Homologs of PP_4322 from Pseudomonas putida KT2440

holocytochrome c synthetase
SEED: Cytochrome c heme lyase subunit CcmF
KEGG: cytochrome c-type biogenesis protein CcmF

139 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_4322 holocytochrome c synthetase no data 100 100
o Pseudomonas sp. BP01 JOY50_RS00480 heme lyase CcmF/NrfE family subunit no data 98 99
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4311 Cytochrome c heme lyase subunit CcmF no data 86 100
o Pseudomonas sp. SVBP6 COO64_RS25715 heme lyase CcmF/NrfE family subunit no data 90 99
o Pseudomonas fluorescens FW300-N2E3 AO353_18875 cytochrome C biogenesis protein CcmF no data 85 100
o Pseudomonas fluorescens SBW25 PFLU_RS08670 heme lyase CcmF/NrfE family subunit cofit 86 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS08670 heme lyase CcmF/NrfE family subunit strong 86 100
o Pseudomonas simiae WCS417 PS417_08715 cytochrome C biogenesis protein CcmF no data 85 100
o Pseudomonas sp. RS175 PFR28_00870 Cytochrome c-type biogenesis protein CcmF no data 86 100
o Pseudomonas orientalis W4I3 QF045_RS11430 heme lyase CcmF/NrfE family subunit no data 85 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3644 Cytochrome c heme lyase subunit CcmF no data 85 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2555 Cytochrome c heme lyase subunit CcmF no data 85 100
o Pseudomonas sp. DMC3 GFF2490 Cytochrome c-type biogenesis protein CcmF no data 85 100
o Pseudomonas fluorescens FW300-N2C3 AO356_03635 cytochrome C biogenesis protein CcmF no data 85 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_01875 Cytochrome c-type biogenesis protein CcmF no data 85 100
o Pseudomonas segetis P6 ACVTMO_RS15395 heme lyase CcmF/NrfE family subunit no data 81 99
o Pseudomonas syringae pv. syringae B728a Psyr_3388 Cytochrome c-type biogenesis protein CcmF no data 82 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3388 Cytochrome c-type biogenesis protein CcmF no data 82 99
o Pseudomonas sp. S08-1 OH686_02635 cytochrome c-type biogenesis protein CcmF no data 82 100
o Pseudomonas stutzeri RCH2 Psest_1759 c-type cytochrome biogenesis protein CcmF no data 80 99
o Pseudomonas aeruginosa MRSN321 DY961_RS05510 heme lyase CcmF/NrfE family subunit no data 83 99
o Pseudomonas aeruginosa PA14 IKLFDK_07040 Cytochrome c-type biogenesis protein CcmF no data 83 99
o Pseudomonas aeruginosa PUPa3 DQ20_RS47280 heme lyase CcmF/NrfE family subunit no data 83 99
o Vibrio cholerae E7946 ATCC 55056 CSW01_10265 c-type cytochrome biogenesis protein CcmF strong 56 97
o Dechlorosoma suillum PS Dsui_1172 c-type cytochrome biogenesis protein CcmF no data 58 97
o Kangiella aquimarina DSM 16071 B158DRAFT_1328 c-type cytochrome biogenesis protein CcmF strong 54 99
o Serratia liquefaciens MT49 IAI46_18085 heme lyase CcmF/NrfE family subunit insig. 55 97
o Rahnella sp. WP5 EX31_RS19745 heme lyase CcmF/NrfE family subunit insig. 55 97
o Klebsiella pneumoniae MRSN742743 KFA93_RS15200 heme lyase CcmF/NrfE family subunit insig. 57 97
o Klebsiella pneumoniae MKP103 KDGMDA_23845 cytochrome c maturation protein CcmE insig. 57 97
o Pectobacterium carotovorum WPP14 HER17_RS09055 heme lyase CcmF/NrfE family subunit insig. 56 97
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS00045 heme lyase CcmF/NrfE family subunit insig. 55 98
o Pantoea sp. MT58 IAI47_06090 heme lyase CcmF/NrfE family subunit cofit 55 98
o Lysobacter sp. OAE881 ABIE51_RS08700 heme lyase CcmF/NrfE family subunit strong 59 98
