| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Bacteroides thetaiotaomicron VPI-5482 | 1.0 | BT1336 | | putative translation initiation inhibitor (NCBI ptt file) | 1.0 | BT0202 | | histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) | 0.69 | 19 |
| Bacteroides ovatus ATCC 8483 | 0.96 | BACOVA_00589 | | putative endoribonuclease L-PSP | 0.92 | BACOVA_01233 | | histidinol-phosphate transaminase | low | > 94 |
| Bacteroides stercoris CC31F | 0.88 | HMPREF1181_RS10885 | | RidA family protein | 0.84 | HMPREF1181_RS04855 | | histidinol-phosphate transaminase | low | > 56 |
| Phocaeicola vulgatus CL09T03C04 | 0.71 | HMPREF1058_RS18400 | | RidA family protein | 0.78 | HMPREF1058_RS15880 | | histidinol-phosphate transaminase | 0.59 | 17 |
| Phocaeicola dorei CL03T12C01 | 0.70 | ABI39_RS14715 | | RidA family protein | 0.78 | ABI39_RS11840 | | histidinol-phosphate transaminase | low | > 72 |
| Parabacteroides merdae CL09T00C40 | 0.63 | HMPREF1078_RS02020 | | RidA family protein | 0.60 | HMPREF1078_RS02445 | | histidinol-phosphate transaminase | low | > 61 |
| Pantoea sp. MT58 | 0.55 | IAI47_16870 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.31 | IAI47_07085 | | histidinol-phosphate transaminase | 0.85 | 27 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.55 | GFF928 | | Endoribonuclease L-PSP | 0.28 | GFF3911 | | Histidinol-phosphate aminotransferase (EC 2.6.1.9) | low | > 78 |
| Klebsiella michiganensis M5al | 0.54 | BWI76_RS02985 | | reactive intermediate/imine deaminase | 0.28 | BWI76_RS18930 | | histidinol-phosphate transaminase | 0.40 | 32 |
| Enterobacter sp. TBS_079 | 0.54 | MPMX20_00542 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.29 | MPMX20_03003 | | Histidinol-phosphate aminotransferase | 0.39 | 29 |
| Dickeya dianthicola ME23 | 0.54 | DZA65_RS01960 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.28 | DZA65_RS10050 | | histidinol-phosphate transaminase | low | > 75 |
| Dickeya dianthicola 67-19 | 0.54 | HGI48_RS01890 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.28 | HGI48_RS09740 | | histidinol-phosphate transaminase | — | — |
| Dickeya dadantii 3937 | 0.53 | DDA3937_RS01915 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.28 | DDA3937_RS09730 | | histidinol-phosphate transaminase | 0.35 | 72 |
| Enterobacter asburiae PDN3 | 0.53 | EX28DRAFT_3444 | | reactive intermediate/imine deaminase | 0.29 | EX28DRAFT_0538 | | histidinol-phosphate aminotransferase | low | > 76 |
| Rahnella sp. WP5 | 0.53 | EX31_RS12775 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.27 | EX31_RS11445 | | histidinol-phosphate transaminase | low | > 89 |
| Escherichia coli ECOR38 | 0.52 | HEPCGN_10070 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.27 | HEPCGN_03215 | hisC | histidinol-phosphate transaminase | low | > 85 |
| Escherichia coli BL21 | 0.52 | ECD_04111 | | enamine/imine deaminase, reaction intermediate detoxification | 0.27 | ECD_01923 | | histidinol-phosphate aminotransferase | low | > 60 |
| Escherichia coli Nissle 1917 | 0.52 | ECOLIN_RS24615 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.27 | ECOLIN_RS11950 | | histidinol-phosphate transaminase | — | — |
| Escherichia fergusonii Becca | 0.52 | EFB2_04290 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.27 | EFB2_01835 | | Histidinol-phosphate aminotransferase | low | > 86 |
