Conservation of cofitness between b3822 and b3341 in Escherichia coli BW25113

95 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3822 recQ ATP-dependent DNA helicase (NCBI) 1.0 b3341 rpsG 30S ribosomal protein S7 (NCBI) 0.21 16
Escherichia coli Nissle 1917 1.00 ECOLIN_RS21935 ATP-dependent DNA helicase RecQ 0.87 ECOLIN_RS19140 30S ribosomal protein S7 — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_04229 ATP-dependent DNA helicase RecQ 0.87 OHPLBJKB_00362 30S ribosomal protein S7 — —
Escherichia fergusonii Becca 1.00 EFB2_04815 ATP-dependent DNA helicase RecQ 0.87 EFB2_00482 30S ribosomal protein S7 — —
Escherichia coli ECRC99 1.00 KEDOAH_13790 recQ ATP-dependent DNA helicase RecQ 0.87 KEDOAH_10815 rpsG 30S ribosomal protein S7 — —
Escherichia coli ECRC62 1.00 BNILDI_05040 recQ ATP-dependent DNA helicase RecQ 0.87 BNILDI_02395 rpsG 30S ribosomal protein S7 — —
Escherichia coli ECRC102 1.00 NIAGMN_12115 recQ ATP-dependent DNA helicase RecQ 0.87 NIAGMN_15095 rpsG 30S ribosomal protein S7 — —
Escherichia coli ECRC98 1.00 JDDGAC_17985 recQ ATP-dependent DNA helicase RecQ 0.87 JDDGAC_20955 rpsG 30S ribosomal protein S7 — —
Escherichia coli ECRC101 1.00 MCAODC_04865 recQ ATP-dependent DNA helicase RecQ 0.87 MCAODC_07855 rpsG 30S ribosomal protein S7 — —
Escherichia coli ECRC101 1.00 OKFHMN_14360 recQ ATP-dependent DNA helicase RecQ 0.87 OKFHMN_17325 rpsG 30S ribosomal protein S7 — —
Escherichia coli ECOR27 1.00 NOLOHH_06490 recQ ATP-dependent DNA helicase RecQ 0.87 NOLOHH_09125 rpsG 30S ribosomal protein S7 — —
Escherichia coli ECOR38 1.00 HEPCGN_13060 recQ ATP-dependent DNA helicase RecQ 0.87 HEPCGN_16155 rpsG 30S ribosomal protein S7 — —
Escherichia coli BL21 1.00 ECD_03701 ATP-dependent DNA helicase 0.87 ECD_03192 30S ribosomal subunit protein S7 — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF248 ATP-dependent DNA helicase RecQ 0.87 GFF3731 SSU ribosomal protein S7p (S5e) — —
Enterobacter sp. TBS_079 0.93 MPMX20_04458 ATP-dependent DNA helicase RecQ 0.86 MPMX20_04234 30S ribosomal protein S7 — —
Enterobacter asburiae PDN3 0.92 EX28DRAFT_4487 ATP-dependent DNA helicase RecQ 0.86 EX28DRAFT_4189 ribosomal protein S7, bacterial/organelle — —
Klebsiella michiganensis M5al 0.92 BWI76_RS01245 DNA helicase RecQ 0.85 BWI76_RS25880 30S ribosomal protein S7 — —
Pectobacterium carotovorum WPP14 0.82 HER17_RS01395 ATP-dependent DNA helicase RecQ 0.85 HER17_RS02035 30S ribosomal protein S7 — —
Erwinia tracheiphila SCR3 0.82 LU632_RS24095 recQ ATP-dependent DNA helicase RecQ 0.86 LU632_RS22685 rpsG 30S ribosomal protein S7 — —
Pantoea sp. MT58 0.82 IAI47_18360 ATP-dependent DNA helicase RecQ 0.85 IAI47_02080 30S ribosomal protein S7 — —
Rahnella sp. WP5 0.81 EX31_RS15210 ATP-dependent DNA helicase RecQ 0.85 EX31_RS04445 30S ribosomal protein S7 — —
Serratia liquefaciens MT49 0.81 IAI46_00770 ATP-dependent DNA helicase RecQ 0.84 IAI46_23465 30S ribosomal protein S7 — —
Dickeya dianthicola ME23 0.80 DZA65_RS21045 ATP-dependent DNA helicase RecQ 0.84 DZA65_RS20535 30S ribosomal protein S7 — —
