Conservation of cofitness between b0004 and b3770 in Escherichia coli BW25113

93 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b0004 thrC threonine synthase (NCBI) 1.0 b3770 ilvE branched-chain amino acid aminotransferase (NCBI) 0.91 16
Escherichia fergusonii Becca 1.00 EFB2_04039 Threonine synthase 1.00 EFB2_04866 Branched-chain-amino-acid aminotransferase low > 86
Escherichia coli ECOR27 1.00 NOLOHH_03430 thrC threonine synthase 1.00 NOLOHH_06780 ilvE branched-chain-amino-acid transaminase low > 57
Escherichia coli ECRC98 1.00 JDDGAC_14695 thrC threonine synthase 1.00 JDDGAC_18265 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli ECRC99 1.00 KEDOAH_17055 thrC threonine synthase 1.00 KEDOAH_13505 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli ECRC102 1.00 NIAGMN_08950 thrC threonine synthase 1.00 NIAGMN_12400 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli BL21 1.00 ECD_00004 L-threonine synthase 1.00 ECD_03648 branched-chain amino acid aminotransferase 0.62 26
Escherichia coli ECRC101 1.00 MCAODC_01615 thrC threonine synthase 1.00 MCAODC_05150 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli ECRC101 1.00 OKFHMN_11100 thrC threonine synthase 1.00 OKFHMN_14645 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli ECRC62 1.00 BNILDI_08170 thrC threonine synthase 1.00 BNILDI_04745 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03656 Threonine synthase 1.00 OHPLBJKB_04283 Branched-chain-amino-acid aminotransferase low > 73
Escherichia coli ECOR38 0.99 HEPCGN_09105 thrC threonine synthase 1.00 HEPCGN_13355 ilvE branched-chain-amino-acid transaminase low > 85
Escherichia coli Nissle 1917 0.99 ECOLIN_RS00020 threonine synthase 1.00 ECOLIN_RS21660 branched-chain-amino-acid transaminase low > 52
Enterobacter asburiae PDN3 0.93 EX28DRAFT_3616 threonine synthase 0.98 EX28DRAFT_4442 branched-chain amino acid aminotransferase, group I 0.53 24
Enterobacter sp. TBS_079 0.93 MPMX20_00712 Threonine synthase 0.99 MPMX20_04500 Branched-chain-amino-acid aminotransferase low > 85
Klebsiella michiganensis M5al 0.92 BWI76_RS04255 threonine synthase 0.97 BWI76_RS00970 branched chain amino acid aminotransferase 0.54 88
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF1080 Threonine synthase (EC 4.2.3.1) 0.98 GFF2902 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 78
Rahnella sp. WP5 0.85 EX31_RS03935 threonine synthase 0.90 EX31_RS15000 branched-chain amino acid transaminase 0.91 64
Serratia liquefaciens MT49 0.84 IAI46_03040 threonine synthase 0.92 IAI46_24350 branched-chain-amino-acid transaminase low > 86
Pantoea sp. MT58 0.81 IAI47_16205 threonine synthase 0.91 IAI47_01030 branched-chain amino acid transaminase 0.96 5
Dickeya dadantii 3937 0.80 DDA3937_RS18405 threonine synthase 0.91 DDA3937_RS20160 branched-chain-amino-acid transaminase 0.76 35
Dickeya dianthicola ME23 0.80 DZA65_RS19475 threonine synthase 0.91 DZA65_RS21340 branched-chain amino acid transaminase 0.69 14
Erwinia tracheiphila SCR3 0.79 LU632_RS02620 thrC threonine synthase 0.90 LU632_RS24405 branched-chain amino acid transaminase — —
Dickeya dianthicola 67-19 0.79 HGI48_RS18335 threonine synthase 0.90 HGI48_RS20300 branched-chain-amino-acid transaminase low > 71
Pectobacterium carotovorum WPP14 0.79 HER17_RS02805 threonine synthase 0.90 HER17_RS01070 branched-chain amino acid transaminase 0.82 71