| Escherichia coli ECOR27 | 0.52 | NOLOHH_04135 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.28 | NOLOHH_15825 | hisC | histidinol-phosphate transaminase | low | > 57 |
| Escherichia coli ECRC102 | 0.52 | NIAGMN_09725 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.28 | NIAGMN_22455 | hisC | histidinol-phosphate transaminase | — | — |
| Escherichia coli BW25113 | 0.52 | b4243 | yjgF | orf, hypothetical protein (VIMSS) | 0.27 | b2021 | hisC | histidinol-phosphate aminotransferase (NCBI) | low | > 76 |
| Escherichia coli ECRC101 | 0.52 | OKFHMN_11875 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.28 | OKFHMN_24510 | hisC | histidinol-phosphate transaminase | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.52 | OHPLBJKB_03791 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.28 | OHPLBJKB_01679 | | Histidinol-phosphate aminotransferase | low | > 73 |
| Escherichia coli ECRC62 | 0.52 | BNILDI_07375 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.27 | BNILDI_14735 | hisC | histidinol-phosphate transaminase | — | — |
| Escherichia coli ECRC101 | 0.52 | MCAODC_02380 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.28 | MCAODC_20430 | hisC | histidinol-phosphate transaminase | — | — |
| Escherichia coli ECRC99 | 0.52 | KEDOAH_16280 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.28 | KEDOAH_03640 | hisC | histidinol-phosphate transaminase | — | — |
| Escherichia coli ECRC98 | 0.52 | JDDGAC_15515 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.28 | JDDGAC_28620 | hisC | histidinol-phosphate transaminase | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.52 | CSW01_12735 | | RidA family protein | 0.27 | CSW01_05755 | | histidinol-phosphate transaminase | low | > 62 |
| Erwinia tracheiphila SCR3 | 0.51 | LU632_RS20960 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.28 | LU632_RS08940 | hisC | histidinol-phosphate transaminase | 0.63 | 15 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.51 | DVU2647 | | endoribonuclease, L-PSP family (TIGR) | 0.25 | DVU1029 | hisC | histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) | low | > 55 |
| Pectobacterium carotovorum WPP14 | 0.50 | HER17_RS19520 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.30 | HER17_RS12235 | | histidinol-phosphate transaminase | low | > 75 |
| Fusobacterium nucleatum SB010 | 0.49 | HUW76_10065 | | RidA family protein | 0.12 | HUW76_05250 | | threonine-phosphate decarboxylase | low | > 35 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.49 | CA265_RS22825 | | reactive intermediate/imine deaminase | 0.55 | CA265_RS03630 | | histidinol-phosphate transaminase | 0.86 | 27 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.49 | Psyr_0208 | | endoribonuclease L-PSP | 0.18 | Psyr_4132 | | histidinol phosphate aminotransferase apoenzyme | 0.45 | 25 |
| Pseudomonas syringae pv. syringae B728a | 0.49 | Psyr_0208 | | endoribonuclease L-PSP | 0.18 | Psyr_4132 | | histidinol phosphate aminotransferase apoenzyme | 0.68 | 18 |
| Synechococcus elongatus PCC 7942 | 0.49 | Synpcc7942_0972 | | YjgF-like protein | 0.19 | Synpcc7942_1030 | hisC | histidinol-phosphate aminotransferase | — | — |
| Serratia liquefaciens MT49 | 0.48 | IAI46_02265 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.27 | IAI46_08205 | | histidinol-phosphate transaminase | low | > 86 |
