| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Burkholderia phytofirmans PsJN | 1.0 | BPHYT_RS14125 | | transcriptional regulator | 1.0 | BPHYT_RS14120 | | chemotaxis protein CheY | 0.42 | 1 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.99 | H281DRAFT_04415 | | phosphate uptake regulator, PhoU | 1.00 | H281DRAFT_04416 | | two component transcriptional regulator, winged helix family | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.99 | ABIE53_002991 | | phosphate transport system protein | 1.00 | ABIE53_002990 | | two-component system phosphate regulon response regulator PhoB | low | > 113 |
| Paraburkholderia sabiae LMG 24235 | 0.93 | QEN71_RS04840 | | phosphate signaling complex protein PhoU | 1.00 | QEN71_RS04845 | | phosphate regulon transcriptional regulator PhoB | low | > 153 |
| Cupriavidus basilensis FW507-4G11 | 0.80 | RR42_RS13450 | | PhoU family transcriptional regulator | 0.86 | RR42_RS13445 | | chemotaxis protein CheY | low | > 128 |
| Ralstonia solanacearum PSI07 | 0.75 | RPSI07_RS15315 | | phosphate transport system regulatory protein PhoU | 0.84 | RPSI07_RS15320 | | phosphate regulon transcriptional regulatory protein PhoB | low | > 81 |
| Ralstonia sp. UNC404CL21Col | 0.74 | ABZR87_RS14080 | | phosphate signaling complex protein PhoU | 0.84 | ABZR87_RS14075 | | phosphate regulon transcriptional regulator PhoB | low | > 80 |
| Ralstonia solanacearum GMI1000 | 0.74 | RS_RS07690 | | phosphate transport system regulatory protein PhoU | 0.84 | RS_RS07695 | | phosphate regulon transcriptional regulatory protein PhoB | low | > 80 |
| Ralstonia solanacearum UW163 | 0.74 | UW163_RS15440 | | phosphate transport system regulatory protein PhoU | 0.85 | UW163_RS15435 | | phosphate regulon transcriptional regulatory protein PhoB | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.74 | RALBFv3_RS02130 | | phosphate transport system regulatory protein PhoU | 0.85 | RALBFv3_RS02125 | | phosphate regulon transcriptional regulatory protein PhoB | low | > 76 |
| Variovorax sp. SCN45 | 0.64 | GFF1096 | | Phosphate transport system regulatory protein PhoU | 0.58 | GFF1097 | | Phosphate regulon transcriptional regulatory protein PhoB (SphR) | low | > 127 |
| Variovorax sp. OAS795 | 0.64 | ABID97_RS14615 | | phosphate signaling complex protein PhoU | 0.58 | ABID97_RS14620 | | phosphate regulon transcriptional regulator PhoB | low | > 91 |
| Acidovorax sp. GW101-3H11 | 0.62 | Ac3H11_460 | | Phosphate transport system regulatory protein PhoU | 0.62 | Ac3H11_461 | | Phosphate regulon transcriptional regulatory protein PhoB (SphR) | low | > 79 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.58 | GFF4234 | | Phosphate transport system regulatory protein PhoU | 0.60 | GFF4235 | | Phosphate regulon transcriptional regulatory protein PhoB (SphR) | low | > 90 |
| Kangiella aquimarina DSM 16071 | 0.49 | B158DRAFT_0894 | | phosphate uptake regulator, PhoU | 0.51 | B158DRAFT_0895 | | phosphate regulon transcriptional regulatory protein PhoB | low | > 40 |
| Dechlorosoma suillum PS | 0.48 | Dsui_1573 | | phosphate transport system regulatory protein PhoU | 0.74 | Dsui_0863 | | phosphate regulon transcriptional regulatory protein PhoB | — | — |
| Castellaniella sp019104865 MT123 | 0.48 | ABCV34_RS02395 | | phosphate signaling complex protein PhoU | 0.63 | ABCV34_RS14470 | | phosphate regulon transcriptional regulator PhoB | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.48 | Psyr_5037 | | phosphate uptake regulator, PhoU | 0.56 | Psyr_5032 | | Response regulator receiver:Transcriptional regulatory protein, C-terminal | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.48 | Psyr_5037 | | phosphate uptake regulator, PhoU | 0.56 | Psyr_5032 | | Response regulator receiver:Transcriptional regulatory protein, C-terminal | — | — |