Dickeya dianthicola 67-19 0.80 HGI48_RS20005 ATP-dependent DNA helicase RecQ 0.84 HGI48_RS19415 30S ribosomal protein S7 — —
Dickeya dadantii 3937 0.80 DDA3937_RS19850 ATP-dependent DNA helicase RecQ 0.84 DDA3937_RS19315 30S ribosomal protein S7 — —
Vibrio cholerae E7946 ATCC 55056 0.67 CSW01_01045 DNA helicase RecQ 0.77 CSW01_01900 30S ribosomal protein S7 — —
Shewanella oneidensis MR-1 0.58 SO4241 recQ ATP-dependent DNA helicase RecQ (NCBI ptt file) 0.74 SO0227 rpsG ribosomal protein S7 (NCBI ptt file) — —
Shewanella sp. ANA-3 0.58 Shewana3_3763 ATP-dependent DNA helicase RecQ (RefSeq) 0.74 Shewana3_0195 30S ribosomal protein S7 (RefSeq) — —
Shewanella amazonensis SB2B 0.58 Sama_0333 ATP-dependent DNA helicase RecQ (RefSeq) 0.72 Sama_0209 30S ribosomal protein S7 (RefSeq) — —
Shewanella loihica PV-4 0.57 Shew_3474 ATP-dependent DNA helicase RecQ (RefSeq) 0.74 Shew_0154 30S ribosomal protein S7 (RefSeq) — —
Alteromonas macleodii MIT1002 0.53 MIT1002_00148 ATP-dependent DNA helicase RecQ 0.73 MIT1002_03730 30S ribosomal protein S7 — —
Pseudomonas fluorescens GW456-L13 0.45 PfGW456L13_4423 ATP-dependent DNA helicase RecQ 0.62 PfGW456L13_1250 SSU ribosomal protein S7p (S5e) — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.45 CA264_07560 DNA helicase RecQ 0.48 CA264_19330 30S ribosomal protein S7 — —
Pseudomonas putida KT2440 0.45 PP_4516 ATP-dependent DNA 3 0.62 PP_0450 30S ribosomal protein S7 — —
Pseudomonas sp. RS175 0.45 PFR28_00788 ATP-dependent DNA helicase RecQ 0.62 PFR28_04006 30S ribosomal protein S7 — —
Herbaspirillum seropedicae SmR1 0.45 HSERO_RS02465 ATP-dependent DNA helicase RecQ 0.58 HSERO_RS00550 30S ribosomal protein S7 — —
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_04050 ATP-dependent DNA helicase RecQ 0.62 AO356_14625 30S ribosomal protein S7 — —
Pseudomonas fluorescens FW300-N2E2 0.45 Pf6N2E2_2645 ATP-dependent DNA helicase RecQ 0.62 Pf6N2E2_4854 SSU ribosomal protein S7p (S5e) — —
Pseudomonas fluorescens FW300-N1B4 0.45 Pf1N1B4_3533 ATP-dependent DNA helicase RecQ 0.62 Pf1N1B4_2578 SSU ribosomal protein S7p (S5e) — —
Pseudomonas fluorescens SBW25 0.45 PFLU_RS21920 DNA helicase RecQ 0.62 PFLU_RS27185 30S ribosomal protein S7 — —
Pseudomonas fluorescens SBW25-INTG 0.45 PFLU_RS21920 DNA helicase RecQ 0.62 PFLU_RS27185 30S ribosomal protein S7 — —
Pseudomonas simiae WCS417 0.45 PS417_19950 ATP-dependent DNA helicase RecQ 0.62 PS417_25555 30S ribosomal protein S7 — —
Phocaeicola vulgatus CL09T03C04 0.44 HMPREF1058_RS14585 DNA helicase RecQ 0.46 HMPREF1058_RS09360 30S ribosomal protein S7 — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.44 ABZR88_RS20865 DNA helicase RecQ 0.48 ABZR88_RS14595 30S ribosomal protein S7 — —
Rhodanobacter denitrificans FW104-10B01 0.44 LRK54_RS13000 DNA helicase RecQ 0.53 LRK54_RS03595 30S ribosomal protein S7 — —
Pseudomonas fluorescens FW300-N2E3 0.44 AO353_18430 ATP-dependent DNA helicase RecQ 0.62 AO353_07020 30S ribosomal protein S7 — —
Dechlorosoma suillum PS 0.44 Dsui_3092 ATP-dependent DNA helicase RecQ 0.60 Dsui_0363 ribosomal protein S7, bacterial/organelle — —
