Conservation of cofitness between Atu2650 and Atu1075 in Agrobacterium fabrum C58

91 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu2650 glycerol-3-phosphate dehydrogenase 1.0 Atu1075 amidophosphoribosyltransferase 0.88 10
Rhizobium sp. OAE497 0.72 ABIE40_RS18055 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.87 ABIE40_RS06270 amidophosphoribosyltransferase 0.76 5
Sinorhizobium meliloti 1021 0.64 SMc03229 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.84 SMc00554 amidophosphoribosyltransferase 0.79 9
Brevundimonas sp. GW460-12-10-14-LB2 0.40 A4249_RS15450 NAD(P)-dependent glycerol-3-phosphate dehydrogenase 0.56 A4249_RS03735 amidophosphoribosyltransferase — —
Kangiella aquimarina DSM 16071 0.39 B158DRAFT_0712 Glycerol-3-phosphate dehydrogenase 0.27 B158DRAFT_1488 amidophosphoribosyltransferase (EC 2.4.2.14) — —
Pantoea sp. MT58 0.38 IAI47_00740 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.29 IAI47_06275 amidophosphoribosyltransferase — —
Serratia liquefaciens MT49 0.38 IAI46_24690 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.29 IAI46_17810 amidophosphoribosyltransferase low > 86
Rhodospirillum rubrum S1H 0.38 Rru_A3571 Glycerol-3-phosphate dehydrogenase (NAD(P)+) (NCBI) 0.56 Rru_A0404 Amidophosphoribosyl transferase (NCBI) low > 58
Dinoroseobacter shibae DFL-12 0.38 Dshi_3414 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein (RefSeq) 0.50 Dshi_2132 amidophosphoribosyltransferase (RefSeq) 0.77 8
Phaeobacter inhibens DSM 17395 0.38 PGA1_c35480 glycerol-3-phosphate dehydrogenase GpsA 0.51 PGA1_c10810 amidophosphoribosyltransferase PurF 0.90 8
Rahnella sp. WP5 0.38 EX31_RS14340 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.28 EX31_RS19570 amidophosphoribosyltransferase 0.69 71
Erwinia tracheiphila SCR3 0.38 LU632_RS21875 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.29 LU632_RS07865 purF amidophosphoribosyltransferase 0.83 1
Dickeya dadantii 3937 0.37 DDA3937_RS20405 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.30 DDA3937_RS14435 amidophosphoribosyltransferase — —
Azospirillum sp. SherDot2 0.37 MPMX19_02123 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.57 MPMX19_00906 Amidophosphoribosyltransferase 0.76 3
Dickeya dianthicola 67-19 0.37 HGI48_RS00795 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.29 HGI48_RS14405 amidophosphoribosyltransferase low > 71
Dickeya dianthicola ME23 0.37 DZA65_RS00850 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.29 DZA65_RS15335 amidophosphoribosyltransferase — —
Pectobacterium carotovorum WPP14 0.37 HER17_RS20735 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.29 HER17_RS07020 amidophosphoribosyltransferase low > 75
Caulobacter crescentus NA1000 Δfur 0.37 CCNA_00068 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.62 CCNA_01730 amidophosphoribosyltransferase — —
Caulobacter crescentus NA1000 0.37 CCNA_00068 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.62 CCNA_01730 amidophosphoribosyltransferase — —
Escherichia coli ECOR27 0.36 NOLOHH_07635 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.29 NOLOHH_14335 purF amidophosphoribosyltransferase — —
Escherichia coli ECRC101 0.36 MCAODC_06265 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.30 MCAODC_13755 purF amidophosphoribosyltransferase — —
Escherichia coli BL21 0.36 ECD_03466 glycerol-3-phosphate dehydrogenase (NAD+) 0.29 ECD_02237 amidophosphoribosyltransferase — —
Escherichia coli BW25113 0.36 b3608 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (NCBI) 0.29 b2312 purF amidophosphoribosyltransferase (NCBI) — —