| Pseudomonas stutzeri RCH2 | 0.48 | Psest_0223 | | phosphate transport system regulatory protein PhoU | 0.56 | Psest_3845 | | phosphate regulon transcriptional regulatory protein PhoB | — | — |
| Pseudomonas sp. S08-1 | 0.48 | OH686_13430 | | phosphate transport system regulatory protein PhoU | 0.56 | OH686_13465 | | phosphate regulon transcriptional regulatory protein PhoB | low | > 80 |
| Pseudomonas fluorescens SBW25 | 0.47 | PFLU_RS29750 | | phosphate signaling complex protein PhoU | 0.56 | PFLU_RS29725 | | phosphate regulon transcriptional regulatory protein PhoB | low | > 109 |
| Shewanella amazonensis SB2B | 0.47 | Sama_1411 | | transcriptional regulator PhoU (RefSeq) | 0.59 | Sama_1074 | | response regulator receiver protein (RefSeq) | — | — |
| Herbaspirillum seropedicae SmR1 | 0.47 | HSERO_RS06330 | | transcriptional regulator | 0.48 | HSERO_RS06335 | | chemotaxis protein CheY | 0.29 | 27 |
| Pseudomonas fluorescens GW456-L13 | 0.47 | PfGW456L13_757 | | Phosphate transport system regulatory protein PhoU | 0.56 | PfGW456L13_762 | | Phosphate regulon transcriptional regulatory protein PhoB (SphR) | low | > 87 |
| Pseudomonas simiae WCS417 | 0.47 | PS417_28065 | | transcriptional regulator PhoU | 0.56 | PS417_28035 | | transcriptional regulator PhoB | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.47 | PFLU_RS29750 | | phosphate signaling complex protein PhoU | 0.56 | PFLU_RS29725 | | phosphate regulon transcriptional regulatory protein PhoB | low | > 109 |
| Pseudomonas putida KT2440 | 0.47 | PP_5325 | | phosphate transport-associated protein | 0.56 | PP_5320 | | two-component system DNA-binding transcriptional dual response regulator PhoB | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.47 | AO356_11025 | | transcriptional regulator PhoU | 0.56 | AO356_11000 | | phosphate regulon transcriptional regulatory protein PhoB | low | > 104 |
| Pseudomonas sp. RS175 | 0.47 | PFR28_04485 | | Phosphate-specific transport system accessory protein PhoU | 0.56 | PFR28_04479 | | Phosphate regulon transcriptional regulatory protein PhoB | low | > 88 |
| Pseudomonas fluorescens FW300-N2E3 | 0.47 | AO353_09885 | | transcriptional regulator PhoU | 0.56 | AO353_09855 | | phosphate regulon transcriptional regulatory protein PhoB | low | > 101 |
| Pseudomonas fluorescens FW300-N2E2 | 0.47 | Pf6N2E2_4071 | | Phosphate transport system regulatory protein PhoU | 0.56 | Pf6N2E2_4066 | | Phosphate regulon transcriptional regulatory protein PhoB (SphR) | low | > 103 |
| Pseudomonas fluorescens FW300-N1B4 | 0.47 | Pf1N1B4_2038 | | Phosphate transport system regulatory protein PhoU | 0.56 | Pf1N1B4_2044 | | Phosphate regulon transcriptional regulatory protein PhoB (SphR) | — | — |
| Shewanella sp. ANA-3 | 0.47 | Shewana3_2731 | | transcriptional regulator PhoU (RefSeq) | 0.59 | Shewana3_2879 | | two component transcriptional regulator (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.46 | SO1726 | phoU | phosphate transport system regulatory protein PhoU (NCBI ptt file) | 0.59 | SO1558 | phoB | phosphate regulon response regulator PhoB (NCBI ptt file) | — | — |
| Shewanella loihica PV-4 | 0.46 | Shew_1701 | | transcriptional regulator PhoU (RefSeq) | 0.60 | Shew_2749 | | two component transcriptional regulator (RefSeq) | — | — |
| Rahnella sp. WP5 | 0.45 | EX31_RS06050 | | phosphate signaling complex protein PhoU | 0.58 | EX31_RS22040 | | phosphate response regulator transcription factor PhoB | — | — |
| Erwinia tracheiphila SCR3 | 0.45 | LU632_RS24900 | phoU | phosphate signaling complex protein PhoU | 0.56 | LU632_RS18925 | phoB | phosphate response regulator transcription factor PhoB | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.45 | CSW01_03800 | | phosphate transport system regulator PhoU | 0.59 | CSW01_03760 | | phosphate regulon transcriptional regulatory protein PhoB | — | — |