o Marinobacter adhaerens HP15 HP15_2281 cytochrome c assembly protein no data 60 93
o Alteromonas macleodii MIT1002 MIT1002_00965 Cytochrome c-type biogenesis protein CcmF no data 53 98
o Shewanella loihica PV-4 Shew_0193 cytochrome c-type biogenesis protein CcmF (RefSeq) strong 54 97
o Erwinia amylovora T8 OLJFJH_11100 heme lyase NrfEFG subunit NrfE insig. 56 97
o Shewanella amazonensis SB2B Sama_0248 cytochrome c-type biogenesis protein CcmF (RefSeq) strong 55 97
o Shewanella sp. ANA-3 Shewana3_0234 cytochrome c-type biogenesis protein CcmF (RefSeq) strong 54 98
o Escherichia coli ECOR38 HEPCGN_22570 ccmF cytochrome c-type biogenesis heme lyase CcmF insig. 56 97
o Escherichia coli ECRC100 OKFHMN_23305 ccmF cytochrome c-type biogenesis heme lyase CcmF insig. 56 97
o Escherichia coli ECRC101 MCAODC_14355 ccmF cytochrome c-type biogenesis heme lyase CcmF insig. 56 97
o Escherichia coli ECRC102 NIAGMN_21070 ccmF cytochrome c-type biogenesis heme lyase CcmF insig. 56 97
o Escherichia coli ECRC62 BNILDI_13800 ccmF cytochrome c-type biogenesis heme lyase CcmF cofit 56 97
o Escherichia coli ECRC98 JDDGAC_27265 ccmF cytochrome c-type biogenesis heme lyase CcmF insig. 56 97
o Escherichia coli ECRC99 KEDOAH_04880 ccmF cytochrome c-type biogenesis heme lyase CcmF no data 56 97
o Escherichia coli BL21 ECD_02123 heme lyase, CcmF subunit sig. 55 97
o Escherichia coli ECOR27 NOLOHH_14880 ccmF cytochrome c-type biogenesis heme lyase CcmF insig. 55 97
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01515 Cytochrome c-type biogenesis protein CcmF sig. 55 97
o Escherichia coli BW25113 b2196 ccmF heme lyase, CcmF subunit (NCBI) insig. 55 97
o Escherichia fergusonii Becca EFB2_01660 Cytochrome c-type biogenesis protein CcmF insig. 55 97
o Escherichia coli Nissle 1917 ECOLIN_RS12835 cytochrome c-type biogenesis heme lyase CcmF no data 55 97
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS16065 heme lyase CcmF/NrfE family subunit no data 58 98
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS06445 heme lyase CcmF/NrfE family subunit no data 57 93
o Shewanella oneidensis MR-1 SO0266 ccmF-1 cytochrome c-type biogenesis protein CcmF (NCBI ptt file) strong 53 98
o Rhodanobacter denitrificans MT42 LRK55_RS15815 heme lyase CcmF/NrfE family subunit insig. 58 97
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2342.1 Cytochrome c heme lyase subunit CcmF no data 60 97
o Rhodanobacter sp. FW510-T8 OKGIIK_08585 ccmF c-type cytochrome biogenesis protein CcmF no data 58 93
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3190.1 Cytochrome c heme lyase subunit CcmF insig. 55 97
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4877 Cytochrome c heme lyase subunit CcmF no data 55 97
o Magnetospirillum magneticum AMB-1 AMB_RS21250 heme lyase CcmF/NrfE family subunit no data 52 97
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS12730 heme lyase CcmF/NrfE family subunit no data 58 94
  Dinoroseobacter shibae DFL-12 Dshi_3775 cytochrome c-type biogenesis protein CcmF (RefSeq) no data 49 98
  Dinoroseobacter shibae DFL-12 Dshi_4051 cytochrome c-type biogenesis protein CcmF (RefSeq) no data 49 98
o Azospirillum brasilense Sp245 AZOBR_RS00740 heme lyase subunit CcmF no data 49 98
o Rhodospirillum rubrum S1H Rru_A0035 Cytochrome c-type biogenesis protein CcmF (NCBI) no data 52 98
  Dinoroseobacter shibae DFL-12 Dshi_3411 cytochrome c-type biogenesis protein CcmF (RefSeq) sig. 49 97
o Azospirillum sp. SherDot2 MPMX19_02533 Cytochrome c-type biogenesis protein CcmF no data 49 99