Phocaeicola dorei CL03T12C01 0.44 ABI39_RS10235 DNA helicase RecQ 0.46 ABI39_RS03745 30S ribosomal protein S7 — —
Pseudomonas stutzeri RCH2 0.44 Psest_1869 ATP-dependent DNA helicase RecQ 0.61 Psest_3610 ribosomal protein S7, bacterial/organelle — —
Dyella japonica UNC79MFTsu3.2 0.44 ABZR86_RS19925 DNA helicase RecQ 0.53 ABZR86_RS21925 30S ribosomal protein S7 — —
Pseudomonas syringae pv. syringae B728a 0.44 Psyr_3738 ATP-dependent DNA helicase RecQ 0.62 Psyr_4552 SSU ribosomal protein S7P — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.44 Psyr_3738 ATP-dependent DNA helicase RecQ 0.62 Psyr_4552 SSU ribosomal protein S7P — —
Rhodanobacter denitrificans MT42 0.44 LRK55_RS12700 DNA helicase RecQ 0.53 LRK55_RS03345 30S ribosomal protein S7 — —
Agrobacterium fabrum C58 0.44 Atu0061 ATP-dependent DNA helicase 0.53 Atu1950 30S ribosomal protein S7 — —
Marinobacter adhaerens HP15 0.44 HP15_1718 ATP-dependent DNA helicase RecQ 0.63 HP15_376 30S ribosomal protein S7 — —
Rhodanobacter sp. FW510-T8 0.44 OKGIIK_02375 recQ DNA helicase RecQ 0.53 OKGIIK_10485 rpsG 30S ribosomal protein S7 — —
Rhizobium sp. OAE497 0.44 ABIE40_RS12745 DNA helicase RecQ 0.54 ABIE40_RS07835 30S ribosomal protein S7 — —
Pseudomonas sp. S08-1 0.43 OH686_20670 ATP-dependent DNA helicase RecQ 0.62 OH686_15335 ribosomal protein S7 — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.43 Echvi_0784 ATP-dependent DNA helicase RecQ 0.49 Echvi_0258 ribosomal protein S7, bacterial/organelle — —
Variovorax sp. OAS795 0.43 ABID97_RS03395 DNA helicase RecQ 0.58 ABID97_RS00685 30S ribosomal protein S7 — —
Azospirillum brasilense Sp245 0.42 AZOBR_RS02840 ATP-dependent DNA helicase RecQ 0.53 AZOBR_RS11490 30S ribosomal protein S7 — —
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS19310 ATP-dependent DNA helicase RecQ 0.60 RR42_RS19300 30S ribosomal protein S7 — —
Magnetospirillum magneticum AMB-1 0.42 AMB_RS21505 DNA helicase RecQ 0.55 AMB_RS15790 30S ribosomal protein S7 — —
Sinorhizobium meliloti 1021 0.42 SMc01566 ATP-dependent DNA helicase 0.53 SMc01313 30S ribosomal protein S7 — —
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.1476.1 ATP-dependent DNA helicase RecQ 0.54 Xcc-8004.4149.1 SSU ribosomal protein S7p (S5e) — —
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS18145 ATP-dependent DNA helicase RecQ 0.60 BPHYT_RS18135 30S ribosomal protein S7 — —
Bacteroides stercoris CC31F 0.42 HMPREF1181_RS14110 DNA helicase RecQ 0.46 HMPREF1181_RS00540 30S ribosomal protein S7 — —
Ralstonia sp. UNC404CL21Col 0.42 ABZR87_RS02880 DNA helicase RecQ 0.59 ABZR87_RS02860 30S ribosomal protein S7 — —
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS28295 DNA helicase RecQ 0.60 QEN71_RS28285 30S ribosomal protein S7 — —
Phaeobacter inhibens DSM 17395 0.42 PGA1_c31900 ATP-dependent DNA helicase RecQ 0.56 PGA1_c01500 30S ribosomal protein S7 — —
Paraburkholderia graminis OAS925 0.42 ABIE53_003792 ATP-dependent DNA helicase RecQ 0.60 ABIE53_003790 small subunit ribosomal protein S7 — —
Rhodopseudomonas palustris CGA009 0.42 TX73_025080 DNA helicase RecQ 0.54 TX73_016825 30S ribosomal protein S7 — —
