Conservation of cofitness between BPHYT_RS02610 and BPHYT_RS15920 in Burkholderia phytofirmans PsJN

88 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS02610 glycerol-3-phosphate dehydrogenase [NAD(P)+] 1.0 BPHYT_RS15920 argininosuccinate synthase 0.77 20
Paraburkholderia bryophila 376MFSha3.1 0.95 H281DRAFT_02000 glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.99 H281DRAFT_04120 argininosuccinate synthase 0.50 13
Paraburkholderia graminis OAS925 0.92 ABIE53_000667 glycerol-3-phosphate dehydrogenase (NAD(P)+) 1.00 ABIE53_003355 argininosuccinate synthase — —
Paraburkholderia sabiae LMG 24235 0.85 QEN71_RS01465 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.16 QEN71_RS09235 argininosuccinate synthase 0.82 15
Ralstonia solanacearum GMI1000 0.62 RS_RS01760 glycerol-3-phosphate dehydrogenase (NAD(P)(+)) 0.15 RS_RS12800 argininosuccinate synthase — —
Ralstonia solanacearum UW163 0.60 UW163_RS02660 glycerol-3-phosphate dehydrogenase 0.15 UW163_RS08445 argininosuccinate synthase — —
Ralstonia solanacearum IBSBF1503 0.60 RALBFv3_RS10920 glycerol-3-phosphate dehydrogenase 0.15 RALBFv3_RS05180 argininosuccinate synthase — —
Ralstonia sp. UNC404CL21Col 0.59 ABZR87_RS06770 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.15 ABZR87_RS00835 argininosuccinate synthase 0.70 19
Ralstonia solanacearum PSI07 0.58 RPSI07_RS22390 glycerol-3-phosphate dehydrogenase 0.15 RPSI07_RS12120 argininosuccinate synthase — —
Herbaspirillum seropedicae SmR1 0.55 HSERO_RS00795 glycerol-3-phosphate dehydrogenase 0.16 HSERO_RS07180 argininosuccinate synthase — —
Cupriavidus basilensis FW507-4G11 0.54 RR42_RS01845 glycerol-3-phosphate dehydrogenase 0.91 RR42_RS17170 argininosuccinate synthase — —
Variovorax sp. SCN45 0.50 GFF2573 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.15 GFF3096 Argininosuccinate synthase (EC 6.3.4.5) — —
Variovorax sp. OAS795 0.49 ABID97_RS07405 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.15 ABID97_RS21670 argininosuccinate synthase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF1222 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.14 GFF294 Argininosuccinate synthase (EC 6.3.4.5) — —
Acidovorax sp. GW101-3H11 0.46 Ac3H11_3860 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.14 Ac3H11_2616 Argininosuccinate synthase (EC 6.3.4.5) — —
Dechlorosoma suillum PS 0.43 Dsui_1277 glycerol-3-phosphate dehydrogenase 0.84 Dsui_3248 argininosuccinate synthase — —
Lysobacter sp. OAE881 0.42 ABIE51_RS00495 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.19 ABIE51_RS13405 argininosuccinate synthase — —
Desulfovibrio vulgaris Hildenborough JW710 0.42 DVU3159 gpsA glycerol-3-phosphate dehydrogenase (NAD(P)+) (TIGR) 0.59 DVU1095 argG argininosuccinate synthase (TIGR) 0.32 30
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.271.1 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.20 Xcc-8004.2318.1 Argininosuccinate synthase (EC 6.3.4.5) low > 74
Kangiella aquimarina DSM 16071 0.40 B158DRAFT_0712 Glycerol-3-phosphate dehydrogenase 0.22 B158DRAFT_1976 argininosuccinate synthase (EC 6.3.4.5) — —
Rhodanobacter sp. FW510-T8 0.40 OKGIIK_13015 gpsA glycerol-3-phosphate dehydrogenase 0.19 OKGIIK_09465 argG argininosuccinate synthase — —
Shewanella loihica PV-4 0.39 Shew_3803 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (RefSeq) 0.45 Shew_0205 argininosuccinate synthase (RefSeq) — —
