE506 0.35 ABIE41_RS12730 UvrD-helicase domain-containing protein 0.26 ABIE41_RS09245 5-(carboxyamino)imidazole ribonucleotide synthase 0.28 53
Sphingomonas koreensis DSMZ 15582 0.35 Ga0059261_0249 Superfamily I DNA and RNA helicases 0.27 Ga0059261_1428 5-(carboxyamino)imidazole ribonucleotide synthase
Phaeobacter inhibens DSM 17395 0.34 PGA1_c09450 DNA helicase II UvrD 0.25 PGA1_c24870 phosphoribosylaminoimidazole carboxylase ATPase subunit PurK low > 62
Azospirillum sp. SherDot2 0.34 MPMX19_01610 ATP-dependent DNA helicase PcrA 0.28 MPMX19_01418 N5-carboxyaminoimidazole ribonucleotide synthase
Magnetospirillum magneticum AMB-1 0.34 AMB_RS03725 DNA helicase II 0.24 AMB_RS11140 5-(carboxyamino)imidazole ribonucleotide synthase
Dinoroseobacter shibae DFL-12 0.33 Dshi_2483 UvrD/REP helicase (RefSeq) 0.26 Dshi_0680 phosphoribosylaminoimidazole carboxylase, ATPase subunit (RefSeq)
Echinicola vietnamensis KMM 6221, DSM 17526 0.33 Echvi_0292 Superfamily I DNA and RNA helicases 0.22 Echvi_0884 phosphoribosylaminoimidazole carboxylase, PurK protein
Mycobacterium tuberculosis H37Rv 0.33 Rv0949 Probable ATP-dependent DNA helicase II UvrD1 0.23 Rv3276c Probable phosphoribosylaminoimidazole carboxylase ATPase subunit PurK (air carboxylase) (AIRC)
Rhizobium sp. OAE497 0.33 ABIE40_RS11670 UvrD-helicase domain-containing protein 0.26 ABIE40_RS16070 5-(carboxyamino)imidazole ribonucleotide synthase low > 107
Brevundimonas sp. GW460-12-10-14-LB2 0.32 A4249_RS04960 UvrD-helicase domain-containing protein 0.25 A4249_RS08935 5-(carboxyamino)imidazole ribonucleotide synthase
Rhodospirillum rubrum S1H 0.32 Rru_A1536 UvrD/REP helicase (NCBI) 0.23 Rru_A1051 Phosphoribosylaminoimidazole carboxylase, ATPase subunit (NCBI) low > 58
Sinorhizobium meliloti 1021 0.31 SMc01461 DNA helicase II protein 0.27 SMc04002 phosphoribosylaminoimidazole carboxylase ATPase subunit low > 103
Pedobacter sp. GW460-11-11-14-LB5 0.31 CA265_RS12980 ATP-dependent DNA helicase 0.22 CA265_RS07745 5-(carboxyamino)imidazole ribonucleotide synthase
Pontibacter actiniarum KMM 6156, DSM 19842 0.31 CA264_07795 ATP-dependent DNA helicase 0.21 CA264_12600 5-(carboxyamino)imidazole ribonucleotide synthase
Mucilaginibacter yixingensis YX-36 DSM 26809 0.31 ABZR88_RS07840 ATP-dependent helicase 0.19 ABZR88_RS09290 5-(carboxyamino)imidazole ribonucleotide synthase
Cellulophaga baltica 18 0.30 M666_RS15390 3'-5' exonuclease 0.19 M666_RS01265 5-(carboxyamino)imidazole ribonucleotide synthase
Synechocystis sp000284455 PCC 6803 0.30 SGL_RS06660 DNA helicase PcrA 0.19 SGL_RS18210 5-(carboxyamino)imidazole ribonucleotide synthase
Synechococcus elongatus PCC 7942 0.29 Synpcc7942_2168 pcrA ATP-dependent DNA helicase, Rep family 0.22 Synpcc7942_1428 purK phosphoribosylaminoimidazole carboxylase ATPase subunit

Not shown: 9 genomes with orthologs for CSW01_01015 only; 9 genomes with orthologs for CSW01_00260 only