| Pseudomonas fluorescens FW300-N2E2 | 0.48 | Pf6N2E2_4360 | | Bona fide RidA/YjgF/TdcF/RutC subgroup | 0.20 | Pf6N2E2_2519 | | Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.48 | AO356_12475 | | reactive intermediate/imine deaminase | 0.20 | AO356_03460 | | aspartate aminotransferase | low | > 104 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.48 | ABZR88_RS17245 | | RidA family protein | 0.52 | ABZR88_RS06875 | | histidinol-phosphate transaminase | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.47 | AO353_09285 | | reactive intermediate/imine deaminase | 0.21 | AO353_02065 | | aspartate aminotransferase | 0.46 | 80 |
| Pseudomonas fluorescens GW456-L13 | 0.47 | PfGW456L13_779 | | Bona fide RidA/YjgF/TdcF/RutC subgroup | 0.20 | PfGW456L13_2177 | | Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) | low | > 87 |
| Pseudomonas fluorescens SBW25 | 0.47 | PFLU_RS29515 | | RidA family protein | 0.20 | PFLU_RS08100 | | histidinol-phosphate transaminase | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.47 | PFLU_RS29515 | | RidA family protein | 0.20 | PFLU_RS08100 | | histidinol-phosphate transaminase | low | > 109 |
| Pseudomonas simiae WCS417 | 0.47 | PS417_27835 | | endoribonuclease | 0.20 | PS417_08130 | | aspartate aminotransferase | low | > 88 |
| Pseudomonas sp. RS175 | 0.47 | PFR28_04425 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.21 | PFR28_00908 | | Histidinol-phosphate aminotransferase | low | > 88 |
| Pseudomonas putida KT2440 | 0.47 | PP_5303 | | aminoacrylate/iminopropionate hydrolase/deaminase | 0.17 | PP_0967 | | histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) | 0.63 | 17 |
| Pseudomonas fluorescens FW300-N1B4 | 0.47 | Pf1N1B4_2112 | | Bona fide RidA/YjgF/TdcF/RutC subgroup | 0.21 | Pf1N1B4_349 | | Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) | 0.50 | 71 |
| Lysobacter sp. OAE881 | 0.46 | ABIE51_RS17260 | | RidA family protein | 0.27 | ABIE51_RS13320 | | histidinol-phosphate transaminase | 0.87 | 43 |
| Pseudomonas sp. S08-1 | 0.46 | OH686_13545 | | RidA/YER057c/UK114 superfamily protein | 0.20 | OH686_20875 | | histidinol-phosphate transaminase | low | > 80 |
| Dyella japonica UNC79MFTsu3.2 | 0.46 | ABZR86_RS11845 | | RidA family protein | 0.30 | ABZR86_RS06725 | | histidinol-phosphate transaminase | low | > 74 |
| Azospirillum brasilense Sp245 | 0.45 | AZOBR_RS32435 | | dfrA | 0.19 | AZOBR_RS20485 | | histidinol-phosphate aminotransferase [EC:2.6.1.9] (from data) | 0.32 | 38 |
| Shewanella oneidensis MR-1 | 0.45 | SO1404 | | endoribonuclease L-PSP, putative (NCBI ptt file) | 0.23 | SO2072 | hisC | histidinol-phosphate aminotransferase (NCBI ptt file) | low | > 76 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.44 | CA264_17590 | | RidA family protein | 0.50 | CA264_05035 | | histidinol-phosphate transaminase | low | > 74 |
| Pseudomonas stutzeri RCH2 | 0.44 | Psest_3818 | | endoribonuclease L-PSP, putative | 0.20 | Psest_1985 | | histidinol-phosphate aminotransferase | low | > 67 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.44 | Xcc-8004.1205.1 | | hypothetical protein | 0.31 | Xcc-8004.2947.1 | | Histidinol-phosphate aminotransferase (EC 2.6.1.9) | low | > 74 |
| Rhodanobacter denitrificans FW104-10B01 | 0.43 | LRK54_RS11800 | | RidA family protein | 0.32 | LRK54_RS01600 | | histidinol-phosphate transaminase | 0.55 | 45 |