Shewanella sp. ANA-3 0.38 Shewana3_0054 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (RefSeq) 0.46 Shewana3_3902 argininosuccinate synthase (RefSeq) — —
Rhodanobacter denitrificans MT42 0.38 LRK55_RS10550 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.19 LRK55_RS02155 argininosuccinate synthase — —
Dyella japonica UNC79MFTsu3.2 0.38 ABZR86_RS13250 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.20 ABZR86_RS08715 arginosuccinate synthetase (EC 6.3.4.5) (from data) — —
Rhodanobacter denitrificans FW104-10B01 0.38 LRK54_RS10860 NAD(P)-dependent glycerol-3-phosphate dehydrogenase 0.19 LRK54_RS02400 argininosuccinate synthase — —
Shewanella amazonensis SB2B 0.38 Sama_0063 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (RefSeq) 0.45 Sama_0259 argininosuccinate synthase (RefSeq) — —
Shewanella oneidensis MR-1 0.38 SO0053 gpsA glycerol-3-phosphate dehydrogenase (NAD(P)+) (NCBI ptt file) 0.46 SO0278 argG argininosuccinate synthase (NCBI ptt file) — —
Alteromonas macleodii MIT1002 0.38 MIT1002_00485 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.46 MIT1002_00468 Argininosuccinate synthase low > 70
Rhodospirillum rubrum S1H 0.37 Rru_A3571 Glycerol-3-phosphate dehydrogenase (NAD(P)+) (NCBI) 0.68 Rru_A3751 Argininosuccinate synthase (NCBI) low > 58
Azospirillum sp. SherDot2 0.37 MPMX19_02123 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.70 MPMX19_02369 Argininosuccinate synthase — —
Sphingomonas koreensis DSMZ 15582 0.37 Ga0059261_2234 Glycerol-3-phosphate dehydrogenase 0.64 Ga0059261_1393 argininosuccinate synthase (EC 6.3.4.5) low > 68
Azospirillum brasilense Sp245 0.36 AZOBR_RS00325 glycerol-3-phosphate dehydrogenase 0.70 AZOBR_RS00785 argininosuccinate synthase — —
Serratia liquefaciens MT49 0.36 IAI46_24690 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.48 IAI46_24505 argininosuccinate synthase low > 86
Rahnella sp. WP5 0.36 EX31_RS14340 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.15 EX31_RS13445 argininosuccinate synthase 0.74 18
Escherichia coli ECRC102 0.36 NIAGMN_13515 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.14 NIAGMN_15850 argG argininosuccinate synthase — —
Escherichia coli ECRC101 0.36 MCAODC_06265 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.14 MCAODC_08610 argG argininosuccinate synthase — —
Escherichia coli ECOR27 0.36 NOLOHH_07635 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.14 NOLOHH_09890 argG argininosuccinate synthase — —
Escherichia coli ECRC62 0.36 BNILDI_03880 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.14 BNILDI_01645 argG argininosuccinate synthase — —
Escherichia coli BW25113 0.36 b3608 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (NCBI) 0.14 b3172 argG argininosuccinate synthase (NCBI) — —
Escherichia coli ECOR38 0.36 HEPCGN_14595 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.14 HEPCGN_16965 argG argininosuccinate synthase — —
Escherichia coli Nissle 1917 0.36 ECOLIN_RS20595 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.14 ECOLIN_RS18275 argininosuccinate synthase — —
Escherichia coli BL21 0.36 ECD_03466 glycerol-3-phosphate dehydrogenase (NAD+) 0.14 ECD_03038 argininosuccinate synthetase — —
Escherichia fergusonii Becca 0.36 EFB2_00202 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.14 EFB2_00651 Argininosuccinate synthase — —
Escherichia coli ECRC100 0.36 OKFHMN_15755 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.14 OKFHMN_18090 argG argininosuccinate synthase — —
