Homologs of SMa0089 from Sinorhizobium meliloti 1021

hypothetical protein
SEED: Putative translation initiation inhibitor, yjgF family

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sinorhizobium meliloti 1021 SMa0089 hypothetical protein sig. 100 100
o Agrobacterium fabrum C58 Atu1475 hypothetical protein insig. 84 93
o Enterobacter sp. TBS_079 MPMX20_02480 RutC family protein YjgH insig. 84 93
o Escherichia coli ECOR27 NOLOHH_04120 yjgH RutC family protein YjgH insig. 81 94
o Escherichia coli ECRC62 BNILDI_07390 yjgH RutC family protein YjgH insig. 81 94
o Escherichia coli BW25113 b4248 yjgH predicted mRNA endoribonuclease (NCBI) insig. 81 94
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2536 RidA/YER057c/UK114 superfamily, group 7, YjgH-like protein insig. 80 93
o Azospirillum sp. SherDot2 MPMX19_03734 RutC family protein YjgH insig. 80 96
o Escherichia coli BL21 ECD_04115 UPF0131 family protein insig. 80 94
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03788 RutC family protein YjgH insig. 80 94
o Escherichia coli ECRC100 OKFHMN_11860 ridA Endoribonuclease L-PSP cofit 79 94
o Escherichia coli ECRC101 MCAODC_02365 ridA Endoribonuclease L-PSP insig. 79 94
o Escherichia coli ECRC102 NIAGMN_09710 ridA Endoribonuclease L-PSP cofit 79 94
o Escherichia coli ECRC98 JDDGAC_15500 ridA Endoribonuclease L-PSP insig. 79 94
o Escherichia coli ECRC99 KEDOAH_16295 ridA Endoribonuclease L-PSP no data 79 94
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS07135 RidA family protein cofit 80 93
o Rhodospirillum rubrum S1H Rru_A1711 Endoribonuclease L-PSP (NCBI) insig. 79 95
o Azospirillum brasilense Sp245 AZOBR_RS18540 endoribonuclease L-PSP no data 76 94
o Rhizobium sp. OAE497 ABIE40_RS04205 RidA family protein insig. 73 95
o Lysobacter sp. OAE881 ABIE51_RS10300 RidA family protein insig. 78 93
o Acinetobacter baumannii LAC-4 RR41_RS04140 RidA family protein insig. 78 91
o Rhodopseudomonas palustris CGA009 TX73_012895 RidA family protein insig. 74 93
o Bosea sp. OAE506 ABIE41_RS18885 RidA family protein insig. 69 96
o Pseudomonas sp. DMC3 GFF2977 RutC family protein YjgH cofit 66 96
o Ralstonia sp. UNC404CL21Col ABZR87_RS16800 RidA family protein insig. 64 96
o Pseudomonas fluorescens FW300-N2C3 AO356_22385 enamine deaminase RidA insig. 63 95
o Pseudomonas sp. S08-1 OH686_18475 RidA/YER057c/UK114 superfamily, group 7, YjgH-like protein insig. 63 93
o Variovorax sp. OAS795 ABID97_RS28685 RidA family protein insig. 62 96
o Pseudomonas aeruginosa MRSN321 DY961_RS28350 RidA family protein insig. 63 95
o Pseudomonas aeruginosa PA14 IKLFDK_21515 RidA family protein insig. 63 95
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_347 Endoribonuclease L-PSP insig. 62 94
o Pseudomonas segetis P6 ACVTMO_RS20125 RidA family protein insig. 61 96
o Variovorax sp. SCN45 GFF138 RidA/YER057c/UK114 superfamily, group 7, YjgH-like protein insig. 61 96
o Klebsiella michiganensis M5al BWI76_RS18475 hypothetical protein insig. 61 93
o Pseudomonas stutzeri RCH2 Psest_3002 Putative translation initiation inhibitor, yjgF family insig. 60 96
o Pseudomonas orientalis W4I3 QF045_RS20890 RidA family protein insig. 62 92
o Paraburkholderia graminis OAS925 ABIE53_001473 enamine deaminase RidA (YjgF/YER057c/UK114 family) insig. 60 93
o Pseudomonas sp. RS175 PFR28_02561 RutC family protein YjgH insig. 61 96
o Pseudomonas aeruginosa PUPa3 DQ20_RS49195 RidA family protein insig. 61 95
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4708.1 Putative translation initiation inhibitor, yjgF family insig. 61 96
o Enterobacter asburiae PDN3 EX28DRAFT_0570 Putative translation initiation inhibitor, yjgF family insig. 60 93
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS09760 RidA family protein insig. 57 93
o Klebsiella pneumoniae MKP103 KDGMDA_25720 RidA family protein sig. 60 93
o Dechlorosoma suillum PS Dsui_3425 putative translation initiation inhibitor, yjgF family no data 60 93
o Cupriavidus basilensis FW507-4G11 RR42_RS24575 endoribonuclease L-PSP insig. 41 90
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01079 Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family insig. 40 94
o Herbaspirillum seropedicae SmR1 HSERO_RS06570 endoribonuclease L-PSP insig. 42 93
  Acidovorax sp. GW101-3H11 Ac3H11_3269 Putative translation initiation inhibitor, yjgF family insig. 68 50
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01492 Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family insig. 38 96
