Conservation of cofitness between Atu0486 and Atu3754 in Agrobacterium fabrum C58

96 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu0486 dihydroorotate dehydrogenase 1.0 Atu3754 phosphoribosylaminoimidazole carboxylase catalytic subunit 0.89 9
Sinorhizobium meliloti 1021 0.73 SMc02245 dihydroorotate dehydrogenase 2 0.75 SMc04001 phosphoribosylaminoimidazole carboxylase catalytic subunit protein 0.88 17
Rhizobium sp. OAE497 0.72 ABIE40_RS02420 quinone-dependent dihydroorotate dehydrogenase 0.77 ABIE40_RS16065 5-(carboxyamino)imidazole ribonucleotide mutase
Azospirillum sp. SherDot2 0.45 MPMX19_02083 Dihydroorotate dehydrogenase (quinone) 0.70 MPMX19_01417 N5-carboxyaminoimidazole ribonucleotide mutase
Azospirillum brasilense Sp245 0.45 AZOBR_RS13520 dihydroorotate dehydrogenase 0.70 AZOBR_RS06145 N5-carboxyaminoimidazole ribonucleotide mutase
Phaeobacter inhibens DSM 17395 0.45 PGA1_c12150 dihydroorotate dehydrogenase PyrD 0.54 PGA1_c24860 phosphoribosylaminoimidazole carboxylase catalytic subunit PurE 0.79 34
Rhodopseudomonas palustris CGA009 0.45 TX73_004110 quinone-dependent dihydroorotate dehydrogenase 0.64 TX73_021640 5-(carboxyamino)imidazole ribonucleotide mutase
Magnetospirillum magneticum AMB-1 0.42 AMB_RS19685 quinone-dependent dihydroorotate dehydrogenase 0.67 AMB_RS11145 5-(carboxyamino)imidazole ribonucleotide mutase
Dinoroseobacter shibae DFL-12 0.42 Dshi_0847 Dihydroorotate oxidase (RefSeq) 0.47 Dshi_0681 phosphoribosylaminoimidazole carboxylase, catalytic subunit (RefSeq)
Sphingomonas koreensis DSMZ 15582 0.42 Ga0059261_1468 dihydroorotate oxidase A (EC 1.3.3.1) 0.63 Ga0059261_1427 phosphoribosylaminoimidazole carboxylase, PurE protein
Rhodospirillum rubrum S1H 0.41 Rru_A0514 Dihydroorotate dehydrogenase 2 (NCBI) 0.60 Rru_A1050 Phosphoribosylaminoimidazole carboxylase (NCBI)
Castellaniella sp019104865 MT123 0.41 ABCV34_RS07790 quinone-dependent dihydroorotate dehydrogenase 0.41 ABCV34_RS00560 5-(carboxyamino)imidazole ribonucleotide mutase
Caulobacter crescentus NA1000 0.41 CCNA_00562 dihydroorotate dehydrogenase 0.67 CCNA_03393 phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit 0.90 10
Caulobacter crescentus NA1000 Δfur 0.41 CCNA_00562 dihydroorotate dehydrogenase 0.67 CCNA_03393 phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit low > 67
Bosea sp. OAE506 0.41 ABIE41_RS24065 quinone-dependent dihydroorotate dehydrogenase 0.68 ABIE41_RS09240 5-(carboxyamino)imidazole ribonucleotide mutase
Brevundimonas sp. GW460-12-10-14-LB2 0.41 A4249_RS00280 quinone-dependent dihydroorotate dehydrogenase 0.66 A4249_RS08940 5-(carboxyamino)imidazole ribonucleotide mutase
Variovorax sp. OAS795 0.40 ABID97_RS14065 quinone-dependent dihydroorotate dehydrogenase 0.42 ABID97_RS01705 5-(carboxyamino)imidazole ribonucleotide mutase
Dyella japonica UNC79MFTsu3.2 0.40 ABZR86_RS07450 quinone-dependent dihydroorotate dehydrogenase 0.53 ABZR86_RS09835 5-(carboxyamino)imidazole ribonucleotide mutase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.40 GFF4211 Dihydroorotate dehydrogenase (EC 1.3.3.1) 0.37 GFF2771 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
