Conservation of cofitness between BNILDI_11900 and BNILDI_13255 in Escherichia coli ECRC62

91 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC62 1.0 BNILDI_11900 pdxJ pyridoxine 5'-phosphate synthase 1.0 BNILDI_13255 purF amidophosphoribosyltransferase 0.87 14
Escherichia coli ECRC100 1.00 OKFHMN_21425 pdxJ pyridoxine 5'-phosphate synthase 1.00 OKFHMN_22715 purF amidophosphoribosyltransferase 0.74 26
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01143 'Pyridoxine 5'-phosphate synthase' transl_table=11 0.99 OHPLBJKB_01393 Amidophosphoribosyltransferase low > 73
Escherichia coli ECRC102 1.00 NIAGMN_19195 pdxJ pyridoxine 5'-phosphate synthase 1.00 NIAGMN_20485 purF amidophosphoribosyltransferase — —
Escherichia coli BL21 1.00 ECD_02458 pyridoxine 5'-phosphate synthase 1.00 ECD_02237 amidophosphoribosyltransferase — —
Escherichia coli ECRC98 1.00 JDDGAC_25090 pdxJ pyridoxine 5'-phosphate synthase 1.00 JDDGAC_26675 purF amidophosphoribosyltransferase — —
Escherichia coli ECRC101 1.00 MCAODC_11955 pdxJ pyridoxine 5'-phosphate synthase 1.00 MCAODC_13755 purF amidophosphoribosyltransferase low > 87
Escherichia coli BW25113 1.00 b2564 pdxJ pyridoxal phosphate biosynthetic protein (NCBI) 1.00 b2312 purF amidophosphoribosyltransferase (NCBI) 0.54 39
Escherichia coli ECOR27 1.00 NOLOHH_13100 pdxJ pyridoxine 5'-phosphate synthase 1.00 NOLOHH_14335 purF amidophosphoribosyltransferase 0.61 66
Escherichia coli ECRC99 1.00 KEDOAH_06795 pdxJ pyridoxine 5'-phosphate synthase 1.00 KEDOAH_05480 purF amidophosphoribosyltransferase — —
Escherichia coli ECOR38 0.99 HEPCGN_20570 pdxJ pyridoxine 5'-phosphate synthase 1.00 HEPCGN_21910 purF amidophosphoribosyltransferase 0.90 2
Escherichia fergusonii Becca 0.99 EFB2_01332 Pyridoxine 5'-phosphate synthase 1.00 EFB2_01546 Amidophosphoribosyltransferase low > 86
Escherichia coli Nissle 1917 0.98 ECOLIN_RS14515 pyridoxine 5'-phosphate synthase 1.00 ECOLIN_RS13405 amidophosphoribosyltransferase — —
Klebsiella michiganensis M5al 0.94 BWI76_RS21305 pyridoxine 5'-phosphate synthase 0.97 BWI76_RS20350 amidophosphoribosyltransferase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.94 GFF2472 'Pyridoxine 5'-phosphate synthase (EC 2.6.99.2)' transl_table=11 0.96 GFF1927 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Enterobacter asburiae PDN3 0.93 EX28DRAFT_0082 pyridoxine 5'-phosphate synthase 0.96 EX28DRAFT_0292 amidophosphoribosyltransferase (EC 2.4.2.14) — —
Enterobacter sp. TBS_079 0.93 MPMX20_03435 Pyridoxine 5'-phosphate synthase 0.96 MPMX20_03247 Amidophosphoribosyltransferase low > 85
Dickeya dianthicola ME23 0.81 DZA65_RS16885 pyridoxine 5'-phosphate synthase 0.88 DZA65_RS15335 amidophosphoribosyltransferase low > 75
Dickeya dianthicola 67-19 0.81 HGI48_RS15805 pyridoxine 5'-phosphate synthase 0.88 HGI48_RS14405 amidophosphoribosyltransferase low > 71
Dickeya dadantii 3937 0.81 DDA3937_RS15720 pyridoxine 5'-phosphate synthase 0.88 DDA3937_RS14435 amidophosphoribosyltransferase low > 74
Pectobacterium carotovorum WPP14 0.80 HER17_RS05830 pyridoxine 5'-phosphate synthase 0.90 HER17_RS07020 amidophosphoribosyltransferase 0.89 23
Pantoea sp. MT58 0.79 IAI47_04895 pyridoxine 5'-phosphate synthase 0.89 IAI47_06275 amidophosphoribosyltransferase 0.64 74
Rahnella sp. WP5 0.78 EX31_RS21850 pyridoxine 5'-phosphate synthase 0.88 EX31_RS19570 amidophosphoribosyltransferase 0.72 27