Vibrio cholerae E7946 ATCC 55056 0.68 CSW01_11965 threonine synthase 0.75 CSW01_00145 branched-chain-amino-acid transaminase low > 62
Alteromonas macleodii MIT1002 0.65 MIT1002_03084 Threonine synthase 0.17 MIT1002_00377 Branched-chain-amino-acid aminotransferase 2 0.90 41
Shewanella loihica PV-4 0.58 Shew_1081 threonine synthase (RefSeq) 0.68 Shew_0291 branched-chain amino acid aminotransferase (RefSeq) 0.93 33
Shewanella sp. ANA-3 0.56 Shewana3_1141 threonine synthase (RefSeq) 0.19 Shewana3_3830 branched-chain amino acid aminotransferase (RefSeq) 0.86 68
Shewanella oneidensis MR-1 0.55 SO3413 thrC threonine synthase (NCBI ptt file) 0.19 SO0340 ilvE branched-chain amino acid aminotransferase (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.55 Sama_0907 threonine synthase (RefSeq) 0.19 Sama_3299 branched-chain amino acid aminotransferase (RefSeq) low > 62
Phocaeicola vulgatus CL09T03C04 0.42 HMPREF1058_RS14730 threonine synthase 0.18 HMPREF1058_RS02220 branched-chain amino acid aminotransferase 0.69 61
Phocaeicola dorei CL03T12C01 0.42 ABI39_RS10440 threonine synthase 0.18 ABI39_RS01415 branched-chain amino acid aminotransferase 0.63 60
Bacteroides thetaiotaomicron VPI-5482 0.41 BT2401 threonine synthase (NCBI ptt file) 0.19 BT3892 branched-chain amino acid aminotransferase (NCBI ptt file) — —
Bacteroides ovatus ATCC 8483 0.41 BACOVA_03023 threonine synthase 0.30 BACOVA_03679 branched-chain-amino-acid transaminase low > 94
Bacteroides stercoris CC31F 0.41 HMPREF1181_RS00050 threonine synthase 0.19 HMPREF1181_RS06865 branched-chain amino acid aminotransferase low > 56
Echinicola vietnamensis KMM 6221, DSM 17526 0.40 Echvi_2002 threonine synthase 0.18 Echvi_2202 branched-chain amino acid aminotransferase, group II low > 79
Parabacteroides merdae CL09T00C40 0.40 HMPREF1078_RS10395 threonine synthase 0.19 HMPREF1078_RS07855 branched-chain amino acid aminotransferase low > 61
Pedobacter sp. GW460-11-11-14-LB5 0.40 CA265_RS23465 threonine synthase 0.29 CA265_RS15785 branched-chain-amino-acid transaminase low > 88
Mucilaginibacter yixingensis YX-36 DSM 26809 0.40 ABZR88_RS18960 threonine synthase 0.16 ABZR88_RS22095 branched-chain amino acid aminotransferase — —
Xanthomonas campestris pv. campestris strain 8004 0.31 Xcc-8004.2954.1 Threonine synthase (EC 4.2.3.1) 0.19 Xcc-8004.4199.1 Branched-chain amino acid aminotransferase (EC 2.6.1.42) 0.70 74
Lysobacter sp. OAE881 0.30 ABIE51_RS17530 threonine synthase 0.55 ABIE51_RS16505 branched-chain amino acid transaminase low > 62
Caulobacter crescentus NA1000 Δfur 0.29 CCNA_03510 threonine synthase 0.31 CCNA_03024 branched-chain amino acid aminotransferase — —
Caulobacter crescentus NA1000 0.29 CCNA_03510 threonine synthase 0.31 CCNA_03024 branched-chain amino acid aminotransferase — —
Rhodanobacter denitrificans MT42 0.28 LRK55_RS09995 threonine synthase 0.56 LRK55_RS11755 branched-chain amino acid transaminase low > 63
Dyella japonica UNC79MFTsu3.2 0.28 ABZR86_RS15975 threonine synthase (EC 4.2.3.1) (from data) 0.56 ABZR86_RS15965 branched-chain amino acid transaminase 0.98 3
Rhodanobacter denitrificans FW104-10B01 0.28 LRK54_RS10355 threonine synthase 0.56 LRK54_RS12020 branched-chain amino acid transaminase low > 59