| Pectobacterium carotovorum WPP14 | 0.45 | HER17_RS21695 | | phosphate signaling complex protein PhoU | 0.59 | HER17_RS16040 | | phosphate response regulator transcription factor PhoB | — | — |
| Pantoea sp. MT58 | 0.45 | IAI47_00215 | | phosphate signaling complex protein PhoU | 0.58 | IAI47_14855 | | phosphate response regulator transcription factor PhoB | — | — |
| Dickeya dianthicola 67-19 | 0.44 | HGI48_RS21580 | | phosphate signaling complex protein PhoU | 0.58 | HGI48_RS05485 | | phosphate response regulator transcription factor PhoB | — | — |
| Dickeya dianthicola ME23 | 0.44 | DZA65_RS22560 | | phosphate signaling complex protein PhoU | 0.58 | DZA65_RS05810 | | phosphate response regulator transcription factor PhoB | — | — |
| Serratia liquefaciens MT49 | 0.44 | IAI46_25195 | | phosphate signaling complex protein PhoU | 0.60 | IAI46_04775 | | phosphate response regulator transcription factor PhoB | low | > 86 |
| Escherichia coli BW25113 | 0.43 | b3724 | phoU | negative regulator of PhoR/PhoB two-component regulator (NCBI) | 0.59 | b0399 | phoB | DNA-binding response regulator in two-component regulatory system with PhoR (or CreC) (NCBI) | — | — |
| Escherichia coli ECOR38 | 0.43 | HEPCGN_13610 | phoU | phosphate signaling complex protein PhoU | 0.59 | HEPCGN_07185 | phoB | phosphate response regulator transcription factor PhoB | — | — |
| Escherichia coli ECRC62 | 0.43 | BNILDI_04495 | pstA | phosphate ABC transporter permease PstA | 0.59 | BNILDI_22890 | phoB | phosphate response regulator transcription factor PhoB | — | — |
| Escherichia coli ECRC98 | 0.43 | JDDGAC_18520 | phoU | phosphate signaling complex protein PhoU | 0.59 | JDDGAC_12200 | phoB | phosphate response regulator transcription factor PhoB | — | — |
| Escherichia coli ECRC100 | 0.43 | OKFHMN_14900 | phoU | phosphate signaling complex protein PhoU | 0.59 | OKFHMN_08545 | phoB | phosphate response regulator transcription factor PhoB | — | — |
| Escherichia coli Nissle 1917 | 0.43 | ECOLIN_RS21430 | | phosphate signaling complex protein PhoU | 0.59 | ECOLIN_RS02410 | | phosphate response regulator transcription factor PhoB | — | — |
| Escherichia coli ECRC102 | 0.43 | NIAGMN_12655 | phoU | phosphate signaling complex protein PhoU | 0.59 | NIAGMN_06600 | phoB | phosphate response regulator transcription factor PhoB | — | — |
| Marinobacter adhaerens HP15 | 0.43 | HP15_3385 | | phosphate uptake regulator, PhoU | 0.54 | HP15_3354 | | two component transcriptional regulator, winged helix family | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.43 | OHPLBJKB_04329 | | Phosphate-specific transport system accessory protein PhoU | 0.59 | OHPLBJKB_03277 | | Phosphate regulon transcriptional regulatory protein PhoB | — | — |
| Dickeya dadantii 3937 | 0.43 | DDA3937_RS21450 | | phosphate signaling complex protein PhoU | 0.58 | DDA3937_RS05425 | | phosphate response regulator transcription factor PhoB | — | — |
| Escherichia coli ECRC99 | 0.43 | KEDOAH_13250 | phoU | phosphate signaling complex protein PhoU | 0.59 | KEDOAH_19420 | phoB | phosphate response regulator transcription factor PhoB | — | — |
| Escherichia coli BL21 | 0.43 | ECD_03608 | | negative regulator of PhoR/PhoB two-component regulator | 0.59 | ECD_00347 | | response regulator in two-component regulatory system with PhoR | — | — |
| Escherichia coli ECOR27 | 0.43 | NOLOHH_07030 | pstA | phosphate ABC transporter permease PstA | 0.59 | NOLOHH_01475 | phoB | phosphate response regulator transcription factor PhoB | — | — |