o Pseudomonas syringae pv. syringae B728a Psyr_2243 Endoribonuclease L-PSP sig. 38 91
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2243 Endoribonuclease L-PSP insig. 38 91
  Acidovorax sp. GW101-3H11 Ac3H11_3270 Putative translation initiation inhibitor, yjgF family insig. 56 49
o Pseudomonas simiae WCS417 PS417_07990 endoribonuclease L-PSP insig. 36 91
  Ralstonia solanacearum PSI07 RPSI07_RS14130 RidA family protein insig. 36 81
o Ralstonia solanacearum UW163 UW163_RS18330 RidA family protein insig. 36 81
  Ralstonia solanacearum GMI1000 RS_RS23495 RidA family protein no data 33 94
o Ralstonia solanacearum GMI1000 RS_RS23625 RidA family protein no data 33 94
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2434 Putative translation initiation inhibitor, yjgF family insig. 37 86
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS21460 hypothetical protein insig. 67 35
  Pectobacterium carotovorum WPP14 HER17_RS18785 RidA family protein insig. 33 87
  Enterobacter sp. TBS_079 MPMX20_01193 RutC family protein YjgH insig. 28 80
  Sinorhizobium meliloti 1021 SMc01714 hypothetical protein insig. 35 86
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_179 Endoribonuclease L-PSP no data 35 78
  Pseudomonas segetis P6 ACVTMO_RS00185 RidA family protein strong 39 69
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2329 Endoribonuclease L-PSP insig. 34 78
  Acinetobacter baumannii LAC-4 RR41_RS01650 RidA family protein sig. 39 69
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1205.1 hypothetical protein cofit 36 76
  Lysobacter sp. OAE881 ABIE51_RS01130 Rid family hydrolase insig. 29 89
  Marinobacter adhaerens HP15 HP15_306 YjgF-like protein strong 34 76
  Alteromonas macleodii MIT1002 MIT1002_00109 Putative reactive intermediate deaminase TdcF strong 33 80
  Shewanella loihica PV-4 Shew_3500 putative endoribonuclease L-PSP (RefSeq) strong 36 69
  Lysobacter sp. OAE881 ABIE51_RS17260 RidA family protein strong 34 76
  Sinorhizobium meliloti 1021 SMa2289 hypothetical protein insig. 39 68
  Xanthobacter sp. DMC5 GFF465 Putative aminoacrylate peracid reductase RutC insig. 48 41
  Bosea sp. OAE506 ABIE41_RS06350 RidA family protein insig. 33 87
  Acinetobacter radioresistens SK82 MPMX26_02797 2-iminobutanoate/2-iminopropanoate deaminase strong 40 69
  Kangiella aquimarina DSM 16071 B158DRAFT_0573 endoribonuclease L-PSP, putative sig. 33 80
  Shewanella oneidensis MR-1 SO0358 endoribonuclease L-PSP, putative (NCBI ptt file) strong 35 69
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS17100 hypothetical protein sig. 34 78
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS11845 RidA family protein strong 34 78
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4209 Translation initiation inhibitor insig. 44 43
  Shewanella sp. ANA-3 Shewana3_3813 putative endoribonuclease L-PSP (RefSeq) cofit 35 69
o Pseudomonas putida KT2440 PP_3975 conserved protein of unknown function insig. 29 80
  Pseudomonas sp. RS175 PFR28_03492 hypothetical protein insig. 30 80
o Pseudomonas sp. BP01 JOY50_RS03660 RidA family protein insig. 29 80
  Pseudomonas fluorescens FW300-N2C3 AO356_22550 hypothetical protein insig. 29 80
  Dechlorosoma suillum PS Dsui_0312 endoribonuclease L-PSP, putative no data 34 69
  Pseudomonas syringae pv. syringae B728a Psyr_3399 Endoribonuclease L-PSP insig. 48 43
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3399 Endoribonuclease L-PSP insig. 48 43
  Desulfovibrio vulgaris Hildenborough JW710 DVU2647 endoribonuclease, L-PSP family (TIGR) sig. 37 76
  Pseudomonas stutzeri RCH2 Psest_3818 endoribonuclease L-PSP, putative strong 35 69
  Pseudomonas sp. S08-1 OH686_13545 RidA/YER057c/UK114 superfamily protein strong 34 69
  Cellulophaga baltica 18 M666_RS12150 RidA family protein insig. 30 78
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS22825 reactive intermediate/imine deaminase strong 36 78
  Pseudomonas sp. S08-1 OH686_23590 RidA/YER057c/UK114 superfamily protein insig. 31 72
  Pseudomonas putida KT2440 PP_5303 aminoacrylate/iminopropionate hydrolase/deaminase strong 35 69
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4360 Bona fide RidA/YjgF/TdcF/RutC subgroup strong 35 69
  Pseudomonas sp. RS175 PFR28_04425 2-iminobutanoate/2-iminopropanoate deaminase strong 34 69
  Cupriavidus basilensis FW507-4G11 RR42_RS34135 hypothetical protein insig. 34 78
  Pseudomonas syringae pv. syringae B728a Psyr_0208 endoribonuclease L-PSP strong 35 69