Escherichia coli ECRC98 0.36 JDDGAC_19380 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.14 JDDGAC_21715 argG argininosuccinate synthase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.36 OHPLBJKB_00091 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.14 OHPLBJKB_00528 Argininosuccinate synthase — —
Escherichia coli ECRC99 0.36 KEDOAH_12395 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.14 KEDOAH_10060 argG argininosuccinate synthase — —
Mycobacterium tuberculosis H37Rv 0.35 Rv0564c Probable glycerol-3-phosphate dehydrogenase [NAD(P)+] GpdA1 (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) (NAD(P)H-dependent dihydroxyacetone-phosphate reductase) 0.34 Rv1658 Probable argininosuccinate synthase ArgG — —
Caulobacter crescentus NA1000 Δfur 0.35 CCNA_00068 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.67 CCNA_00128 argininosuccinate synthase — —
Caulobacter crescentus NA1000 0.35 CCNA_00068 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.67 CCNA_00128 argininosuccinate synthase — —
Vibrio cholerae E7946 ATCC 55056 0.35 CSW01_13405 glycerol-3-phosphate dehydrogenase (NAD(P)(+)) 0.47 CSW01_13370 argininosuccinate synthase — —
Pantoea sp. MT58 0.35 IAI47_00740 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.47 IAI47_00915 argininosuccinate synthase — —
Erwinia tracheiphila SCR3 0.34 LU632_RS21875 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.47 LU632_RS19605 argininosuccinate synthase low > 74
Brevundimonas sp. GW460-12-10-14-LB2 0.33 A4249_RS15450 NAD(P)-dependent glycerol-3-phosphate dehydrogenase 0.67 A4249_RS14275 argininosuccinate synthase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.31 Psyr_2022 Glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.74 Psyr_3892 argininosuccinate synthase — —
Pseudomonas syringae pv. syringae B728a 0.31 Psyr_2022 Glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.74 Psyr_3892 argininosuccinate synthase — —
Pseudomonas fluorescens GW456-L13 0.31 PfGW456L13_2046 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.74 PfGW456L13_1749 Argininosuccinate synthase (EC 6.3.4.5) 0.86 23
Pseudomonas stutzeri RCH2 0.31 Psest_2471 Glycerol-3-phosphate dehydrogenase 0.76 Psest_3121 argininosuccinate synthase — —
Pseudomonas fluorescens FW300-N2E3 0.31 AO353_01735 glycerol-3-phosphate dehydrogenase 0.74 AO353_04105 argininosuccinate synthase — —
Pseudomonas fluorescens SBW25-INTG 0.31 PFLU_RS09055 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.74 PFLU_RS05725 argininosuccinate synthase — —
Pseudomonas fluorescens SBW25 0.31 PFLU_RS09055 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.74 PFLU_RS05725 argininosuccinate synthase — —
Pseudomonas simiae WCS417 0.30 PS417_09000 glycerol-3-phosphate dehydrogenase 0.75 PS417_05640 argininosuccinate synthase — —
Pseudomonas sp. RS175 0.30 PFR28_03076 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.75 PFR28_03353 Argininosuccinate synthase — —
Pseudomonas fluorescens FW300-N2C3 0.30 AO356_19795 glycerol-3-phosphate dehydrogenase 0.75 AO356_18325 argininosuccinate synthase 0.89 16
Marinobacter adhaerens HP15 0.30 HP15_1762 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.74 HP15_2367 argininosuccinate synthase — —
Pseudomonas fluorescens FW300-N2E2 0.30 Pf6N2E2_5875 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.75 Pf6N2E2_5590 Argininosuccinate synthase (EC 6.3.4.5) — —