Acinetobacter radioresistens SK82 0.40 MPMX26_01120 Dihydroorotate dehydrogenase (quinone) 0.52 MPMX26_03051 N5-carboxyaminoimidazole ribonucleotide mutase 0.77 30
Pantoea sp. MT58 0.40 IAI47_12705 quinone-dependent dihydroorotate dehydrogenase 0.52 IAI47_14350 5-(carboxyamino)imidazole ribonucleotide mutase 0.96 10
Paraburkholderia sabiae LMG 24235 0.40 QEN71_RS22765 quinone-dependent dihydroorotate dehydrogenase 0.42 QEN71_RS02445 5-(carboxyamino)imidazole ribonucleotide mutase
Pontibacter actiniarum KMM 6156, DSM 19842 0.40 CA264_00865 dihydroorotate dehydrogenase (quinone) 0.47 CA264_12595 5-(carboxyamino)imidazole ribonucleotide mutase low > 74
Pectobacterium carotovorum WPP14 0.39 HER17_RS12005 quinone-dependent dihydroorotate dehydrogenase 0.51 HER17_RS06475 5-(carboxyamino)imidazole ribonucleotide mutase 0.92 51
Alteromonas macleodii MIT1002 0.39 MIT1002_02035 Dihydroorotate dehydrogenase (quinone) 0.46 MIT1002_00521 N5-carboxyaminoimidazole ribonucleotide mutase 0.81 12
Paraburkholderia graminis OAS925 0.39 ABIE53_001954 dihydroorotate dehydrogenase 0.42 ABIE53_003424 5-(carboxyamino)imidazole ribonucleotide mutase
Burkholderia phytofirmans PsJN 0.39 BPHYT_RS08565 dihydroorotate dehydrogenase 0.42 BPHYT_RS16250 N5-carboxyaminoimidazole ribonucleotide mutase low > 109
Rhodanobacter sp. FW510-T8 0.39 OKGIIK_09010 pyrD quinone-dependent dihydroorotate dehydrogenase 0.56 OKGIIK_03045 purE Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase
Dickeya dadantii 3937 0.39 DDA3937_RS12855 quinone-dependent dihydroorotate dehydrogenase 0.51 DDA3937_RS15105 5-(carboxyamino)imidazole ribonucleotide mutase
Pseudomonas stutzeri RCH2 0.39 Psest_1947 dihydroorotate dehydrogenase, subfamily 2 0.54 Psest_4069 phosphoribosylaminoimidazole carboxylase, PurE protein
Vibrio cholerae E7946 ATCC 55056 0.39 CSW01_07490 dihydroorotate dehydrogenase (quinone) 0.55 CSW01_00265 5-(carboxyamino)imidazole ribonucleotide mutase 0.47 31
Dickeya dianthicola ME23 0.39 DZA65_RS13390 quinone-dependent dihydroorotate dehydrogenase 0.50 DZA65_RS15990 5-(carboxyamino)imidazole ribonucleotide mutase low > 75
Pseudomonas fluorescens FW300-N2E3 0.39 AO353_00780 dihydroorotate dehydrogenase (quinone) 0.56 AO353_09940 N5-carboxyaminoimidazole ribonucleotide mutase
Shewanella sp. ANA-3 0.39 Shewana3_1786 dihydroorotate dehydrogenase 2 (RefSeq) 0.55 Shewana3_3155 phosphoribosylaminoimidazole carboxylase, catalytic subunit (RefSeq) 0.82 67
Pseudomonas simiae WCS417 0.39 PS417_20935 dihydroorotate dehydrogenase 0.56 PS417_28120 N5-carboxyaminoimidazole ribonucleotide mutase
Echinicola vietnamensis KMM 6221, DSM 17526 0.39 Echvi_1806 dihydroorotate dehydrogenase, subfamily 2 0.46 Echvi_0885 phosphoribosylaminoimidazole carboxylase, PurE protein
Pseudomonas putida KT2440 0.39 PP_2095 Dihydroorotate dehydrogenase (quinone) 0.54 PP_5336 N5-carboxyaminoimidazole ribonucleotide mutase
Dechlorosoma suillum PS 0.39 Dsui_2978 dihydroorotate dehydrogenase, subfamily 2 0.44 Dsui_0092 phosphoribosylaminoimidazole carboxylase, PurE protein
Pseudomonas fluorescens SBW25 0.39 PFLU_RS22550 quinone-dependent dihydroorotate dehydrogenase 0.56 PFLU_RS29805 5-(carboxyamino)imidazole ribonucleotide mutase
