Conservation of cofitness between BPHYT_RS33900 and BPHYT_RS06545 in Burkholderia phytofirmans PsJN

94 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS33900 3-isopropylmalate dehydrogenase 1.0 BPHYT_RS06545 acetolactate synthase 0.95 4
Paraburkholderia graminis OAS925 0.98 ABIE53_004804 3-isopropylmalate dehydrogenase 0.99 ABIE53_001574 acetolactate synthase-1/2/3 large subunit
Paraburkholderia bryophila 376MFSha3.1 0.98 H281DRAFT_06072 3-isopropylmalate dehydrogenase 0.99 H281DRAFT_04551 acetolactate synthase, large subunit
Paraburkholderia sabiae LMG 24235 0.96 QEN71_RS17620 3-isopropylmalate dehydrogenase 0.97 QEN71_RS24225 acetolactate synthase 3 catalytic subunit 0.81 10
Ralstonia sp. UNC404CL21Col 0.89 ABZR87_RS14530 3-isopropylmalate dehydrogenase 0.81 ABZR87_RS14955 acetolactate synthase 3 catalytic subunit 0.66 45
Cupriavidus basilensis FW507-4G11 0.89 RR42_RS14385 3-isopropylmalate dehydrogenase 0.80 RR42_RS05435 acetolactate synthase 3 catalytic subunit
Ralstonia solanacearum PSI07 0.89 RPSI07_RS14705 3-isopropylmalate dehydrogenase 0.82 RPSI07_RS14255 acetolactate synthase, large subunit, biosynthetic type
Ralstonia solanacearum GMI1000 0.89 RS_RS09990 3-isopropylmalate dehydrogenase 0.81 RS_RS10420 acetolactate synthase 3 large subunit
Ralstonia solanacearum IBSBF1503 0.89 RALBFv3_RS02610 3-isopropylmalate dehydrogenase 0.82 RALBFv3_RS03050 acetolactate synthase 3 large subunit
Ralstonia solanacearum UW163 0.89 UW163_RS11115 3-isopropylmalate dehydrogenase 0.82 UW163_RS10675 acetolactate synthase 3 large subunit
Herbaspirillum seropedicae SmR1 0.86 HSERO_RS16500 3-isopropylmalate dehydrogenase 0.74 HSERO_RS08650 acetolactate synthase 0.95 4
Variovorax sp. SCN45 0.79 GFF3888 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.73 GFF1158 Acetolactate synthase large subunit (EC 2.2.1.6)
Acidovorax sp. GW101-3H11 0.79 Ac3H11_1528 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.72 Ac3H11_525 Acetolactate synthase large subunit (EC 2.2.1.6) 0.74 44
Variovorax sp. OAS795 0.79 ABID97_RS08455 3-isopropylmalate dehydrogenase 0.72 ABID97_RS14885 acetolactate synthase 3 catalytic subunit
Hydrogenophaga sp. GW460-11-11-14-LB1 0.77 GFF3360 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.74 GFF4276 Acetolactate synthase large subunit (EC 2.2.1.6)
Castellaniella sp019104865 MT123 0.75 ABCV34_RS04280 3-isopropylmalate dehydrogenase 0.70 ABCV34_RS01210 acetolactate synthase 3 catalytic subunit 0.56 8
Dechlorosoma suillum PS 0.68 Dsui_3198 3-isopropylmalate dehydrogenase 0.68 Dsui_3529 acetolactate synthase, large subunit, biosynthetic type
Pseudomonas fluorescens FW300-N2E3 0.65 AO353_20635 3-isopropylmalate dehydrogenase 0.57 AO353_14495 acetolactate synthase 3 catalytic subunit 0.86 30
Pseudomonas fluorescens FW300-N1B4 0.65 Pf1N1B4_12 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.57 Pf1N1B4_2878 Acetolactate synthase large subunit (EC 2.2.1.6) 0.83 24