| Escherichia coli ECRC101 | 0.43 | MCAODC_05405 | phoU | phosphate signaling complex protein PhoU | 0.59 | MCAODC_27770 | phoB | phosphate response regulator transcription factor PhoB | — | — |
| Escherichia fergusonii Becca | 0.43 | EFB2_04909 | | Phosphate-specific transport system accessory protein PhoU | 0.59 | EFB2_03658 | | Phosphate regulon transcriptional regulatory protein PhoB | — | — |
| Klebsiella michiganensis M5al | 0.43 | BWI76_RS00140 | | phosphate transport system regulator PhoU | 0.58 | BWI76_RS06230 | | DNA-binding response regulator | low | > 92 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.43 | GFF1738 | | Phosphate transport system regulatory protein PhoU | 0.58 | GFF4296 | | Phosphate regulon transcriptional regulatory protein PhoB (SphR) | — | — |
| Enterobacter sp. TBS_079 | 0.43 | MPMX20_04643 | | Phosphate-specific transport system accessory protein PhoU | 0.58 | MPMX20_00986 | | Phosphate regulon transcriptional regulatory protein PhoB | — | — |
| Enterobacter asburiae PDN3 | 0.43 | EX28DRAFT_4000 | | phosphate transport system regulatory protein PhoU | 0.58 | EX28DRAFT_2575 | | phosphate regulon transcriptional regulatory protein PhoB | — | — |
| Acinetobacter radioresistens SK82 | 0.42 | MPMX26_00183 | | Phosphate-specific transport system accessory protein PhoU | 0.52 | MPMX26_02958 | | Phosphate regulon transcriptional regulatory protein PhoB | low | > 36 |
| Alteromonas macleodii MIT1002 | 0.37 | MIT1002_00877 | | Repressor protein PhoU | 0.59 | MIT1002_00751 | | Phosphate regulon transcriptional regulatory protein PhoB | low | > 70 |
| Phaeobacter inhibens DSM 17395 | 0.33 | PGA1_c15740 | | phosphate transport system protein PhoU | 0.44 | PGA1_c15730 | | phosphate regulon transcriptional regulatory protein PhoB | low | > 62 |
| Dinoroseobacter shibae DFL-12 | 0.33 | Dshi_1537 | | phosphate uptake regulator, PhoU (RefSeq) | 0.44 | Dshi_1538 | | two component transcriptional regulator, winged helix family (RefSeq) | — | — |
| Rhodospirillum rubrum S1H | 0.32 | Rru_A0602 | | Phosphate uptake regulator, PhoU (NCBI) | 0.45 | Rru_A0603 | | Two component Transcriptional regulator, Winged helix family (NCBI) | low | > 58 |
| Rhodopseudomonas palustris CGA009 | 0.31 | TX73_024825 | | phosphate signaling complex protein PhoU | 0.46 | TX73_024820 | | phosphate regulon transcriptional regulator PhoB | — | — |
| Azospirillum sp. SherDot2 | 0.31 | MPMX19_04813 | | Phosphate-specific transport system accessory protein PhoU | 0.45 | MPMX19_02587 | | Phosphate regulon transcriptional regulatory protein PhoB | low | > 112 |
| Rhizobium sp. OAE497 | 0.30 | ABIE40_RS02305 | | phosphate signaling complex protein PhoU | 0.46 | ABIE40_RS02310 | | phosphate regulon transcriptional regulator PhoB | low | > 107 |
| Sinorhizobium meliloti 1021 | 0.30 | SMc02141 | | phosphate transporter PhoU | 0.47 | SMc02140 | | phosphate regulon transcriptional regulatory protein | 0.62 | 2 |
| Azospirillum brasilense Sp245 | 0.30 | AZOBR_RS08185 | | PhoU family transcriptional regulator | 0.46 | AZOBR_RS01105 | | PhoB family transcriptional regulator | low | > 97 |
| Bosea sp. OAE506 | 0.30 | ABIE41_RS08905 | | phosphate signaling complex protein PhoU | 0.45 | ABIE41_RS08910 | | phosphate regulon transcriptional regulator PhoB | low | > 77 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.29 | A4249_RS08975 | | phosphate signaling complex protein PhoU | 0.46 | A4249_RS08970 | | phosphate regulon transcriptional regulator PhoB | — | — |
| Agrobacterium fabrum C58 | 0.29 | Atu0424 | | phosphate transport system regulatory protein | 0.47 | Atu0425 | | two component response regulator | — | — |
