Homologs of PP_2946 from Pseudomonas putida KT2440

peptidyl-tRNA hydrolase, ribosome rescue factor
SEED: Hypothetical protein YaeJ with similarity to translation release factor
KEGG: ribosome-associated protein

111 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_2946 peptidyl-tRNA hydrolase, ribosome rescue factor insig. 100 100
o Pseudomonas sp. BP01 JOY50_RS03610 arfB alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB no data 96 100
o Pseudomonas sp. RS175 PFR28_03310 Peptidyl-tRNA hydrolase ArfB insig. 86 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4399 Hypothetical protein YaeJ with similarity to translation release factor no data 85 100
o Pseudomonas fluorescens FW300-N2E3 AO353_18560 class I peptide chain release factor insig. 85 100
o Pseudomonas orientalis W4I3 QF045_RS24360 alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB no data 84 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_04582 Peptidyl-tRNA hydrolase ArfB no data 84 100
o Pseudomonas simiae WCS417 PS417_22230 class I peptide chain release factor insig. 84 100
o Pseudomonas fluorescens FW300-N2C3 AO356_18535 class I peptide chain release factor insig. 84 100
o Pseudomonas sp. DMC3 GFF2408 Peptidyl-tRNA hydrolase ArfB cofit 84 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5634 Hypothetical protein YaeJ with similarity to translation release factor insig. 84 100
o Pseudomonas protegens RBAN4 FABNJH_08345 arfB alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB insig. 84 100
o Pseudomonas fluorescens SBW25 PFLU_RS23855 aminoacyl-tRNA hydrolase insig. 82 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS23855 aminoacyl-tRNA hydrolase insig. 82 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3560 Hypothetical protein YaeJ with similarity to translation release factor no data 83 100
o Pseudomonas syringae pv. syringae B728a Psyr_3579 Class I peptide chain release factor no data 81 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3579 Class I peptide chain release factor insig. 81 100
o Pseudomonas segetis P6 ACVTMO_RS14115 arfB alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB insig. 77 100
o Pseudomonas sp. S08-1 OH686_21180 Peptidyl-tRNA hydrolase ArfB insig. 80 100
o Pseudomonas stutzeri RCH2 Psest_2674 Protein chain release factor B insig. 77 100
o Pseudomonas aeruginosa MRSN321 DY961_RS08140 arfB;go_function=translation alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB insig. 77 100
o Pseudomonas aeruginosa PA14 IKLFDK_03845 aminoacyl-tRNA hydrolase sig. 77 100
o Pseudomonas aeruginosa PUPa3 DQ20_RS44670 arfB;go_function=translation alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB insig. 77 100
o Pseudomonas sp. SVBP6 COO64_RS21680 arfB alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB insig. 74 100
o Serratia liquefaciens MT49 IAI46_20110 aminoacyl-tRNA hydrolase insig. 65 99
o Pantoea sp. MT58 IAI47_15415 aminoacyl-tRNA hydrolase insig. 63 99
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS15730 arfB alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB cofit 63 99
o Rahnella sp. WP5 EX31_RS12915 aminoacyl-tRNA hydrolase insig. 62 99
o Acidovorax sp. GW101-3H11 Ac3H11_30 Hypothetical protein YaeJ with similarity to translation release factor insig. 65 93
o Escherichia coli BW25113 b0191 yaeJ hypothetical protein (NCBI) strong 61 99
o Burkholderia phytofirmans PsJN BPHYT_RS07990 peptide chain release factor I no data 65 93
o Escherichia coli ECOR27 NOLOHH_02440 arfB aminoacyl-tRNA hydrolase insig. 61 99
o Escherichia coli ECRC62 BNILDI_09230 arfB aminoacyl-tRNA hydrolase insig. 61 99
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03471 Peptidyl-tRNA hydrolase ArfB insig. 61 99