Pseudomonas fluorescens FW300-N2C3 0.64 AO356_21415 3-isopropylmalate dehydrogenase 0.56 AO356_16170 acetolactate synthase 3 catalytic subunit 0.95 10
Pseudomonas fluorescens FW300-N2E2 0.64 Pf6N2E2_66 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.56 Pf6N2E2_5175 Acetolactate synthase large subunit (EC 2.2.1.6) 0.92 12
Pseudomonas putida KT2440 0.64 PP_1988 3-isopropylmalate dehydrogenase 0.57 PP_4680 acetohydroxybutanoate synthase / acetolactate synthase 0.94 3
Pseudomonas fluorescens GW456-L13 0.64 PfGW456L13_3945 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.56 PfGW456L13_1538 Acetolactate synthase large subunit (EC 2.2.1.6) 0.95 8
Pseudomonas sp. RS175 0.64 PFR28_02821 3-isopropylmalate dehydrogenase 0.57 PFR28_03699 Acetolactate synthase isozyme 3 large subunit 0.68 16
Marinobacter adhaerens HP15 0.64 HP15_1832 3-isopropylmalate dehydrogenase 0.59 HP15_531 acetolactate synthase, large subunit, biosynthetic type 0.83 16
Pseudomonas simiae WCS417 0.64 PS417_18585 3-isopropylmalate dehydrogenase 0.57 PS417_23810 acetolactate synthase 3 catalytic subunit 0.92 7
Pseudomonas fluorescens SBW25-INTG 0.63 PFLU_RS20565 3-isopropylmalate dehydrogenase 0.57 PFLU_RS25650 acetolactate synthase 3 large subunit
Pseudomonas fluorescens SBW25 0.63 PFLU_RS20565 3-isopropylmalate dehydrogenase 0.57 PFLU_RS25650 acetolactate synthase 3 large subunit
Pseudomonas stutzeri RCH2 0.63 Psest_2589 3-isopropylmalate dehydrogenase 0.58 Psest_1036 acetolactate synthase, large subunit, biosynthetic type
Pseudomonas syringae pv. syringae B728a 0.63 Psyr_1985 3-isopropylmalate dehydrogenase 0.58 Psyr_0846 acetolactate synthase, large subunit 0.91 11
Pseudomonas syringae pv. syringae B728a ΔmexB 0.63 Psyr_1985 3-isopropylmalate dehydrogenase 0.58 Psyr_0846 acetolactate synthase, large subunit 0.89 20
Pseudomonas sp. S08-1 0.62 OH686_04470 3-isopropylmalate dehydrogenase 0.58 OH686_08130 acetolactate synthase, large subunit, biosynthetic type 0.96 1
Sphingomonas koreensis DSMZ 15582 0.60 Ga0059261_3190 3-isopropylmalate dehydrogenase 0.48 Ga0059261_0068 acetolactate synthase, large subunit (EC 2.2.1.6) 0.97 3
Xanthomonas campestris pv. campestris strain 8004 0.60 Xcc-8004.1053.1 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.35 Xcc-8004.1059.1 Acetolactate synthase large subunit (EC 2.2.1.6) 0.85 21
Acinetobacter radioresistens SK82 0.59 MPMX26_00348 3-isopropylmalate dehydrogenase 0.56 MPMX26_00472 Acetolactate synthase isozyme 3 large subunit 0.99 4
Desulfovibrio vulgaris Miyazaki F 0.57 DvMF_1794 3-isopropylmalate dehydrogenase (RefSeq) 0.50 DvMF_0153 acetolactate synthase, large subunit, biosynthetic type (RefSeq) 0.90 23
Synechococcus elongatus PCC 7942 0.56 Synpcc7942_1505 leuB 3-isopropylmalate dehydrogenase 0.47 Synpcc7942_0139 ilvB acetolactate synthase 3 catalytic subunit
Desulfovibrio vulgaris Hildenborough JW710 0.54 DVU2985 leuB 3-isopropylmalate dehydrogenase (TIGR) 0.51 DVU1376 ilvB-2 acetolactate synthase, large subunit, biosynthetic type (TIGR) 0.93 7