| Caulobacter crescentus NA1000 | 0.29 | CCNA_00295 | | phosphate transport system protein phoU | 0.46 | CCNA_00296 | | phosphate regulon response regulator PhoB | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.29 | CCNA_00295 | | phosphate transport system protein phoU | 0.46 | CCNA_00296 | | phosphate regulon response regulator PhoB | — | — |
| Rhodanobacter sp. FW510-T8 | 0.28 | OKGIIK_06835 | phoU | phosphate signaling complex protein PhoU | 0.53 | OKGIIK_03790 | phoB | phosphate regulon transcriptional regulator PhoB | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.28 | Ga0059261_3652 | | phosphate transport system regulatory protein PhoU | 0.42 | Ga0059261_3651 | | phosphate regulon transcriptional regulatory protein PhoB | — | — |
| Magnetospirillum magneticum AMB-1 | 0.28 | AMB_RS06940 | | phosphate transport system regulatory protein PhoU | 0.46 | AMB_RS06935 | | phosphate regulon transcriptional regulatory protein PhoB | low | > 64 |
| Dyella japonica UNC79MFTsu3.2 | 0.28 | ABZR86_RS08250 | | phosphate signaling complex protein PhoU | 0.52 | ABZR86_RS00720 | | phosphate regulon transcriptional regulator PhoB | low | > 74 |
| Rhodanobacter denitrificans FW104-10B01 | 0.27 | LRK54_RS00475 | | phosphate signaling complex protein PhoU | 0.53 | LRK54_RS15030 | | phosphate regulon transcriptional regulator PhoB | — | — |
| Rhodanobacter denitrificans MT42 | 0.27 | LRK55_RS00215 | | phosphate signaling complex protein PhoU | 0.53 | LRK55_RS14745 | | phosphate regulon transcriptional regulator PhoB | low | > 63 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.25 | Xcc-8004.3364.1 | | Phosphate transport system regulatory protein PhoU | 0.55 | Xcc-8004.4062.1 | | Phosphate regulon transcriptional regulatory protein PhoB (SphR) | 0.30 | 56 |
| Lysobacter sp. OAE881 | 0.25 | ABIE51_RS07525 | | phosphate signaling complex protein PhoU | 0.58 | ABIE51_RS14220 | | phosphate regulon transcriptional regulator PhoB | low | > 62 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.24 | CA264_18725 | | phosphate transport system regulatory protein PhoU | 0.33 | CA264_19685 | | DNA-binding response regulator | low | > 74 |
| Desulfovibrio vulgaris Miyazaki F | 0.24 | DvMF_0880 | | phosphate uptake regulator, PhoU (RefSeq) | 0.37 | DvMF_0882 | | two component transcriptional regulator, winged helix family (RefSeq) | low | > 51 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.23 | DVU1085 | phoU | phosphate transport system protein PhoU (TIGR) | 0.36 | DVU1083 | phoB | phosphate regulon transcriptional regulator PhoB (TIGR) | — | — |
| Parabacteroides merdae CL09T00C40 | 0.22 | HMPREF1078_RS17190 | | phosphate signaling complex protein PhoU | 0.31 | HMPREF1078_RS09515 | | response regulator transcription factor | low | > 61 |
| Bacteroides ovatus ATCC 8483 | 0.21 | BACOVA_00605 | | phosphate transport system regulatory protein PhoU | 0.30 | BACOVA_04215 | | response regulator receiver domain protein | low | > 94 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.21 | BT1320 | | putative transcriptional regulator, phosphate uptake regulation (NCBI ptt file) | 0.30 | BT1482 | | two-component system response regulator (NCBI ptt file) | low | > 81 |
| Bacteroides stercoris CC31F | 0.20 | HMPREF1181_RS10820 | | phosphate signaling complex protein PhoU | 0.30 | HMPREF1181_RS04745 | | response regulator transcription factor | low | > 56 |
| Phocaeicola dorei CL03T12C01 | 0.19 | ABI39_RS20360 | | phosphate signaling complex protein PhoU | 0.31 | ABI39_RS21085 | | response regulator transcription factor | low | > 72 |
| Phocaeicola vulgatus CL09T03C04 | 0.19 | HMPREF1058_RS06565 | | phosphate signaling complex protein PhoU | 0.31 | HMPREF1058_RS07210 | | response regulator transcription factor | low | > 67 |
Not shown: 4 genomes with orthologs for BPHYT_RS14125 only; 3 genomes with orthologs for BPHYT_RS14120 only