| Dechlorosoma suillum PS | 0.43 | Dsui_0312 | | endoribonuclease L-PSP, putative | 0.16 | Dsui_1414 | | histidinol-phosphate aminotransferase | — | — |
| Rhodanobacter sp. FW510-T8 | 0.43 | OKGIIK_12095 | ridA | reactive intermediate/imine deaminase | 0.32 | OKGIIK_04955 | hisC | histidinol-phosphate transaminase | low | > 52 |
| Rhodanobacter denitrificans MT42 | 0.43 | LRK55_RS11525 | | RidA family protein | 0.32 | LRK55_RS01380 | | histidinol-phosphate transaminase | low | > 63 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.43 | Echvi_1327 | | endoribonuclease L-PSP, putative | 0.52 | Echvi_2458 | | histidinol-phosphate aminotransferase | low | > 79 |
| Paraburkholderia sabiae LMG 24235 | 0.42 | QEN71_RS41190 | | RidA family protein | 0.24 | QEN71_RS27860 | | histidinol-phosphate transaminase | — | — |
| Alteromonas macleodii MIT1002 | 0.42 | MIT1002_00109 | | Putative reactive intermediate deaminase TdcF | 0.27 | MIT1002_02634 | | Histidinol-phosphate aminotransferase | low | > 70 |
| Kangiella aquimarina DSM 16071 | 0.41 | B158DRAFT_0573 | | endoribonuclease L-PSP, putative | 0.19 | B158DRAFT_2325 | | histidinol-phosphate aminotransferase | low | > 40 |
| Bifidobacterium breve UCC2003 | 0.41 | BBR_RS12070 | | endoribonuclease L-PSP | 0.16 | BBR_RS17050 | | histidinol-phosphate transaminase | low | > 34 |
| Castellaniella sp019104865 MT123 | 0.41 | ABCV34_RS03565 | | Rid family detoxifying hydrolase | 0.19 | ABCV34_RS07105 | | histidinol-phosphate transaminase | — | — |
| Shewanella amazonensis SB2B | 0.40 | Sama_0263 | | YjgF-like protein (RefSeq) | 0.20 | Sama_1943 | | histidinol-phosphate aminotransferase (RefSeq) | 0.67 | 27 |
| Ralstonia solanacearum IBSBF1503 | 0.40 | RALBFv3_RS20925 | | endoribonuclease L-PSP | 0.22 | RALBFv3_RS06840 | | histidinol-phosphate transaminase | — | — |
| Shewanella loihica PV-4 | 0.40 | Shew_3500 | | putative endoribonuclease L-PSP (RefSeq) | 0.24 | Shew_2199 | | histidinol-phosphate aminotransferase (RefSeq) | 0.74 | 19 |
| Ralstonia solanacearum UW163 | 0.40 | UW163_RS22060 | | endoribonuclease L-PSP | 0.22 | UW163_RS06775 | | histidinol-phosphate transaminase | — | — |
| Acinetobacter radioresistens SK82 | 0.40 | MPMX26_02797 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.16 | MPMX26_02586 | | Histidinol-phosphate aminotransferase | low | > 36 |
| Desulfovibrio vulgaris Miyazaki F | 0.36 | DvMF_1512 | | endoribonuclease L-PSP (RefSeq) | 0.23 | DvMF_0908 | | histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) | — | — |
| Dinoroseobacter shibae DFL-12 | 0.35 | Dshi_0720 | | Endoribonuclease L-PSP (RefSeq) | 0.16 | Dshi_2946 | | histidinol-phosphate aminotransferase (RefSeq) | — | — |
| Variovorax sp. SCN45 | 0.35 | GFF6707 | | RidA/YER057c/UK114 superfamily protein | 0.23 | GFF5348 | | Histidinol-phosphate aminotransferase (EC 2.6.1.9) | low | > 127 |
| Cupriavidus basilensis FW507-4G11 | 0.35 | RR42_RS16710 | | endoribonuclease L-PSP | 0.24 | RR42_RS18910 | | histidinol-phosphate aminotransferase | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.34 | H281DRAFT_03549 | | reactive intermediate/imine deaminase | 0.25 | H281DRAFT_05654 | | histidinol phosphate aminotransferase apoenzyme | low | > 103 |
| Variovorax sp. OAS795 | 0.34 | ABID97_RS26145 | | RidA family protein | 0.23 | ABID97_RS23145 | | histidinol-phosphate transaminase | low | > 91 |