Phaeobacter inhibens DSM 17395 0.54 PGA1_c29830 3-isopropylmalate dehydrogenase LeuB 0.49 PGA1_c20210 acetolactate synthase isozyme 3 large subunit 0.91 7
Dinoroseobacter shibae DFL-12 0.52 Dshi_0081 3-isopropylmalate dehydrogenase (RefSeq) 0.50 Dshi_1779 acetolactate synthase, large subunit, biosynthetic type (RefSeq)
Magnetospirillum magneticum AMB-1 0.52 AMB_RS20570 3-isopropylmalate dehydrogenase 0.54 AMB_RS17740 acetolactate synthase 3 large subunit
Rhizobium sp. OAE497 0.52 ABIE40_RS19050 3-isopropylmalate dehydrogenase 0.54 ABIE40_RS11495 acetolactate synthase 3 large subunit 0.89 52
Serratia liquefaciens MT49 0.51 IAI46_03350 3-isopropylmalate dehydrogenase 0.56 IAI46_03375 acetolactate synthase 3 large subunit low > 86
Azospirillum sp. SherDot2 0.51 MPMX19_00607 3-isopropylmalate dehydrogenase 0.54 MPMX19_01776 Acetolactate synthase isozyme 3 large subunit
Bosea sp. OAE506 0.51 ABIE41_RS11860 3-isopropylmalate dehydrogenase 0.52 ABIE41_RS12890 acetolactate synthase 3 large subunit
Rhodospirillum rubrum S1H 0.51 Rru_A1191 3-isopropylmalate dehydrogenase (NCBI) 0.53 Rru_A0467 Acetolactate synthase, large subunit, biosynthetic type (NCBI) 0.87 19
Alteromonas macleodii MIT1002 0.51 MIT1002_00948 3-isopropylmalate dehydrogenase 0.54 MIT1002_00503 Acetolactate synthase isozyme 3 large subunit 0.98 12
Sinorhizobium meliloti 1021 0.50 SMc04405 3-isopropylmalate dehydrogenase 0.53 SMc01431 acetolactate synthase 3 catalytic subunit 0.97 9
Klebsiella michiganensis M5al 0.50 BWI76_RS04675 3-isopropylmalate dehydrogenase 0.55 BWI76_RS04695 acetolactate synthase 3 large subunit low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.50 GFF165 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.54 GFF161 Acetolactate synthase large subunit (EC 2.2.1.6) low > 78
Rahnella sp. WP5 0.50 EX31_RS03685 3-isopropylmalate dehydrogenase 0.55 EX31_RS03665 acetolactate synthase 3 large subunit low > 89
Dickeya dianthicola ME23 0.50 DZA65_RS19205 3-isopropylmalate dehydrogenase 0.56 DZA65_RS19185 acetolactate synthase 3 large subunit low > 75
Pectobacterium carotovorum WPP14 0.49 HER17_RS03080 3-isopropylmalate dehydrogenase 0.56 HER17_RS03095 acetolactate synthase 3 large subunit low > 75
Dickeya dadantii 3937 0.49 DDA3937_RS18120 3-isopropylmalate dehydrogenase 0.56 DDA3937_RS18105 acetolactate synthase 3 large subunit low > 74
Enterobacter sp. TBS_079 0.49 MPMX20_00768 3-isopropylmalate dehydrogenase 0.55 MPMX20_00771 Acetolactate synthase isozyme 3 large subunit low > 85
Agrobacterium fabrum C58 0.49 Atu2791 3-isopropylmalate dehydrogenase 0.52 Atu2036 acetolactate synthase III, large subunit 0.88 35
Dickeya dianthicola 67-19 0.49 HGI48_RS18060 3-isopropylmalate dehydrogenase 0.56 HGI48_RS18040 acetolactate synthase 3 large subunit low > 71