o Escherichia coli BL21 ECD_00190 alternative stalled-ribosome rescue factor B; peptidyl-tRNA hydrolase, ribosome-attached insig. 61 99
o Escherichia fergusonii Becca EFB2_03852 Peptidyl-tRNA hydrolase ArfB insig. 61 99
o Escherichia coli ECOR38 HEPCGN_08050 arfB aminoacyl-tRNA hydrolase insig. 61 99
o Escherichia coli Nissle 1917 ECOLIN_RS01040 alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB no data 61 99
o Enterobacter asburiae PDN3 EX28DRAFT_3780 RF-1 domain insig. 61 99
o Marinobacter adhaerens HP15 HP15_876 class I peptide chain release factor insig. 63 99
o Variovorax sp. SCN45 GFF2789 Peptidyl-tRNA hydrolase ArfB (EC 3.1.1.29) insig. 67 91
o Klebsiella pneumoniae MKP103 KDGMDA_13575 aminoacyl-tRNA hydrolase insig. 62 99
o Klebsiella pneumoniae MRSN742743 KFA93_RS12030 arfB;go_function=translation alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB sig. 62 99
o Enterobacter sp. TBS_079 MPMX20_00876 Peptidyl-tRNA hydrolase ArfB insig. 59 99
o Paraburkholderia sabiae LMG 24235 QEN71_RS23175 alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB insig. 65 92
o Kangiella aquimarina DSM 16071 B158DRAFT_1383 Protein chain release factor B insig. 65 99
o Variovorax sp. OAS795 ABID97_RS10980 alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB insig. 65 91
o Klebsiella michiganensis M5al BWI76_RS05330 aminoacyl-tRNA hydrolase sig. 60 99
o Escherichia coli ECRC100 OKFHMN_10095 arfB aminoacyl-tRNA hydrolase insig. 59 97
o Escherichia coli ECRC101 MCAODC_00610 arfB aminoacyl-tRNA hydrolase insig. 59 97
o Escherichia coli ECRC102 NIAGMN_07945 arfB aminoacyl-tRNA hydrolase cofit 59 97
o Escherichia coli ECRC98 JDDGAC_13690 arfB aminoacyl-tRNA hydrolase insig. 59 97
o Escherichia coli ECRC99 KEDOAH_18060 arfB aminoacyl-tRNA hydrolase no data 59 97
o Erwinia amylovora T8 OLJFJH_00515 aminoacyl-tRNA hydrolase insig. 59 99
o Paraburkholderia graminis OAS925 ABIE53_001814 ribosome-associated protein insig. 62 93
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05089 ribosome-associated protein insig. 59 97
o Synechocystis sp000284455 PCC 6803 SGL_RS00545 alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB insig. 57 99
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF29 Hypothetical protein YaeJ with similarity to translation release factor insig. 58 99
o Methylophilus sp. DMC18 GFF2565 Peptidyl-tRNA hydrolase ArfB no data 63 89
o Dechlorosoma suillum PS Dsui_2063 protein chain release factor B cofit 57 94
o Shewanella amazonensis SB2B Sama_3193 peptidyl-tRNA hydrolase domain protein (RefSeq) insig. 55 100
o Castellaniella sp019104865 MT123 ABCV34_RS13895 alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB insig. 61 91
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2597 Hypothetical protein YaeJ with similarity to translation release factor no data 62 90
o Rhodopseudomonas palustris CGA009 TX73_022660 alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB insig. 55 100
o Cupriavidus basilensis FW507-4G11 RR42_RS19995 class I peptide chain release factor no data 60 94
o Rhodospirillum rubrum S1H Rru_A0097 Class I peptide chain release factor (NCBI) sig. 53 96
o Shewanella sp. ANA-3 Shewana3_0512 peptidyl-tRNA hydrolase domain protein (RefSeq) cofit 53 96
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_15295 arfB aminoacyl-tRNA hydrolase cofit 54 99
o Erwinia tracheiphila SCR3 LU632_RS19850 arfB aminoacyl-tRNA hydrolase insig. 54 99
o Xanthobacter sp. DMC5 GFF2251 Peptidyl-tRNA hydrolase ArfB no data 55 96
o Shewanella oneidensis MR-1 SO0513 prokaryotic and mitochondrial release factors family protein (NCBI ptt file) insig. 52 96
o Alteromonas macleodii MIT1002 MIT1002_03877 Peptidyl-tRNA hydrolase YaeJ insig. 55 99
o Ralstonia sp. UNC404CL21Col ABZR87_RS02010 alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB insig. 54 96