Pseudomonas syringae pv. syringae B728a ΔmexB 0.28 Psyr_1291 L-threonine synthase 0.22 Psyr_1148 branched chain amino acid aminotransferase apoenzyme — —
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_3142 Threonine synthase (EC 4.2.3.1) 0.21 Pf6N2E2_477 Branched-chain amino acid aminotransferase (EC 2.6.1.42) — —
Pseudomonas fluorescens FW300-N2E3 0.28 AO353_04350 threonine synthase 0.20 AO353_26655 branched-chain amino acid aminotransferase — —
Pseudomonas stutzeri RCH2 0.28 Psest_3125 threonine synthase 0.46 Psest_0450 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) — —
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_06370 threonine synthase 0.21 AO356_22970 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) — —
Rhodanobacter sp. FW510-T8 0.28 OKGIIK_13570 thrC threonine synthase 0.56 OKGIIK_11840 ilvE branched-chain amino acid transaminase low > 52
Bosea sp. OAE506 0.28 ABIE41_RS22985 threonine synthase 0.28 ABIE41_RS11405 branched-chain amino acid aminotransferase — —
Pseudomonas syringae pv. syringae B728a 0.28 Psyr_1291 L-threonine synthase 0.22 Psyr_1148 branched chain amino acid aminotransferase apoenzyme — —
Pseudomonas putida KT2440 0.27 PP_1471 Threonine synthase 0.19 PP_3511 Branched-chain-amino-acid aminotransferase — —
Pseudomonas fluorescens FW300-N1B4 0.27 Pf1N1B4_3014 Threonine synthase (EC 4.2.3.1) 0.22 Pf1N1B4_4476 Branched-chain amino acid aminotransferase (EC 2.6.1.42) — —
Pseudomonas fluorescens GW456-L13 0.27 PfGW456L13_1724 Threonine synthase (EC 4.2.3.1) 0.27 PfGW456L13_4923 Branched-chain amino acid aminotransferase (EC 2.6.1.42) — —
Pseudomonas simiae WCS417 0.27 PS417_22880 threonine synthase 0.21 PS417_17565 branched-chain amino acid aminotransferase — —
Pseudomonas sp. RS175 0.27 PFR28_00334 Threonine synthase 0.21 PFR28_02449 putative branched-chain-amino-acid aminotransferase — —
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS24545 threonine synthase 0.21 PFLU_RS19375 branched-chain amino acid aminotransferase — —
Pseudomonas fluorescens SBW25 0.27 PFLU_RS24545 threonine synthase 0.21 PFLU_RS19375 branched-chain amino acid aminotransferase low > 109
Pseudomonas sp. S08-1 0.27 OH686_17765 threonine synthase 0.46 OH686_09695 branched-chain amino acid aminotransferase low > 80
Dinoroseobacter shibae DFL-12 0.26 Dshi_1146 threonine synthase (RefSeq) 0.26 Dshi_3301 branched-chain amino acid aminotransferase (RefSeq) — —
Sinorhizobium meliloti 1021 0.26 SMc00077 threonine synthase 0.21 SMc02896 branched-chain amino acid aminotransferase — —
Azospirillum brasilense Sp245 0.26 AZOBR_RS10545 threonine synthase 0.31 AZOBR_RS16425 branched-chain amino acid aminotransferase — —
Phaeobacter inhibens DSM 17395 0.26 PGA1_c06310 threonine synthase ThrC 0.29 PGA1_c34110 branched-chain-amino-acid aminotransferase IlvE — —
Azospirillum sp. SherDot2 0.26 MPMX19_00671 Threonine synthase 0.18 MPMX19_02406 Branched-chain-amino-acid aminotransferase — —
Rhodopseudomonas palustris CGA009 0.25 TX73_004325 threonine synthase 0.18 TX73_022650 branched-chain amino acid aminotransferase — —
Magnetospirillum magneticum AMB-1 0.25 AMB_RS17140 threonine synthase 0.31 AMB_RS02850 branched-chain amino acid aminotransferase — —
Rhizobium sp. OAE497 0.25 ABIE40_RS04230 threonine synthase 0.19 ABIE40_RS22240 branched-chain amino acid aminotransferase — —