Pseudomonas fluorescens SBW25-INTG 0.39 PFLU_RS22550 quinone-dependent dihydroorotate dehydrogenase 0.56 PFLU_RS29805 5-(carboxyamino)imidazole ribonucleotide mutase
Shewanella loihica PV-4 0.39 Shew_1810 dihydroorotate dehydrogenase 2 (RefSeq) 0.60 Shew_1248 phosphoribosylaminoimidazole carboxylase, catalytic subunit (RefSeq)
Mucilaginibacter yixingensis YX-36 DSM 26809 0.39 ABZR88_RS12040 quinone-dependent dihydroorotate dehydrogenase 0.47 ABZR88_RS09285 5-(carboxyamino)imidazole ribonucleotide mutase
Variovorax sp. SCN45 0.39 GFF960 Dihydroorotate dehydrogenase (quinone) (EC 1.3.5.2) 0.43 GFF5512 N5-carboxyaminoimidazole ribonucleotide mutase (EC 5.4.99.18)
Pseudomonas fluorescens FW300-N1B4 0.38 Pf1N1B4_3842 Dihydroorotate dehydrogenase (EC 1.3.3.1) 0.56 Pf1N1B4_2027 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
Rahnella sp. WP5 0.38 EX31_RS18095 quinone-dependent dihydroorotate dehydrogenase 0.49 EX31_RS22625 5-(carboxyamino)imidazole ribonucleotide mutase 0.90 53
Herbaspirillum seropedicae SmR1 0.38 HSERO_RS16155 dihydroorotate dehydrogenase 0.42 HSERO_RS03365 N5-carboxyaminoimidazole ribonucleotide mutase
Klebsiella michiganensis M5al 0.38 BWI76_RS09910 dihydroorotate dehydrogenase (quinone) 0.52 BWI76_RS07070 5-(carboxyamino)imidazole ribonucleotide mutase 0.67 10
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_2106 dihydroorotate oxidase A 0.55 Psyr_5048 5-(carboxyamino)imidazole ribonucleotide mutase
Dickeya dianthicola 67-19 0.38 HGI48_RS12925 quinone-dependent dihydroorotate dehydrogenase 0.50 HGI48_RS15185 5-(carboxyamino)imidazole ribonucleotide mutase low > 71
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_2106 dihydroorotate oxidase A 0.55 Psyr_5048 5-(carboxyamino)imidazole ribonucleotide mutase
Rhodanobacter denitrificans MT42 0.38 LRK55_RS15740 quinone-dependent dihydroorotate dehydrogenase 0.58 LRK55_RS13525 5-(carboxyamino)imidazole ribonucleotide mutase
Pseudomonas fluorescens GW456-L13 0.38 PfGW456L13_4095 Dihydroorotate dehydrogenase (EC 1.3.3.1) 0.56 PfGW456L13_746 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
Paraburkholderia bryophila 376MFSha3.1 0.38 H281DRAFT_00743 dihydroorotate oxidase A 0.42 H281DRAFT_04186 5-(carboxyamino)imidazole ribonucleotide mutase
Pseudomonas fluorescens FW300-N2C3 0.38 AO356_02610 dihydroorotate dehydrogenase (quinone) 0.56 AO356_11080 N5-carboxyaminoimidazole ribonucleotide mutase
Shewanella amazonensis SB2B 0.38 Sama_1593 dihydroorotate dehydrogenase 2 (RefSeq) 0.60 Sama_1064 phosphoribosylaminoimidazole carboxylase (RefSeq) 0.63 33
Serratia liquefaciens MT49 0.38 IAI46_08805 quinone-dependent dihydroorotate dehydrogenase 0.49 IAI46_05375 5-(carboxyamino)imidazole ribonucleotide mutase low > 86
Pseudomonas sp. S08-1 0.38 OH686_03120 dihydroorotate dehydrogenase (fumarate) 0.58 OH686_13375 N5-carboxyaminoimidazole ribonucleotide mutase
Shewanella oneidensis MR-1 0.38 SO2592 pyrD dihydroorotate dehydrogenase (NCBI ptt file) 0.54 SO3554 purE phosphoribosylaminoimidazole carboxylase, catalytic subunit (NCBI ptt file) 0.87 24
Pseudomonas fluorescens FW300-N2E2 0.38 Pf6N2E2_2347 Dihydroorotate dehydrogenase (EC 1.3.3.1) 0.48 Pf6N2E2_4082 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