Serratia liquefaciens MT49 0.78 IAI46_19535 pyridoxine 5'-phosphate synthase 0.89 IAI46_17810 amidophosphoribosyltransferase — —
Erwinia tracheiphila SCR3 0.76 LU632_RS15370 pdxJ pyridoxine 5'-phosphate synthase 0.91 LU632_RS07865 purF amidophosphoribosyltransferase — —
Kangiella aquimarina DSM 16071 0.74 B158DRAFT_2190 pyridoxine 5'-phosphate synthase 0.64 B158DRAFT_1488 amidophosphoribosyltransferase (EC 2.4.2.14) — —
Alteromonas macleodii MIT1002 0.73 MIT1002_00791 Pyridoxine 5'-phosphate synthase 0.71 MIT1002_02524 Amidophosphoribosyltransferase — —
Vibrio cholerae E7946 ATCC 55056 0.71 CSW01_12440 pyridoxine 5'-phosphate synthase 0.76 CSW01_05115 amidophosphoribosyltransferase — —
Shewanella sp. ANA-3 0.67 Shewana3_3023 pyridoxine 5'-phosphate synthase (RefSeq) 0.73 Shewana3_1483 amidophosphoribosyltransferase (RefSeq) — —
Shewanella loihica PV-4 0.67 Shew_1057 pyridoxal phosphate biosynthetic protein PdxJ (RefSeq) 0.74 Shew_2302 amidophosphoribosyltransferase (RefSeq) — —
Shewanella oneidensis MR-1 0.67 SO1351 pdxJ pyridoxal phosphate biosynthetic protein PdxJ (NCBI ptt file) 0.73 SO3064 purF amidophosphoribosyltransferase (NCBI ptt file) — —
Shewanella amazonensis SB2B 0.66 Sama_0883 pyridoxine 5'-phosphate synthase (RefSeq) 0.74 Sama_2146 amidophosphoribosyltransferase (RefSeq) — —
Paraburkholderia sabiae LMG 24235 0.65 QEN71_RS04625 pyridoxine 5'-phosphate synthase 0.53 QEN71_RS17680 amidophosphoribosyltransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.64 H281DRAFT_04365 pyridoxine 5'-phosphate synthase 0.56 H281DRAFT_06060 amidophosphoribosyltransferase — —
Burkholderia phytofirmans PsJN 0.64 BPHYT_RS14355 pyridoxine 5'-phosphate synthase 0.56 BPHYT_RS33840 amidophosphoribosyltransferase — —
Paraburkholderia graminis OAS925 0.64 ABIE53_003033 pyridoxine 5-phosphate synthase 0.56 ABIE53_004816 amidophosphoribosyltransferase — —
Pseudomonas sp. RS175 0.63 PFR28_03520 'Pyridoxine 5'-phosphate synthase' transl_table=11 0.63 PFR28_02811 Amidophosphoribosyltransferase — —
Pseudomonas putida KT2440 0.63 PP_1436 Pyridoxine 5'-phosphate synthase 0.63 PP_2000 amidophosphoribosyl transferase — —
Pseudomonas fluorescens FW300-N2C3 0.62 AO356_17510 pyridoxine 5'-phosphate synthase 0.62 AO356_21465 amidophosphoribosyltransferase — —
Pseudomonas fluorescens GW456-L13 0.62 PfGW456L13_4837 Pyridoxine 5'-phosphate synthase (EC 2.6.99.2) 0.63 PfGW456L13_3935 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Pseudomonas syringae pv. syringae B728a 0.62 Psyr_3948 pyridoxine 5'-phosphate synthase 0.62 Psyr_1668 amidophosphoribosyltransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.62 Psyr_3948 pyridoxine 5'-phosphate synthase 0.62 Psyr_1668 amidophosphoribosyltransferase — —
Pseudomonas sp. S08-1 0.62 OH686_20095 pyridoxine 5'-phosphate synthase 0.63 OH686_04420 amidophosphoribosyltransferase — —
Pseudomonas fluorescens FW300-N2E2 0.62 Pf6N2E2_5429 Pyridoxine 5'-phosphate synthase (EC 2.6.99.2) 0.62 Pf6N2E2_76 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Cupriavidus basilensis FW507-4G11 0.61 RR42_RS14025 pyridoxine 5'-phosphate synthase 0.56 RR42_RS14325 amidophosphoribosyltransferase — —
Pseudomonas stutzeri RCH2 0.61 Psest_3089 pyridoxine 5'-phosphate synthase 0.62 Psest_2579 amidophosphoribosyltransferase — —
