Homologs of PP_4009 from Pseudomonas putida KT2440

ATP-dependent Clp protease adapter protein ClpS
SEED: ATP-dependent Clp protease adaptor protein ClpS
KEGG: ATP-dependent Clp protease adaptor protein ClpS

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
o Pseudomonas sp. BP01 JOY50_RS06560 clpS ATP-dependent Clp protease adapter ClpS insig. 100 100
  Pseudomonas putida KT2440 PP_4009 ATP-dependent Clp protease adapter protein ClpS strong 100 100
o Pseudomonas sp. SVBP6 COO64_RS24205 clpS ATP-dependent Clp protease adapter ClpS insig. 93 100
o Pseudomonas syringae pv. syringae B728a Psyr_3184 ATP-dependent Clp protease adaptor protein ClpS sig. 89 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3184 ATP-dependent Clp protease adaptor protein ClpS insig. 89 100
o Pseudomonas fluorescens FW300-N2C3 AO356_22145 ATP-dependent Clp protease adaptor ClpS strong 88 100
o Pseudomonas fluorescens FW300-N2E3 AO353_27680 ATP-dependent Clp protease adaptor ClpS strong 88 100
o Pseudomonas simiae WCS417 PS417_16515 Clp protease ClpS strong 89 100
o Pseudomonas fluorescens SBW25 PFLU_RS18555 ATP-dependent Clp protease adapter ClpS strong 88 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS18555 ATP-dependent Clp protease adapter ClpS strong 88 100
o Pseudomonas sp. S08-1 OH686_00230 ATP-dependent Clp protease adaptor protein ClpS cofit 83 100
o Pseudomonas aeruginosa PA14 IKLFDK_13155 ATP-dependent Clp protease adapter ClpS sig. 82 100
o Pseudomonas stutzeri RCH2 Psest_2026 Uncharacterized conserved protein strong 82 100
  Pseudomonas sp. DMC3 GFF1524 ATP-dependent Clp protease adapter protein ClpS insig. 94 68
  Pseudomonas sp. RS175 PFR28_02614 ATP-dependent Clp protease adapter protein ClpS strong 94 68
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2645 ATP-dependent Clp protease adaptor protein ClpS sig. 94 68
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4054 ATP-dependent Clp protease adaptor protein ClpS strong 94 68
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_291 ATP-dependent Clp protease adaptor protein ClpS strong 94 68
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS00425 ATP-dependent Clp protease adapter ClpS strong 59 86
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS09725 ATP-dependent Clp protease adapter ClpS sig. 59 87
o Kangiella aquimarina DSM 16071 B158DRAFT_1504 Uncharacterized conserved protein strong 59 91
o Rhodanobacter denitrificans MT42 LRK55_RS00165 ATP-dependent Clp protease adapter ClpS strong 59 86
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS02195 ATP-dependent Clp protease adapter ClpS strong 57 86
o Rhodanobacter sp. FW510-T8 OKGIIK_06885 clpS ATP-dependent Clp protease adapter ClpS sig. 58 85
  Acinetobacter radioresistens SK82 MPMX26_01283 ATP-dependent Clp protease adapter protein ClpS strong 61 84
o Lysobacter sp. OAE881 ABIE51_RS11495 ATP-dependent Clp protease adapter ClpS strong 58 85
  Alteromonas macleodii MIT1002 MIT1002_01833 ATP-dependent Clp protease adapter protein ClpS insig. 66 75
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2755.1 ATP-dependent Clp protease adaptor protein ClpS insig. 56 87
o Klebsiella michiganensis M5al BWI76_RS09610 ATP-dependent Clp protease adaptor ClpS strong 59 81
o Pectobacterium carotovorum WPP14 HER17_RS12405 ATP-dependent Clp protease adapter ClpS insig. 55 84
o Azospirillum sp. SherDot2 MPMX19_00504 ATP-dependent Clp protease adapter protein ClpS insig. 57 86