o Agrobacterium fabrum C58 Atu0975 cytochrome c-type synthesis protein no data 49 97
o Rhizobium sp. OAE497 ABIE40_RS05685 heme lyase CcmF/NrfE family subunit strong 49 97
o Sinorhizobium meliloti 1021 SMc02363 cytochrome C-type biogenesis transmembrane protein sig. 49 99
o Phaeobacter inhibens DSM 17395 PGA1_c17010 cytochrome c-type biogenesis protein CcmF no data 49 98
o Rhodopseudomonas palustris CGA009 TX73_009900 heme lyase CcmF/NrfE family subunit no data 48 97
o Bosea sp. OAE506 ABIE41_RS21455 heme lyase CcmF/NrfE family subunit no data 47 97
o Xanthobacter sp. DMC5 GFF1779 Cytochrome c-type biogenesis protein CcmF no data 46 97
o Caulobacter crescentus NA1000 CCNA_02848 heme chaperone-apocytochrome heme-lyase strong 43 96
o Caulobacter crescentus NA1000 Δfur CCNA_02848 heme chaperone-apocytochrome heme-lyase cofit 43 96
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS10825 heme lyase CcmF/NrfE family subunit no data 46 89
  Shewanella oneidensis MR-1 SO0478 ccmF-2 cytochrome c-type biogenesis protein CcmF (NCBI ptt file) insig. 41 97
o Sphingobium sp. HT1-2 GFF83 Cytochrome c heme lyase subunit CcmF no data 43 97
  Shewanella sp. ANA-3 Shewana3_0488 cytochrome c-type biogenesis protein CcmF (RefSeq) insig. 40 98
  Shewanella loihica PV-4 Shew_0347 cytochrome c assembly protein (RefSeq) insig. 42 90
  Pectobacterium carotovorum WPP14 HER17_RS09015 heme lyase CcmF/NrfE family subunit cofit 41 95
o Sphingomonas koreensis DSMZ 15582 Ga0059261_0172 Cytochrome c biogenesis factor strong 41 92
  Escherichia coli Nissle 1917 ECOLIN_RS23575 heme lyase CcmF/NrfE family subunit insig. 48 54
  Escherichia fergusonii Becca EFB2_04515 Cytochrome c-type biogenesis protein CcmF insig. 48 54
  Escherichia coli ECRC100 OKFHMN_12800 nrfF heme lyase NrfEFG subunit NrfF cofit 46 59
  Escherichia coli ECRC101 MCAODC_03310 nrfF heme lyase NrfEFG subunit NrfF insig. 46 59
  Escherichia coli ECRC102 NIAGMN_10645 nrfF heme lyase NrfEFG subunit NrfF insig. 46 59
  Escherichia coli ECRC98 JDDGAC_16435 nrfF heme lyase NrfEFG subunit NrfF insig. 46 59
  Escherichia coli ECRC99 KEDOAH_15350 nrfF heme lyase NrfEFG subunit NrfF no data 46 59
  Escherichia coli BW25113 b4074 nrfE heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfE (NCBI) insig. 48 54
  Escherichia coli ECOR27 NOLOHH_05050 nrfF heme lyase NrfEFG subunit NrfF insig. 46 59
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03966 Cytochrome c-type biogenesis protein CcmF insig. 46 59
  Escherichia coli BL21 ECD_03946 heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfE insig. 48 54
  Escherichia coli ECRC62 BNILDI_06475 ccmF Cytochrome c biogenesis protein CcmF insig. 45 59
  Escherichia coli ECOR38 HEPCGN_11425 ccmF Cytochrome c biogenesis protein CcmF insig. 48 54
  Desulfovibrio vulgaris Hildenborough JW710 DVU1050 ccmF cytochrome c-type biogenesis protein CcmF (TIGR) no data 33 95
  Desulfovibrio vulgaris Miyazaki F DvMF_3132 cytochrome c assembly protein (RefSeq) no data 33 95
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1457 Cytochrome c heme lyase subunit CcmF insig. 45 63
  Desulfovibrio vulgaris Miyazaki F DvMF_0826 cytochrome c assembly protein (RefSeq) insig. 30 90
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_18700 cytochrome C biogenesis protein no data 33 56
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0800 Cytochrome c biogenesis factor no data 31 70