Marinobacter adhaerens HP15 0.38 HP15_1377 dihydroorotate dehydrogenase 0.58 HP15_2349 phosphoribosylaminoimidazole carboxylase catalytic subunit
Rhodanobacter denitrificans FW104-10B01 0.38 LRK54_RS15985 quinone-dependent dihydroorotate dehydrogenase 0.58 LRK54_RS13810 5-(carboxyamino)imidazole ribonucleotide mutase
Pedobacter sp. GW460-11-11-14-LB5 0.38 CA265_RS14005 dihydroorotate dehydrogenase (quinone) 0.47 CA265_RS07740 5-(carboxyamino)imidazole ribonucleotide mutase
Pseudomonas sp. RS175 0.38 PFR28_01054 Dihydroorotate dehydrogenase (quinone) 0.56 PFR28_04496 N5-carboxyaminoimidazole ribonucleotide mutase
Escherichia fergusonii Becca 0.38 EFB2_03126 Dihydroorotate dehydrogenase (quinone) 0.51 EFB2_03539 N5-carboxyaminoimidazole ribonucleotide mutase low > 86
Ralstonia solanacearum IBSBF1503 0.38 RALBFv3_RS01570 quinone-dependent dihydroorotate dehydrogenase 0.44 RALBFv3_RS12195 5-(carboxyamino)imidazole ribonucleotide mutase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.38 GFF3236 Dihydroorotate dehydrogenase (EC 1.3.3.1) 0.50 GFF4439 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) low > 78
Escherichia coli ECOR38 0.38 HEPCGN_23225 pyrD quinone-dependent dihydroorotate dehydrogenase 0.51 HEPCGN_06475 purE N5-carboxyaminoimidazole ribonucleotide mutase low > 85
Escherichia coli Nissle 1917 0.38 ECOLIN_RS04965 quinone-dependent dihydroorotate dehydrogenase 0.51 ECOLIN_RS03030 5-(carboxyamino)imidazole ribonucleotide mutase
Ralstonia solanacearum UW163 0.38 UW163_RS14880 quinone-dependent dihydroorotate dehydrogenase 0.44 UW163_RS01415 5-(carboxyamino)imidazole ribonucleotide mutase
Escherichia coli ECRC102 0.37 NIAGMN_03015 pyrD quinone-dependent dihydroorotate dehydrogenase 0.51 NIAGMN_05890 purE N5-carboxyaminoimidazole ribonucleotide mutase
Escherichia coli ECOR27 0.37 NOLOHH_21850 pyrD quinone-dependent dihydroorotate dehydrogenase 0.51 NOLOHH_00825 purE N5-carboxyaminoimidazole ribonucleotide mutase low > 57
Ralstonia solanacearum PSI07 0.37 RPSI07_RS15920 quinone-dependent dihydroorotate dehydrogenase 0.43 RPSI07_RS21135 5-(carboxyamino)imidazole ribonucleotide mutase
Escherichia coli ECRC101 0.37 OKFHMN_05295 pyrD quinone-dependent dihydroorotate dehydrogenase 0.51 OKFHMN_07835 purE N5-carboxyaminoimidazole ribonucleotide mutase
Escherichia coli ECRC99 0.37 KEDOAH_22440 pyrD quinone-dependent dihydroorotate dehydrogenase 0.51 KEDOAH_20135 purE N5-carboxyaminoimidazole ribonucleotide mutase
Escherichia coli ECRC98 0.37 JDDGAC_08905 pyrD quinone-dependent dihydroorotate dehydrogenase 0.51 JDDGAC_11485 purE N5-carboxyaminoimidazole ribonucleotide mutase
Escherichia coli ECRC62 0.37 BNILDI_20015 pyrD quinone-dependent dihydroorotate dehydrogenase 0.51 BNILDI_22255 purE N5-carboxyaminoimidazole ribonucleotide mutase
Escherichia coli BL21 0.37 ECD_00949 dihydro-orotate oxidase, FMN-linked 0.51 ECD_00473 N5-carboxyaminoimidazole ribonucleotide mutase 0.74 21
Escherichia coli BW25113 0.37 b0945 pyrD dihydroorotate dehydrogenase (NCBI) 0.51 b0523 purE phosphoribosylaminoimidazole carboxylase catalytic subunit (NCBI) 0.90 10