Escherichia coli ECRC101 0.36 OKFHMN_15755 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.30 OKFHMN_22715 purF amidophosphoribosyltransferase — —
Escherichia coli ECOR38 0.36 HEPCGN_14595 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.30 HEPCGN_21910 purF amidophosphoribosyltransferase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.36 OHPLBJKB_00091 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.30 OHPLBJKB_01393 Amidophosphoribosyltransferase — —
Escherichia coli ECRC99 0.36 KEDOAH_12395 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.30 KEDOAH_05480 purF amidophosphoribosyltransferase — —
Escherichia coli ECRC62 0.36 BNILDI_03880 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.29 BNILDI_13255 purF amidophosphoribosyltransferase — —
Escherichia coli Nissle 1917 0.36 ECOLIN_RS20595 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.30 ECOLIN_RS13405 amidophosphoribosyltransferase — —
Escherichia fergusonii Becca 0.36 EFB2_00202 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.30 EFB2_01546 Amidophosphoribosyltransferase — —
Escherichia coli ECRC98 0.36 JDDGAC_19380 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.30 JDDGAC_26675 purF amidophosphoribosyltransferase — —
Escherichia coli ECRC102 0.36 NIAGMN_13515 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.30 NIAGMN_20485 purF amidophosphoribosyltransferase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.36 GFF402 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.30 GFF1927 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Klebsiella michiganensis M5al 0.36 BWI76_RS27210 glycerol-3-phosphate dehydrogenase 0.30 BWI76_RS20350 amidophosphoribosyltransferase — —
Enterobacter asburiae PDN3 0.36 EX28DRAFT_3859 Glycerol-3-phosphate dehydrogenase 0.29 EX28DRAFT_0292 amidophosphoribosyltransferase (EC 2.4.2.14) — —
Vibrio cholerae E7946 ATCC 55056 0.36 CSW01_13405 glycerol-3-phosphate dehydrogenase (NAD(P)(+)) 0.29 CSW01_05115 amidophosphoribosyltransferase — —
Enterobacter sp. TBS_079 0.36 MPMX20_00125 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.30 MPMX20_03247 Amidophosphoribosyltransferase — —
Azospirillum brasilense Sp245 0.36 AZOBR_RS00325 glycerol-3-phosphate dehydrogenase 0.57 AZOBR_RS08310 amidophosphoribosyltransferase 0.59 34
Shewanella loihica PV-4 0.36 Shew_3803 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (RefSeq) 0.31 Shew_2302 amidophosphoribosyltransferase (RefSeq) — —
Shewanella amazonensis SB2B 0.36 Sama_0063 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (RefSeq) 0.30 Sama_2146 amidophosphoribosyltransferase (RefSeq) — —
Lysobacter sp. OAE881 0.35 ABIE51_RS00495 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.28 ABIE51_RS06180 amidophosphoribosyltransferase — —
Rhodanobacter sp. FW510-T8 0.35 OKGIIK_13015 gpsA glycerol-3-phosphate dehydrogenase 0.27 OKGIIK_05570 purF amidophosphoribosyltransferase — —
Alteromonas macleodii MIT1002 0.35 MIT1002_00485 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.29 MIT1002_02524 Amidophosphoribosyltransferase low > 70
Shewanella sp. ANA-3 0.35 Shewana3_0054 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (RefSeq) 0.30 Shewana3_1483 amidophosphoribosyltransferase (RefSeq) — —
Xanthomonas campestris pv. campestris strain 8004 0.35 Xcc-8004.271.1 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.27 Xcc-8004.4073.1 Amidophosphoribosyltransferase (EC 2.4.2.14) 0.64 26
Shewanella oneidensis MR-1 0.35 SO0053 gpsA glycerol-3-phosphate dehydrogenase (NAD(P)+) (NCBI ptt file) 0.30 SO3064 purF amidophosphoribosyltransferase (NCBI ptt file) — —