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS03500 cytochrome C biogenesis protein no data 27 85
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS07885 cytochrome c biogenesis protein CcsA no data 28 81
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1457 Cytochrome c heme lyase subunit CcmF insig. 36 21
  Escherichia coli Nissle 1917 ECOLIN_RS23575 heme lyase CcmF/NrfE family subunit insig. 34 22
  Escherichia fergusonii Becca EFB2_04515 Cytochrome c-type biogenesis protein CcmF insig. 34 22
  Escherichia coli ECOR38 HEPCGN_11425 ccmF Cytochrome c biogenesis protein CcmF insig. 34 22
  Escherichia coli ECRC100 OKFHMN_12800 nrfF heme lyase NrfEFG subunit NrfF cofit 34 22
  Escherichia coli ECRC101 MCAODC_03310 nrfF heme lyase NrfEFG subunit NrfF insig. 34 22
  Escherichia coli ECRC102 NIAGMN_10645 nrfF heme lyase NrfEFG subunit NrfF insig. 34 22
  Escherichia coli ECRC98 JDDGAC_16435 nrfF heme lyase NrfEFG subunit NrfF insig. 34 22
  Escherichia coli ECRC99 KEDOAH_15350 nrfF heme lyase NrfEFG subunit NrfF no data 34 22
  Escherichia coli ECOR27 NOLOHH_05050 nrfF heme lyase NrfEFG subunit NrfF insig. 34 22
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03966 Cytochrome c-type biogenesis protein CcmF insig. 34 22
  Escherichia coli BW25113 b4074 nrfE heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfE (NCBI) insig. 34 22
  Escherichia coli BL21 ECD_03946 heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfE insig. 34 22
  Escherichia coli ECRC62 BNILDI_06475 ccmF Cytochrome c biogenesis protein CcmF insig. 33 22
  Methylophilus sp. DMC18 GFF1549 Cytochrome c biogenesis protein CcsA no data 30 22
  Paraburkholderia sabiae LMG 24235 QEN71_RS28095 c-type cytochrome biogenesis protein CcsB strong 28 25
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05603 cytochrome c-type biogenesis protein CcsB no data 29 22
  Paraburkholderia graminis OAS925 ABIE53_003752 cytochrome c-type biogenesis protein CcsB insig. 29 22
  Cupriavidus basilensis FW507-4G11 RR42_RS19080 cytochrome C biogenesis protein no data 28 22
  Burkholderia phytofirmans PsJN BPHYT_RS17945 cytochrome C biogenesis protein cofit 28 22
  Herbaspirillum seropedicae SmR1 HSERO_RS00775 cytochrome C biogenesis protein no data 29 22
  Ralstonia sp. UNC404CL21Col ABZR87_RS02670 c-type cytochrome biogenesis protein CcsB no data 26 29
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS07020 c-type cytochrome biogenesis protein CcsB strong 27 29
  Ralstonia solanacearum UW163 UW163_RS06595 c-type cytochrome biogenesis protein CcsB insig. 27 29
  Ralstonia solanacearum GMI1000 RS_RS14960 c-type cytochrome biogenesis protein CcsB no data 27 29
  Ralstonia solanacearum PSI07 RPSI07_RS10220 c-type cytochrome biogenesis protein CcsB sig. 27 29
  Mycobacterium tuberculosis H37Rv Rv0529 Possible cytochrome C-type biogenesis protein CcsA no data 33 14
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1349 Cytochrome c-type biogenesis protein CcsA/ResC no data 33 13
  Acidovorax sp. GW101-3H11 Ac3H11_2975 Cytochrome c-type biogenesis protein CcsA/ResC no data 33 13
  Variovorax sp. OAS795 ABID97_RS23320 c-type cytochrome biogenesis protein CcsB strong 34 13
  Variovorax sp. SCN45 GFF5312 Cytochrome c-type biogenesis protein CcsA/ResC no data 34 13
  Bacteroides thetaiotaomicron VPI-5482 BT4430 cytochrome c biogenesis protein (ccsA) (NCBI ptt file) insig. 24 36
  Bacteroides thetaiotaomicron VPI-5482 BT1605 cytochrome c biogenesis protein (NCBI ptt file) insig. 29 23