Enterobacter asburiae PDN3 0.49 EX28DRAFT_3669 3-isopropylmalate dehydrogenase 0.55 EX28DRAFT_3673 acetolactate synthase, large subunit (EC 2.2.1.6) low > 76
Azospirillum brasilense Sp245 0.49 AZOBR_RS14130 3-isopropylmalate dehydrogenase 0.55 AZOBR_RS06560 acetolactate synthase low > 97
Escherichia fergusonii Becca 0.49 EFB2_03972 3-isopropylmalate dehydrogenase 0.55 EFB2_03969 Acetolactate synthase isozyme 3 large subunit low > 86
Escherichia coli Nissle 1917 0.49 ECOLIN_RS00395 3-isopropylmalate dehydrogenase 0.55 ECOLIN_RS00415 acetolactate synthase 3 large subunit low > 55
Escherichia coli ECOR38 0.49 HEPCGN_08700 leuB 3-isopropylmalate dehydrogenase 0.55 HEPCGN_08680 ilvI acetolactate synthase 3 large subunit low > 87
Escherichia coli ECRC102 0.49 NIAGMN_08570 leuB 3-isopropylmalate dehydrogenase 0.55 NIAGMN_08550 ilvI acetolactate synthase 3 large subunit
Escherichia coli ECRC98 0.49 JDDGAC_14315 leuB 3-isopropylmalate dehydrogenase 0.55 JDDGAC_14295 ilvI acetolactate synthase 3 large subunit low > 86
Escherichia coli ECRC101 0.49 MCAODC_01235 leuB 3-isopropylmalate dehydrogenase 0.55 MCAODC_01215 ilvI acetolactate synthase 3 large subunit low > 87
Escherichia coli ECRC100 0.49 OKFHMN_10720 leuB 3-isopropylmalate dehydrogenase 0.55 OKFHMN_10700 ilvI acetolactate synthase 3 large subunit low > 80
Escherichia coli ECRC99 0.49 KEDOAH_17435 leuB 3-isopropylmalate dehydrogenase 0.55 KEDOAH_17455 ilvI acetolactate synthase 3 large subunit
Escherichia coli BL21 0.49 ECD_00075 3-isopropylmalate dehydrogenase, NAD(+)-dependent 0.55 ECD_00079 acetolactate synthase 3 large subunit low > 61
Escherichia coli BW25113 0.49 b0073 leuB 3-isopropylmalate dehydrogenase (VIMSS) 0.55 b0077 ilvI acetolactate synthase III large subunit (NCBI) low > 76
Escherichia coli ECOR27 0.49 NOLOHH_03065 leuA 2-isopropylmalate synthase 0.55 NOLOHH_03045 ilvI acetolactate synthase 3 large subunit low > 75
Escherichia coli ECRC62 0.49 BNILDI_08545 leuA 2-isopropylmalate synthase 0.55 BNILDI_08565 ilvI acetolactate synthase 3 large subunit low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.49 OHPLBJKB_03584 3-isopropylmalate dehydrogenase 0.55 OHPLBJKB_03581 Acetolactate synthase isozyme 3 large subunit low > 73
Vibrio cholerae E7946 ATCC 55056 0.49 CSW01_12600 3-isopropylmalate dehydrogenase 0.56 CSW01_12565 acetolactate synthase 3 large subunit low > 62
Shewanella loihica PV-4 0.48 Shew_3471 3-isopropylmalate dehydrogenase (RefSeq) 0.56 Shew_1776 acetolactate synthase 3 catalytic subunit (RefSeq) low > 60
Shewanella oneidensis MR-1 0.48 SO4235 leuB 3-isopropylmalate dehydrogenase (NCBI ptt file) 0.57 SO2279 ilvI acetolactate synthase III, large subunit (NCBI ptt file) low > 76
Rhodopseudomonas palustris CGA009 0.48 TX73_001175 3-isopropylmalate dehydrogenase 0.52 TX73_010465 acetolactate synthase 3 large subunit
Shewanella sp. ANA-3 0.48 Shewana3_3760 3-isopropylmalate dehydrogenase (RefSeq) 0.57 Shewana3_2269 acetolactate synthase 3 catalytic subunit (RefSeq) low > 73