| Azospirillum sp. SherDot2 | 0.34 | MPMX19_04018 | | 2-aminomuconate deaminase | 0.18 | MPMX19_04389 | | Histidinol-phosphate aminotransferase | — | — |
| Paraburkholderia graminis OAS925 | 0.34 | ABIE53_004706 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.25 | ABIE53_003700 | | histidinol-phosphate aminotransferase | low | > 113 |
| Herbaspirillum seropedicae SmR1 | 0.32 | HSERO_RS05705 | | endoribonuclease L-PSP | 0.23 | HSERO_RS20335 | | histidinol-phosphate aminotransferase | low | > 78 |
| Burkholderia phytofirmans PsJN | 0.32 | BPHYT_RS34350 | | endoribonuclease L-PSP | 0.25 | BPHYT_RS17705 | | histidinol-phosphate aminotransferase | low | > 109 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.32 | GFF3622 | | Bona fide RidA/YjgF/TdcF/RutC subgroup | 0.21 | GFF1313 | | Histidinol-phosphate aminotransferase (EC 2.6.1.9) | low | > 90 |
| Sinorhizobium meliloti 1021 | 0.32 | SM_b21139 | | translation initiation inhibitors | 0.17 | SMa0387 | | histidinol-phosphate aminotransferase | low | > 103 |
| Agrobacterium fabrum C58 | 0.32 | Atu2498 | | hypothetical protein | 0.15 | Atu3612 | | histidinol-phosphate aminotransferase | — | — |
| Ralstonia solanacearum GMI1000 | 0.31 | RS_RS23660 | | RidA family protein | 0.22 | RS_RS14785 | | histidinol-phosphate aminotransferase 1 | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.30 | CCNA_02886 | | RutC-family pyrimidine utilization protein C | 0.19 | CCNA_02306 | | histidinol-phosphate aminotransferase | low | > 67 |
| Caulobacter crescentus NA1000 | 0.30 | CCNA_02886 | | RutC-family pyrimidine utilization protein C | 0.19 | CCNA_02306 | | histidinol-phosphate aminotransferase | low | > 66 |
| Ralstonia sp. UNC404CL21Col | 0.30 | ABZR87_RS05790 | | RidA family protein | 0.21 | ABZR87_RS02495 | | histidinol-phosphate transaminase | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.29 | RPSI07_RS05465 | | RidA family protein | 0.22 | RPSI07_RS10395 | | histidinol-phosphate transaminase | — | — |
| Rhizobium sp. OAE497 | 0.27 | ABIE40_RS21405 | | RidA family protein | 0.16 | ABIE40_RS17595 | | histidinol-phosphate transaminase | low | > 107 |
| Acidovorax sp. GW101-3H11 | 0.27 | Ac3H11_699 | | RidA/YER057c/UK114 superfamily, group 2, YoaB-like protein | 0.19 | Ac3H11_4729 | | histidinol-phosphate transaminase (EC 2.6.1.9) (from data) | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.27 | Ga0059261_1670 | | Putative translation initiation inhibitor, yjgF family | 0.19 | Ga0059261_2299 | | histidinol-phosphate aminotransferase | low | > 68 |
| Rhodopseudomonas palustris CGA009 | 0.24 | TX73_018610 | | RidA family protein | 0.18 | TX73_023035 | | histidinol-phosphate transaminase | — | — |
| Rhodospirillum rubrum S1H | 0.23 | Rru_A1174 | | Endoribonuclease L-PSP (NCBI) | 0.18 | Rru_A3264 | | Histidinol-phosphate aminotransferase (NCBI) | low | > 58 |
| Magnetospirillum magneticum AMB-1 | 0.20 | AMB_RS19400 | | RidA family protein | 0.19 | AMB_RS20110 | | histidinol-phosphate aminotransferase | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.20 | A4249_RS08755 | | RidA family protein | 0.16 | A4249_RS11450 | | histidinol-phosphate transaminase | low | > 48 |
Not shown: 3 genomes with orthologs for BT1336 only; 3 genomes with orthologs for BT0202 only