Marinobacter adhaerens HP15 0.25 HP15_765 threonine synthase 0.43 HP15_436 branched-chain-amino-acid aminotransferase — —
Rhodospirillum rubrum S1H 0.25 Rru_A3233 Threonine synthase (NCBI) 0.32 Rru_A2223 Branched-chain amino acid aminotransferase I (NCBI) — —
Agrobacterium fabrum C58 0.25 Atu0787 threonine synthase 0.18 Atu0871 branched-chain-amino-acid aminotransferase — —
Castellaniella sp019104865 MT123 0.24 ABCV34_RS02300 threonine synthase 0.45 ABCV34_RS07930 branched-chain amino acid transaminase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.24 A4249_RS00020 threonine synthase 0.27 A4249_RS09820 branched-chain amino acid aminotransferase — —
Sphingomonas koreensis DSMZ 15582 0.23 Ga0059261_1999 threonine synthase 0.23 Ga0059261_3811 branched-chain amino acid aminotransferase, group II 0.98 12
Variovorax sp. OAS795 0.23 ABID97_RS25760 threonine synthase 0.44 ABID97_RS03790 branched-chain amino acid transaminase — —
Herbaspirillum seropedicae SmR1 0.22 HSERO_RS10470 threonine synthase 0.44 HSERO_RS03330 branched-chain amino acid aminotransferase — —
Variovorax sp. SCN45 0.22 GFF2800 Threonine synthase (EC 4.2.3.1) 0.44 GFF5079 Branched-chain amino acid aminotransferase (EC 2.6.1.42) — —
Acidovorax sp. GW101-3H11 0.22 Ac3H11_1505 Threonine synthase (EC 4.2.3.1) 0.46 Ac3H11_3369 Branched-chain amino acid aminotransferase (EC 2.6.1.42) — —
Cupriavidus basilensis FW507-4G11 0.22 RR42_RS12535 threonine synthase 0.20 RR42_RS25890 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) — —
Paraburkholderia graminis OAS925 0.22 ABIE53_002027 threonine synthase 0.43 ABIE53_003432 branched-chain amino acid aminotransferase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.22 GFF3936 Threonine synthase (EC 4.2.3.1) 0.46 GFF1835 Branched-chain amino acid aminotransferase (EC 2.6.1.42) — —
Paraburkholderia bryophila 376MFSha3.1 0.21 H281DRAFT_00811 L-threonine synthase 0.43 H281DRAFT_04193 branched chain amino acid aminotransferase apoenzyme — —
Dechlorosoma suillum PS 0.21 Dsui_2904 threonine synthase 0.47 Dsui_2030 branched-chain amino acid aminotransferase, group I — —
Ralstonia sp. UNC404CL21Col 0.21 ABZR87_RS05865 threonine synthase 0.25 ABZR87_RS18540 branched-chain amino acid aminotransferase low > 80
Paraburkholderia sabiae LMG 24235 0.21 QEN71_RS22400 threonine synthase 0.44 QEN71_RS02410 branched-chain amino acid transaminase low > 153
Ralstonia solanacearum GMI1000 0.21 RS_RS06660 threonine synthase 0.45 RS_RS02840 branched-chain amino acid transaminase — —
Burkholderia phytofirmans PsJN 0.21 BPHYT_RS08960 threonine synthase 0.43 BPHYT_RS16285 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) low > 109
Bifidobacterium breve UCC2003 0.20 BBR_RS14070 threonine synthase 0.17 BBR_RS15210 branched-chain amino acid aminotransferase low > 34
Ralstonia solanacearum PSI07 0.20 RPSI07_RS17485 threonine synthase 0.45 RPSI07_RS21175 branched-chain amino acid transaminase — —
Ralstonia solanacearum UW163 0.20 UW163_RS13325 threonine synthase 0.46 UW163_RS01455 branched-chain amino acid transaminase — —
Ralstonia solanacearum IBSBF1503 0.20 RALBFv3_RS15880 threonine synthase 0.46 RALBFv3_RS12155 branched-chain amino acid transaminase — —

Not shown: 0 genomes with orthologs for b0004 only; 9 genomes with orthologs for b3770 only