Agrobacterium fabrum C58 0.29 Atu2650 glycerol-3-phosphate dehydrogenase 0.64 Atu2667 argininosuccinate synthase — —
Dinoroseobacter shibae DFL-12 0.29 Dshi_3830 Glycerol-3-phosphate dehydrogenase (NAD(P)(+)) (RefSeq) 0.65 Dshi_3472 Argininosuccinate synthase (RefSeq) low > 64
Pseudomonas putida KT2440 0.29 PP_4169 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.76 PP_1088 Argininosuccinate synthase — —
Rhizobium sp. OAE497 0.29 ABIE40_RS18055 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.64 ABIE40_RS18150 argininosuccinate synthase — —
Phaeobacter inhibens DSM 17395 0.29 PGA1_c35480 glycerol-3-phosphate dehydrogenase GpsA 0.67 PGA1_c34920 argininosuccinate synthase ArgG — —
Pseudomonas sp. S08-1 0.28 OH686_00475 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.74 OH686_03930 argininosuccinate synthase 0.90 1
Sinorhizobium meliloti 1021 0.28 SMc03229 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.64 SMc03826 argininosuccinate synthase 0.68 72
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_3518 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.75 Pf1N1B4_742 Argininosuccinate synthase (EC 6.3.4.5) 0.60 43
Bosea sp. OAE506 0.27 ABIE41_RS05655 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.64 ABIE41_RS00340 argininosuccinate synthase — —
Synechococcus elongatus PCC 7942 0.27 Synpcc7942_2522 Glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.41 Synpcc7942_0009 argG argininosuccinate synthase — —
Rhodopseudomonas palustris CGA009 0.26 TX73_001320 NAD(P)-dependent glycerol-3-phosphate dehydrogenase 0.14 TX73_002040 argininosuccinate synthase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.25 Echvi_0322 Glycerol-3-phosphate dehydrogenase 0.19 Echvi_3846 argininosuccinate synthase — —
Bifidobacterium breve UCC2003 0.21 BBR_RS12080 NAD(P)-dependent glycerol-3-phosphate dehydrogenase 0.35 BBR_RS13915 argininosuccinate synthase — —
Bacteroides stercoris CC31F 0.20 HMPREF1181_RS08570 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.17 HMPREF1181_RS03460 argininosuccinate synthase — —
Bacteroides ovatus ATCC 8483 0.19 BACOVA_03234 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminal domain protein 0.17 BACOVA_03590 putative argininosuccinate synthase — —
Bacteroides thetaiotaomicron VPI-5482 0.19 BT2123 glycerol-3-phosphate dehydrogenase (NCBI ptt file) 0.17 BT3760 arginosuccinate synthetase (EC 6.3.4.5) (from data) — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.19 CA264_05630 glycerol-3-phosphate dehydrogenase 0.18 CA264_06255 argininosuccinate synthase low > 74
Mucilaginibacter yixingensis YX-36 DSM 26809 0.18 ABZR88_RS01515 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.19 ABZR88_RS15515 argininosuccinate synthase — —
Pedobacter sp. GW460-11-11-14-LB5 0.18 CA265_RS16375 glycerol-3-phosphate dehydrogenase 0.18 CA265_RS18545 argininosuccinate synthase — —
Parabacteroides merdae CL09T00C40 0.18 HMPREF1078_RS10070 glycerol-3-phosphate dehydrogenase 0.18 HMPREF1078_RS10575 argininosuccinate synthase — —
Phocaeicola dorei CL03T12C01 0.17 ABI39_RS21145 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.17 ABI39_RS02975 argininosuccinate synthase — —
Phocaeicola vulgatus CL09T03C04 0.17 HMPREF1058_RS07270 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.17 HMPREF1058_RS08845 argininosuccinate synthase — —

Not shown: 11 genomes with orthologs for BPHYT_RS02610 only; 4 genomes with orthologs for BPHYT_RS15920 only