Pedobacter sp. GW460-11-11-14-LB5 0.48 CA265_RS15850 3-isopropylmalate dehydrogenase 0.36 CA265_RS15805 acetolactate synthase, large subunit, biosynthetic type 0.94 10
Caulobacter crescentus NA1000 Δfur 0.48 CCNA_00193 3-isopropylmalate dehydrogenase 0.55 CCNA_02185 acetolactate synthase large subunit low > 67
Caulobacter crescentus NA1000 0.48 CCNA_00193 3-isopropylmalate dehydrogenase 0.55 CCNA_02185 acetolactate synthase large subunit 0.92 27
Pantoea sp. MT58 0.47 IAI47_16005 3-isopropylmalate dehydrogenase 0.55 IAI47_15990 acetolactate synthase 3 large subunit low > 76
Erwinia tracheiphila SCR3 0.47 LU632_RS02875 leuB 3-isopropylmalate dehydrogenase 0.57 LU632_RS02885 ilvI acetolactate synthase 3 large subunit low > 74
Mucilaginibacter yixingensis YX-36 DSM 26809 0.47 ABZR88_RS11605 3-isopropylmalate dehydrogenase 0.37 ABZR88_RS11580 biosynthetic-type acetolactate synthase large subunit
Shewanella amazonensis SB2B 0.47 Sama_0336 3-isopropylmalate dehydrogenase (RefSeq) 0.56 Sama_2018 acetolactate synthase 3 catalytic subunit (RefSeq) low > 62
Lysobacter sp. OAE881 0.44 ABIE51_RS17585 3-isopropylmalate dehydrogenase 0.39 ABIE51_RS17550 acetolactate synthase 2 catalytic subunit 0.96 33
Echinicola vietnamensis KMM 6221, DSM 17526 0.44 Echvi_2062 3-isopropylmalate dehydrogenase 0.38 Echvi_2056 acetolactate synthase, large subunit, biosynthetic type
Pontibacter actiniarum KMM 6156, DSM 19842 0.43 CA264_09445 3-isopropylmalate dehydrogenase 0.36 CA264_06930 acetolactate synthase, large subunit, biosynthetic type low > 74
Brevundimonas sp. GW460-12-10-14-LB2 0.42 A4249_RS09995 3-isopropylmalate dehydrogenase 0.36 A4249_RS10020 acetolactate synthase 2 catalytic subunit 0.99 28
Parabacteroides merdae CL09T00C40 0.40 HMPREF1078_RS16640 3-isopropylmalate dehydrogenase 0.37 HMPREF1078_RS16690 biosynthetic-type acetolactate synthase large subunit 0.94 26
Phocaeicola vulgatus CL09T03C04 0.39 HMPREF1058_RS14565 3-isopropylmalate dehydrogenase 0.36 HMPREF1058_RS16820 biosynthetic-type acetolactate synthase large subunit low > 67
Phocaeicola dorei CL03T12C01 0.39 ABI39_RS10215 3-isopropylmalate dehydrogenase 0.36 ABI39_RS12720 biosynthetic-type acetolactate synthase large subunit 0.90 4
Bacteroides ovatus ATCC 8483 0.39 BACOVA_04600 3-isopropylmalate dehydrogenase 0.36 BACOVA_03303 acetolactate synthase, large subunit, biosynthetic type 0.98 5
Bacteroides stercoris CC31F 0.39 HMPREF1181_RS14125 3-isopropylmalate dehydrogenase 0.37 HMPREF1181_RS08330 biosynthetic-type acetolactate synthase large subunit 0.93 5
Bacteroides thetaiotaomicron VPI-5482 0.39 BT1857 3-isopropylmalate dehydrogenase (NCBI ptt file) 0.37 BT2077 acetolactate synthase large subunit (NCBI ptt file) 0.90 8
Methanococcus maripaludis S2 0.30 MMP_RS04575 homoisocitrate dehydrogenase 0.39 MMP_RS03415 acetolactate synthase large subunit

Not shown: 5 genomes with orthologs for BPHYT_RS33900 only; 3 genomes with orthologs for BPHYT_RS06545 only