o Escherichia coli BL21 ECD_00886 regulatory protein for ClpA substrate specificity insig. 56 81
o Escherichia fergusonii Becca EFB2_03180 ATP-dependent Clp protease adapter protein ClpS insig. 56 81
o Escherichia coli ECOR27 NOLOHH_22185 clpS ATP-dependent Clp protease adapter ClpS insig. 56 81
o Escherichia coli ECOR38 HEPCGN_22895 clpS ATP-dependent Clp protease adapter ClpS cofit 56 81
o Escherichia coli ECRC100 OKFHMN_05790 clpS ATP-dependent Clp protease adapter ClpS cofit 56 81
o Escherichia coli ECRC101 MCAODC_25005 clpS ATP-dependent Clp protease adapter ClpS insig. 56 81
o Escherichia coli ECRC102 NIAGMN_03830 clpS ATP-dependent Clp protease adapter ClpS insig. 56 81
o Escherichia coli ECRC62 BNILDI_20440 clpS ATP-dependent Clp protease adapter ClpS cofit 56 81
o Escherichia coli ECRC98 JDDGAC_09425 clpS ATP-dependent Clp protease adapter ClpS insig. 56 81
o Escherichia coli ECRC99 KEDOAH_22120 clpS ATP-dependent Clp protease adapter ClpS no data 56 81
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02787 ATP-dependent Clp protease adapter protein ClpS insig. 56 81
o Escherichia coli Nissle 1917 ECOLIN_RS04690 ATP-dependent Clp protease adapter ClpS insig. 56 81
o Escherichia coli BW25113 b0881 clpS ATP-dependent Clp protease adaptor protein ClpS (NCBI) insig. 56 81
  Shewanella amazonensis SB2B Sama_2057 clpS ATP-dependent Clp protease adaptor protein ClpS (RefSeq) strong 63 76
  Dickeya dianthicola 67-19 HGI48_RS09570 ATP-dependent Clp protease adapter ClpS insig. 62 70
  Dickeya dianthicola ME23 DZA65_RS09880 ATP-dependent Clp protease adapter ClpS insig. 62 70
o Enterobacter asburiae PDN3 EX28DRAFT_2051 Uncharacterized conserved protein cofit 57 81
o Enterobacter sp. TBS_079 MPMX20_01543 ATP-dependent Clp protease adapter protein ClpS insig. 57 81
  Marinobacter adhaerens HP15 HP15_2081 ATP-dependent Clp protease adaptor protein ClpS sig. 71 63
  Dickeya dadantii 3937 DDA3937_RS09555 ATP-dependent Clp protease adapter ClpS cofit 62 70
  Shewanella sp. ANA-3 Shewana3_1752 clpS ATP-dependent Clp protease adaptor protein ClpS (RefSeq) no data 63 70
  Pantoea sp. MT58 IAI47_12950 ATP-dependent Clp protease adapter ClpS cofit 58 78
  Erwinia tracheiphila SCR3 LU632_RS09700 clpS ATP-dependent Clp protease adapter ClpS cofit 62 70
  Shewanella oneidensis MR-1 SO2627 conserved hypothetical protein (NCBI ptt file) cofit 63 70
  Serratia liquefaciens MT49 IAI46_08510 ATP-dependent Clp protease adapter ClpS insig. 57 78
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4902 ATP-dependent Clp protease adaptor protein ClpS insig. 55 81
o Magnetospirillum magneticum AMB-1 AMB_RS05700 ATP-dependent Clp protease adapter ClpS cofit 55 83
o Dechlorosoma suillum PS Dsui_0008 hypothetical protein cofit 51 84
  Vibrio cholerae E7946 ATCC 55056 CSW01_05800 ATP-dependent Clp protease adaptor ClpS insig. 57 76
  Shewanella loihica PV-4 Shew_1565 ATP-dependent Clp protease adaptor protein ClpS (RefSeq) no data 59 75
o Caulobacter crescentus NA1000 CCNA_02552 ATP-dependent Clp protease adaptor protein ClpS strong 53 88
o Caulobacter crescentus NA1000 Δfur CCNA_02552 ATP-dependent Clp protease adaptor protein ClpS cofit 53 88
  Erwinia amylovora T8 OLJFJH_16220 ATP-dependent Clp protease adapter ClpS sig. 56 78
  Rahnella sp. WP5 EX31_RS18565 ATP-dependent Clp protease adapter ClpS insig. 55 78
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS08395 ATP-dependent Clp protease adapter ClpS cofit 53 88