Pseudomonas fluorescens FW300-N2E3 0.61 AO353_04495 pyridoxine 5'-phosphate synthase 0.62 AO353_20690 amidophosphoribosyltransferase — —
Pseudomonas simiae WCS417 0.60 PS417_05205 pyridoxine 5'-phosphate synthase 0.62 PS417_18535 amidophosphoribosyltransferase — —
Marinobacter adhaerens HP15 0.60 HP15_787 pyridoxal phosphate biosynthetic protein PdxJ 0.63 HP15_1821 amidophosphoribosyltransferase — —
Pseudomonas fluorescens SBW25 0.60 PFLU_RS05275 pyridoxine 5'-phosphate synthase 0.62 PFLU_RS20515 amidophosphoribosyltransferase — —
Pseudomonas fluorescens SBW25-INTG 0.60 PFLU_RS05275 pyridoxine 5'-phosphate synthase 0.62 PFLU_RS20515 amidophosphoribosyltransferase — —
Acinetobacter radioresistens SK82 0.59 MPMX26_02152 Pyridoxine 5'-phosphate synthase 0.62 MPMX26_01122 Amidophosphoribosyltransferase — —
Ralstonia solanacearum UW163 0.58 UW163_RS11965 pyridoxine 5'-phosphate synthase 0.58 UW163_RS11175 amidophosphoribosyltransferase — —
Ralstonia solanacearum IBSBF1503 0.58 RALBFv3_RS14500 pyridoxine 5'-phosphate synthase 0.58 RALBFv3_RS02550 amidophosphoribosyltransferase — —
Ralstonia solanacearum GMI1000 0.57 RS_RS05280 pyridoxine 5'-phosphate synthase 0.58 RS_RS09930 amidophosphoribosyltransferase — —
Ralstonia solanacearum PSI07 0.57 RPSI07_RS18960 pyridoxine 5'-phosphate synthase 0.59 RPSI07_RS14765 amidophosphoribosyltransferase — —
Azospirillum sp. SherDot2 0.55 MPMX19_00840 Pyridoxine 5'-phosphate synthase 0.29 MPMX19_00906 Amidophosphoribosyltransferase low > 112
Phaeobacter inhibens DSM 17395 0.55 PGA1_c01030 pyridoxine 5'-phosphate synthase PdxJ 0.28 PGA1_c10810 amidophosphoribosyltransferase PurF — —
Herbaspirillum seropedicae SmR1 0.55 HSERO_RS09675 pyridoxine 5'-phosphate synthase 0.56 HSERO_RS16445 amidophosphoribosyltransferase — —
Ralstonia sp. UNC404CL21Col 0.55 ABZR87_RS10220 pyridoxine 5'-phosphate synthase 0.59 ABZR87_RS14465 amidophosphoribosyltransferase — —
Dinoroseobacter shibae DFL-12 0.54 Dshi_0196 pyridoxal phosphate biosynthetic protein PdxJ (RefSeq) 0.27 Dshi_2132 amidophosphoribosyltransferase (RefSeq) — —
Azospirillum brasilense Sp245 0.54 AZOBR_RS22055 pyridoxine 5'-phosphate synthase 0.30 AZOBR_RS08310 amidophosphoribosyltransferase low > 97
Dechlorosoma suillum PS 0.53 Dsui_2463 pyridoxine 5''-phosphate synthase 0.56 Dsui_3186 amidophosphoribosyltransferase — —
Synechococcus elongatus PCC 7942 0.52 Synpcc7942_1194 pdxJ pyridoxal phosphate biosynthetic protein PdxJ 0.30 Synpcc7942_0004 purF amidophosphoribosyltransferase — —
Magnetospirillum magneticum AMB-1 0.52 AMB_RS11405 pyridoxine 5'-phosphate synthase 0.28 AMB_RS10545 amidophosphoribosyltransferase — —
Bosea sp. OAE506 0.52 ABIE41_RS19905 pyridoxine 5'-phosphate synthase 0.29 ABIE41_RS17810 amidophosphoribosyltransferase low > 77
Caulobacter crescentus NA1000 0.52 CCNA_01626 pyridoxal phosphate biosynthetic protein pdxJ 0.32 CCNA_01730 amidophosphoribosyltransferase — —
Caulobacter crescentus NA1000 Δfur 0.52 CCNA_01626 pyridoxal phosphate biosynthetic protein pdxJ 0.32 CCNA_01730 amidophosphoribosyltransferase — —
Desulfovibrio vulgaris Hildenborough JW710 0.51 DVU1908 pdxJ pyridoxal phosphate biosynthetic protein PdxJ (TIGR) 0.28 DVU0161 purF amidophosphoribosyltransferase (TIGR) — —
Desulfovibrio vulgaris Miyazaki F 0.51 DvMF_0281 pyridoxine 5'-phosphate synthase (RefSeq) 0.28 DvMF_2307 amidophosphoribosyltransferase (RefSeq) low > 51