Sphingomonas koreensis DSMZ 15582 0.35 Ga0059261_2234 Glycerol-3-phosphate dehydrogenase 0.55 Ga0059261_3626 amidophosphoribosyltransferase (EC 2.4.2.14) — —
Bosea sp. OAE506 0.35 ABIE41_RS05655 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.65 ABIE41_RS17810 amidophosphoribosyltransferase 0.54 32
Fusobacterium nucleatum SB010 0.34 HUW76_05650 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.32 HUW76_05170 amidophosphoribosyltransferase — —
Dyella japonica UNC79MFTsu3.2 0.34 ABZR86_RS13250 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.28 ABZR86_RS06775 amidophosphoribosyltransferase — —
Rhodopseudomonas palustris CGA009 0.34 TX73_001320 NAD(P)-dependent glycerol-3-phosphate dehydrogenase 0.61 TX73_015990 amidophosphoribosyltransferase — —
Desulfovibrio vulgaris Hildenborough JW710 0.33 DVU3159 gpsA glycerol-3-phosphate dehydrogenase (NAD(P)+) (TIGR) 0.41 DVU0161 purF amidophosphoribosyltransferase (TIGR) — —
Rhodanobacter denitrificans MT42 0.33 LRK55_RS10550 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.27 LRK55_RS01105 amidophosphoribosyltransferase — —
Rhodanobacter denitrificans FW104-10B01 0.33 LRK54_RS10860 NAD(P)-dependent glycerol-3-phosphate dehydrogenase 0.27 LRK54_RS01340 amidophosphoribosyltransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.32 H281DRAFT_02000 glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.27 H281DRAFT_06060 amidophosphoribosyltransferase low > 103
Herbaspirillum seropedicae SmR1 0.32 HSERO_RS00795 glycerol-3-phosphate dehydrogenase 0.26 HSERO_RS16445 amidophosphoribosyltransferase — —
Castellaniella sp019104865 MT123 0.31 ABCV34_RS14250 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.25 ABCV34_RS04130 amidophosphoribosyltransferase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.31 GFF1222 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.27 GFF300 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Marinobacter adhaerens HP15 0.31 HP15_1762 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.27 HP15_1821 amidophosphoribosyltransferase — —
Pseudomonas stutzeri RCH2 0.30 Psest_2471 Glycerol-3-phosphate dehydrogenase 0.27 Psest_2579 amidophosphoribosyltransferase — —
Acidovorax sp. GW101-3H11 0.30 Ac3H11_3860 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.27 Ac3H11_2608 Amidophosphoribosyltransferase (EC 2.4.2.14) 0.68 32
Ralstonia solanacearum GMI1000 0.30 RS_RS01760 glycerol-3-phosphate dehydrogenase (NAD(P)(+)) 0.28 RS_RS09930 amidophosphoribosyltransferase — —
Paraburkholderia graminis OAS925 0.29 ABIE53_000667 glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.27 ABIE53_004816 amidophosphoribosyltransferase — —
Pseudomonas fluorescens FW300-N2E2 0.29 Pf6N2E2_5875 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.26 Pf6N2E2_76 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Pseudomonas fluorescens FW300-N2C3 0.29 AO356_19795 glycerol-3-phosphate dehydrogenase 0.26 AO356_21465 amidophosphoribosyltransferase 0.77 40
Ralstonia solanacearum IBSBF1503 0.29 RALBFv3_RS10920 glycerol-3-phosphate dehydrogenase 0.27 RALBFv3_RS02550 amidophosphoribosyltransferase — —
Variovorax sp. OAS795 0.29 ABID97_RS07405 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.26 ABID97_RS21635 amidophosphoribosyltransferase — —
Ralstonia solanacearum UW163 0.29 UW163_RS02660 glycerol-3-phosphate dehydrogenase 0.27 UW163_RS11175 amidophosphoribosyltransferase — —
Pseudomonas sp. RS175 0.29 PFR28_03076 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.26 PFR28_02811 Amidophosphoribosyltransferase — —
Variovorax sp. SCN45 0.29 GFF2573 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.26 GFF3089 Amidophosphoribosyltransferase (EC 2.4.2.14) low > 127