Azospirillum sp. SherDot2 0.42 MPMX19_00123 ATP-dependent DNA helicase RecQ 0.53 MPMX19_00388 30S ribosomal protein S7 — —
Ralstonia solanacearum UW163 0.41 UW163_RS06400 DNA helicase RecQ 0.59 UW163_RS06410 30S ribosomal protein S7 — —
Ralstonia solanacearum IBSBF1503 0.41 RALBFv3_RS07220 DNA helicase RecQ 0.59 RALBFv3_RS07210 30S ribosomal protein S7 — —
Paraburkholderia bryophila 376MFSha3.1 0.41 H281DRAFT_06595 ATP-dependent DNA helicase RecQ 0.60 H281DRAFT_06597 SSU ribosomal protein S7P — —
Bacteroides thetaiotaomicron VPI-5482 0.41 BT1848 ATP-dependent DNA helicase recQ (NCBI ptt file) 0.45 BT2730 30S ribosomal protein S7 (NCBI ptt file) — —
Bacteroides ovatus ATCC 8483 0.41 BACOVA_04594 ATP-dependent DNA helicase RecQ 0.46 BACOVA_01031 30S ribosomal protein S7 — —
Dinoroseobacter shibae DFL-12 0.41 Dshi_3334 ATP-dependent DNA helicase RecQ (RefSeq) 0.55 Dshi_0272 ribosomal protein S7 (RefSeq) — —
Ralstonia solanacearum PSI07 0.41 RPSI07_RS10025 DNA helicase RecQ 0.59 RPSI07_RS10035 30S ribosomal protein S7 — —
Ralstonia solanacearum GMI1000 0.41 RS_RS15155 DNA helicase RecQ 0.59 RS_RS15145 30S ribosomal protein S7 — —
Castellaniella sp019104865 MT123 0.41 ABCV34_RS07985 DNA helicase RecQ 0.61 ABCV34_RS11490 30S ribosomal protein S7 — —
Lysobacter sp. OAE881 0.41 ABIE51_RS05145 DNA helicase RecQ 0.55 ABIE51_RS05820 30S ribosomal protein S7 — —
Acidovorax sp. GW101-3H11 0.41 Ac3H11_3308 ATP-dependent DNA helicase RecQ 0.58 Ac3H11_2140 SSU ribosomal protein S7p (S5e) — —
Parabacteroides merdae CL09T00C40 0.41 HMPREF1078_RS01195 DNA helicase RecQ 0.47 HMPREF1078_RS16995 30S ribosomal protein S7 — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.40 GFF1958 ATP-dependent DNA helicase RecQ 0.60 GFF1804 SSU ribosomal protein S7p (S5e) — —
Variovorax sp. SCN45 0.40 GFF6415 ATP-dependent DNA helicase RecQ 0.58 GFF3629 SSU ribosomal protein S7p (S5e) — —
Rhodospirillum rubrum S1H 0.40 Rru_A0089 ATP-dependent DNA helicase RecQ (NCBI) 0.55 Rru_A2692 Ribosomal protein S7 (NCBI) — —
Bosea sp. OAE506 0.40 ABIE41_RS04160 DNA helicase RecQ 0.54 ABIE41_RS14530 30S ribosomal protein S7 — —
Pedobacter sp. GW460-11-11-14-LB5 0.38 CA265_RS08905 DNA helicase RecQ 0.49 CA265_RS17015 30S ribosomal protein S7 — —
Sphingomonas koreensis DSMZ 15582 0.37 Ga0059261_2261 ATP-dependent DNA helicase RecQ 0.57 Ga0059261_3724 ribosomal protein S7, bacterial/organelle — —
Brevundimonas sp. GW460-12-10-14-LB2 0.36 A4249_RS14575 DNA helicase RecQ 0.55 A4249_RS08060 30S ribosomal protein S7 — —
Fusobacterium nucleatum SB010 0.34 HUW76_07235 DNA helicase RecQ 0.46 HUW76_09545 30S ribosomal protein S7 — —
Bifidobacterium breve UCC2003 0.34 BBR_RS13150 DNA helicase RecQ 0.50 BBR_RS13490 30S ribosomal protein S7 low > 34
Caulobacter crescentus NA1000 0.33 CCNA_03578 ATP-dependent DNA helicase recQ 0.56 CCNA_03305 SSU ribosomal protein S7P — —
Caulobacter crescentus NA1000 Δfur 0.33 CCNA_03578 ATP-dependent DNA helicase recQ 0.56 CCNA_03305 SSU ribosomal protein S7P — —

Not shown: 0 genomes with orthologs for b3822 only; 6 genomes with orthologs for b3341 only