o Ralstonia solanacearum GMI1000 RS_RS12375 ATP-dependent Clp protease adaptor ClpS strong 51 87
o Methylophilus sp. DMC18 GFF1739 ATP-dependent Clp protease adapter protein ClpS insig. 58 86
o Burkholderia phytofirmans PsJN BPHYT_RS15715 ATP-dependent Clp protease adapter protein ClpS sig. 55 83
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04083 ATP-dependent Clp protease adaptor protein ClpS sig. 54 83
o Paraburkholderia graminis OAS925 ABIE53_003307 ATP-dependent Clp protease adaptor protein ClpS strong 54 83
o Ralstonia sp. UNC404CL21Col ABZR87_RS00440 ATP-dependent Clp protease adapter ClpS strong 50 87
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS04815 ATP-dependent Clp protease adaptor ClpS strong 50 87
o Ralstonia solanacearum PSI07 RPSI07_RS12570 ATP-dependent Clp protease adaptor ClpS strong 50 87
o Ralstonia solanacearum UW163 UW163_RS08855 ATP-dependent Clp protease adaptor ClpS insig. 50 87
  Xanthobacter sp. DMC5 GFF1011 ATP-dependent Clp protease adapter protein ClpS insig. 54 83
o Sinorhizobium meliloti 1021 SMc02110 ATP-dependent Clp protease adaptor protein ClpS no data 50 85
  Cupriavidus basilensis FW507-4G11 RR42_RS17110 ATP-dependent Clp protease adapter protein ClpS cofit 53 79
o Rhizobium sp. OAE497 ABIE40_RS08860 ATP-dependent Clp protease adapter ClpS sig. 46 93
o Paraburkholderia sabiae LMG 24235 QEN71_RS03000 ATP-dependent Clp protease adapter ClpS strong 54 83
  Rhodospirillum rubrum S1H Rru_A2110 ATP-dependent Clp protease adaptor protein ClpS (NCBI) cofit 55 78
o Azospirillum brasilense Sp245 AZOBR_RS05180 Clp protease ClpS insig. 60 68
o Rhodopseudomonas palustris CGA009 TX73_016275 ATP-dependent Clp protease adapter ClpS strong 50 88
o Agrobacterium fabrum C58 Atu1363 ATP-dependent Clp protease adaptor protein ClpS no data 52 77
o Phaeobacter inhibens DSM 17395 PGA1_c30000 ATP-dependent Clp protease adaptor protein ClpS sig. 52 84
  Variovorax sp. SCN45 GFF342 ATP-dependent Clp protease adaptor protein ClpS cofit 53 81
o Herbaspirillum seropedicae SmR1 HSERO_RS07025 ATP-dependent Clp protease ClpS strong 51 82
o Variovorax sp. OAS795 ABID97_RS16915 ATP-dependent Clp protease adapter ClpS strong 52 81
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4520 ATP-dependent Clp protease adaptor protein ClpS cofit 57 66
o Sphingomonas koreensis DSMZ 15582 Ga0059261_1285 Uncharacterized conserved protein strong 54 69
  Acidovorax sp. GW101-3H11 Ac3H11_2457 ATP-dependent Clp protease adaptor protein ClpS insig. 56 66
  Castellaniella sp019104865 MT123 ABCV34_RS05310 ATP-dependent Clp protease adapter ClpS insig. 54 77
o Bosea sp. OAE506 ABIE41_RS18240 ATP-dependent Clp protease adapter ClpS sig. 48 86
  Rhodopseudomonas palustris CGA009 TX73_006180 ATP-dependent Clp protease adapter ClpS insig. 47 73
  Rhizobium sp. OAE497 ABIE40_RS13095 ATP-dependent Clp protease adapter ClpS insig. 44 73
  Desulfovibrio vulgaris Hildenborough JW710 DVU1601 ATP-dependent Clp protease adaptor protein ClpS (TIGR) insig. 48 70
  Desulfovibrio vulgaris Miyazaki F DvMF_0459 ATP-dependent Clp protease adaptor protein ClpS (RefSeq) insig. 44 70
  Sinorhizobium meliloti 1021 SMc02694 ATP-dependent Clp protease adaptor insig. 42 72
  Agrobacterium fabrum C58 Atu2232 ATP-dependent Clp protease adaptor protein ClpS insig. 42 69
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS09035 ATP-dependent Clp protease adaptor ClpS sig. 42 65