Pseudomonas fluorescens FW300-N2E3 0.29 AO353_01735 glycerol-3-phosphate dehydrogenase 0.27 AO353_20690 amidophosphoribosyltransferase — —
Pseudomonas fluorescens SBW25 0.28 PFLU_RS09055 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.27 PFLU_RS20515 amidophosphoribosyltransferase 0.50 15
Mycobacterium tuberculosis H37Rv 0.28 Rv2982c Probable glycerol-3-phosphate dehydrogenase [NAD(P)+] GpdA2 (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) 0.36 Rv0808 Amidophosphoribosyltransferase PurF (glutamine phosphoribosylpyrophosphate amidotransferase) (ATASE) (gpatase) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.28 Psyr_2022 Glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.27 Psyr_1668 amidophosphoribosyltransferase 0.65 27
Pseudomonas syringae pv. syringae B728a 0.28 Psyr_2022 Glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.27 Psyr_1668 amidophosphoribosyltransferase — —
Pseudomonas fluorescens SBW25-INTG 0.28 PFLU_RS09055 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.27 PFLU_RS20515 amidophosphoribosyltransferase 0.48 5
Ralstonia sp. UNC404CL21Col 0.28 ABZR87_RS06770 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.26 ABZR87_RS14465 amidophosphoribosyltransferase — —
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_2046 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.26 PfGW456L13_3935 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Pseudomonas simiae WCS417 0.28 PS417_09000 glycerol-3-phosphate dehydrogenase 0.27 PS417_18535 amidophosphoribosyltransferase — —
Burkholderia phytofirmans PsJN 0.28 BPHYT_RS02610 glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.27 BPHYT_RS33840 amidophosphoribosyltransferase 0.72 40
Pseudomonas putida KT2440 0.28 PP_4169 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.27 PP_2000 amidophosphoribosyl transferase — —
Ralstonia solanacearum PSI07 0.28 RPSI07_RS22390 glycerol-3-phosphate dehydrogenase 0.28 RPSI07_RS14765 amidophosphoribosyltransferase — —
Paraburkholderia sabiae LMG 24235 0.28 QEN71_RS01465 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.26 QEN71_RS17680 amidophosphoribosyltransferase 0.76 39
Dechlorosoma suillum PS 0.27 Dsui_1277 glycerol-3-phosphate dehydrogenase 0.29 Dsui_3186 amidophosphoribosyltransferase — —
Pseudomonas sp. S08-1 0.26 OH686_00475 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.27 OH686_04420 amidophosphoribosyltransferase — —
Acinetobacter radioresistens SK82 0.26 MPMX26_01116 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.26 MPMX26_01122 Amidophosphoribosyltransferase — —
Cupriavidus basilensis FW507-4G11 0.26 RR42_RS01845 glycerol-3-phosphate dehydrogenase 0.26 RR42_RS14325 amidophosphoribosyltransferase — —
Bifidobacterium breve UCC2003 0.25 BBR_RS12080 NAD(P)-dependent glycerol-3-phosphate dehydrogenase 0.42 BBR_RS13380 amidophosphoribosyltransferase — —
Synechococcus elongatus PCC 7942 0.25 Synpcc7942_2522 Glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.36 Synpcc7942_0004 purF amidophosphoribosyltransferase — —
Phocaeicola vulgatus CL09T03C04 0.17 HMPREF1058_RS07270 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.15 HMPREF1058_RS04675 amidophosphoribosyltransferase — —
Phocaeicola dorei CL03T12C01 0.17 ABI39_RS21145 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.15 ABI39_RS18960 amidophosphoribosyltransferase — —
Parabacteroides merdae CL09T00C40 0.17 HMPREF1078_RS10070 glycerol-3-phosphate dehydrogenase 0.15 HMPREF1078_RS10430 amidophosphoribosyltransferase — —

Not shown: 8 genomes with orthologs for Atu2650 only; 4 genomes with orthologs for Atu1075 only