Escherichia coli HS(pFamp)R (ATCC 700891) 0.37 OHPLBJKB_02721 Dihydroorotate dehydrogenase (quinone) 0.51 OHPLBJKB_03158 N5-carboxyaminoimidazole ribonucleotide mutase low > 73
Escherichia coli ECRC101 0.37 MCAODC_24685 pyrD quinone-dependent dihydroorotate dehydrogenase 0.51 MCAODC_27055 purE N5-carboxyaminoimidazole ribonucleotide mutase
Enterobacter asburiae PDN3 0.37 EX28DRAFT_1998 dihydroorotate oxidase A (EC 1.3.3.1) 0.49 EX28DRAFT_2459 phosphoribosylaminoimidazole carboxylase, PurE protein
Enterobacter sp. TBS_079 0.37 MPMX20_01596 Dihydroorotate dehydrogenase (quinone) 0.49 MPMX20_01098 N5-carboxyaminoimidazole ribonucleotide mutase 0.83 23
Ralstonia sp. UNC404CL21Col 0.37 ABZR87_RS13360 quinone-dependent dihydroorotate dehydrogenase 0.41 ABZR87_RS08085 5-(carboxyamino)imidazole ribonucleotide mutase
Ralstonia solanacearum GMI1000 0.37 RS_RS08160 dihydroorotate dehydrogenase (quinone) 0.44 RS_RS02880 5-(carboxyamino)imidazole ribonucleotide mutase
Cupriavidus basilensis FW507-4G11 0.37 RR42_RS07465 dihydroorotate dehydrogenase 0.38 RR42_RS03225 N5-carboxyaminoimidazole ribonucleotide mutase
Kangiella aquimarina DSM 16071 0.36 B158DRAFT_2228 dihydroorotate oxidase A (EC 1.3.3.1) 0.57 B158DRAFT_0611 5-(carboxyamino)imidazole ribonucleotide mutase
Xanthomonas campestris pv. campestris strain 8004 0.36 Xcc-8004.3032.1 Dihydroorotate dehydrogenase (EC 1.3.3.1) 0.42 Xcc-8004.2011.1 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
Erwinia tracheiphila SCR3 0.36 LU632_RS09955 pyrD quinone-dependent dihydroorotate dehydrogenase 0.52 LU632_RS15245 purE 5-(carboxyamino)imidazole ribonucleotide mutase 0.83 18
Lysobacter sp. OAE881 0.36 ABIE51_RS13725 quinone-dependent dihydroorotate dehydrogenase 0.43 ABIE51_RS15395 5-(carboxyamino)imidazole ribonucleotide mutase
Mycobacterium tuberculosis H37Rv 0.33 Rv2139 Probable dihydroorotate dehydrogenase PyrD 0.46 Rv3275c Probable phosphoribosylaminoimidazole carboxylase catalytic subunit PurE (air carboxylase) (AIRC)
Fusobacterium nucleatum SB010 0.08 HUW76_08740 dihydroorotate dehydrogenase 0.39 HUW76_05160 5-(carboxyamino)imidazole ribonucleotide mutase low > 35
Phocaeicola dorei CL03T12C01 0.08 ABI39_RS17250 dihydroorotate dehydrogenase 0.41 ABI39_RS04245 5-(carboxyamino)imidazole ribonucleotide mutase
Phocaeicola vulgatus CL09T03C04 0.08 HMPREF1058_RS03975 dihydroorotate dehydrogenase 0.42 HMPREF1058_RS12490 5-(carboxyamino)imidazole ribonucleotide mutase
Parabacteroides merdae CL09T00C40 0.08 HMPREF1078_RS02295 dihydroorotate dehydrogenase 0.45 HMPREF1078_RS05935 5-(carboxyamino)imidazole ribonucleotide mutase
Desulfovibrio vulgaris Hildenborough JW710 0.08 DVU3316 pyrD dihydroorotate dehydrogenase (TIGR) 0.34 DVU0487 purE phosphoribosylaminoimidazole carboxylase, catalytic subunit (TIGR)
Bacteroides ovatus ATCC 8483 0.08 BACOVA_02614 dihydroorotate dehydrogenase 1B 0.43 BACOVA_01613 phosphoribosylaminoimidazole carboxylase, catalytic subunit
Desulfovibrio vulgaris Miyazaki F 0.07 DvMF_2143 dihydroorotate dehydrogenase family protein (RefSeq) 0.35 DvMF_1723 phosphoribosylaminoimidazole carboxylase, catalytic subunit (RefSeq) low > 51

Not shown: 1 genomes with orthologs for Atu0486 only; 4 genomes with orthologs for Atu3754 only