Sphingomonas koreensis DSMZ 15582 0.50 Ga0059261_2011 pyridoxine 5'-phosphate synthase 0.28 Ga0059261_3626 amidophosphoribosyltransferase (EC 2.4.2.14) — —
Castellaniella sp019104865 MT123 0.50 ABCV34_RS04215 pyridoxine 5'-phosphate synthase 0.55 ABCV34_RS04130 amidophosphoribosyltransferase — —
Rhodospirillum rubrum S1H 0.50 Rru_A1854 Pyridoxal phosphate biosynthetic protein PdxJ (NCBI) 0.30 Rru_A0404 Amidophosphoribosyl transferase (NCBI) low > 58
Rhodopseudomonas palustris CGA009 0.48 TX73_013960 pyridoxine 5'-phosphate synthase 0.28 TX73_015990 amidophosphoribosyltransferase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.42 A4249_RS05520 pyridoxine 5'-phosphate synthase 0.28 A4249_RS03735 amidophosphoribosyltransferase — —
Bacteroides thetaiotaomicron VPI-5482 0.32 BT3918 pyridoxal phosphate biosynthetic protein pdxJ (NCBI ptt file) 0.12 BT0555 amidophosphoribosyltransferase (NCBI ptt file) low > 81
Mucilaginibacter yixingensis YX-36 DSM 26809 0.31 ABZR88_RS01795 pyridoxine 5'-phosphate synthase 0.10 ABZR88_RS15630 class II glutamine amidotransferase — —
Parabacteroides merdae CL09T00C40 0.30 HMPREF1078_RS10265 pyridoxine 5'-phosphate synthase 0.12 HMPREF1078_RS10430 amidophosphoribosyltransferase low > 61
Pedobacter sp. GW460-11-11-14-LB5 0.30 CA265_RS25170 pyridoxine 5'-phosphate synthase 0.11 CA265_RS15055 amidophosphoribosyltransferase — —
Agrobacterium fabrum C58 0.30 Atu2024 pyridoxal phosphate biosynthesis protein 0.29 Atu1075 amidophosphoribosyltransferase — —
Dyella japonica UNC79MFTsu3.2 0.29 ABZR86_RS15180 pyridoxine 5'-phosphate synthase 0.59 ABZR86_RS06775 amidophosphoribosyltransferase — —
Rhodanobacter denitrificans MT42 0.29 LRK55_RS08205 pyridoxine 5'-phosphate synthase 0.58 LRK55_RS01105 amidophosphoribosyltransferase — —
Rhodanobacter denitrificans FW104-10B01 0.29 LRK54_RS08440 pyridoxine 5'-phosphate synthase 0.58 LRK54_RS01340 amidophosphoribosyltransferase — —
Sinorhizobium meliloti 1021 0.28 SMc01407 pyridoxine 5'-phosphate synthase 0.28 SMc00554 amidophosphoribosyltransferase — —
Xanthomonas campestris pv. campestris strain 8004 0.28 Xcc-8004.17.1 Pyridoxine 5'-phosphate synthase (EC 2.6.99.2) 0.58 Xcc-8004.4073.1 Amidophosphoribosyltransferase (EC 2.4.2.14) low > 74
Rhodanobacter sp. FW510-T8 0.27 OKGIIK_15220 pyridoxine 5'-phosphate synthase 0.59 OKGIIK_05570 purF amidophosphoribosyltransferase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.26 GFF3349 Pyridoxine 5'-phosphate synthase (EC 2.6.99.2) 0.54 GFF300 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Lysobacter sp. OAE881 0.26 ABIE51_RS00810 pyridoxine 5'-phosphate synthase 0.57 ABIE51_RS06180 amidophosphoribosyltransferase — —
Rhizobium sp. OAE497 0.25 ABIE40_RS11420 pyridoxine 5'-phosphate synthase 0.29 ABIE40_RS06270 amidophosphoribosyltransferase — —
Acidovorax sp. GW101-3H11 0.25 Ac3H11_1563 Pyridoxine 5'-phosphate synthase (EC 2.6.99.2) 0.55 Ac3H11_2608 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Variovorax sp. SCN45 0.22 GFF3873 Pyridoxine 5'-phosphate synthase (EC 2.6.99.2) 0.53 GFF3089 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Variovorax sp. OAS795 0.22 ABID97_RS08380 pyridoxine 5'-phosphate synthase 0.52 ABID97_RS21635 amidophosphoribosyltransferase — —

Not shown: 7 genomes with orthologs for BNILDI_11900 only; 5 genomes with orthologs for BNILDI_13255 only