o Bosea sp. OAE506 ABIE41_RS15920 alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB no data 51 98
o Shewanella loihica PV-4 Shew_3362 hypothetical protein (RefSeq) no data 51 98
o Azospirillum brasilense Sp245 AZOBR_RS09805 peptide chain release factor I insig. 52 99
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.298.1 Hypothetical protein YaeJ with similarity to translation release factor insig. 55 86
o Lysobacter sp. OAE881 ABIE51_RS00210 alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB no data 49 100
o Caulobacter crescentus NA1000 CCNA_01272 peptidyl-tRNA hydrolase family protein insig. 49 100
o Caulobacter crescentus NA1000 Δfur CCNA_01272 peptidyl-tRNA hydrolase family protein cofit 49 100
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS13960 alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB insig. 48 91
o Dinoroseobacter shibae DFL-12 Dshi_3342 Class I peptide chain release factor (RefSeq) strong 52 99
o Phaeobacter inhibens DSM 17395 PGA1_c31970 peptidyl-tRNA hydrolase-like protein insig. 48 99
o Sphingobium sp. HT1-2 GFF1482 Peptidyl-tRNA hydrolase ArfB (EC 3.1.1.29) cofit 45 99
o Rhodanobacter sp. FW510-T8 OKGIIK_13275 arfB aminoacyl-tRNA hydrolase no data 52 98
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS03395 aminoacyl-tRNA hydrolase no data 51 98
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3706 RF-1 domain insig. 45 93
o Agrobacterium fabrum C58 Atu0036 hypothetical protein strong 47 97
o Azospirillum sp. SherDot2 MPMX19_01515 Peptidyl-tRNA hydrolase ArfB no data 49 99
o Rhodanobacter denitrificans MT42 LRK55_RS10265 alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB no data 50 96
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS10625 aminoacyl-tRNA hydrolase no data 50 96
o Magnetospirillum magneticum AMB-1 AMB_RS10115 aminoacyl-tRNA hydrolase cofit 49 94
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS13465 alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB insig. 47 98
  Variovorax sp. SCN45 GFF7802 Peptidyl-tRNA hydrolase ArfB (EC 3.1.1.29) no data 57 58
o Sinorhizobium meliloti 1021 SMc02563 peptidyl-tRNA hydrolase domain-containing protein no data 49 97
o Rhizobium sp. OAE497 ABIE40_RS19420 alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB no data 45 97
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_16580 aminoacyl-tRNA hydrolase insig. 39 89
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS15660 alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB insig. 38 90
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS14570 aminoacyl-tRNA hydrolase sig. 38 85
  Cellulophaga baltica 18 M666_RS04385 alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB insig. 34 88
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2943 Protein chain release factor B insig. 36 99
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS17945 peptide chain release factor 2 no data 31 91
  Phocaeicola dorei CL03T12C01 ABI39_RS00485 peptide chain release factor 1 no data 32 65
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS08030 peptide chain release factor 1 no data 32 65
  Bacteroides ovatus ATCC 8483 BACOVA_05057 peptide chain release factor 1 no data 33 65
  Bacteroides stercoris CC31F HMPREF1181_RS06345 peptide chain release factor 1 no data 32 65
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS13960 peptide chain release factor 1 no data 32 65
  Marinobacter adhaerens HP15 HP15_712 peptide chain release factor 1 no data 30 76
  Bacteroides thetaiotaomicron VPI-5482 BT4210 peptide chain release factor 1 (NCBI ptt file) no data 33 65
  Bacteroides stercoris CC31F HMPREF1181_RS02895 peptide chain release factor 2 no data 30 64
  Shewanella loihica PV-4 Shew_2912 prfA peptide chain release factor 1 (RefSeq) no data 28 76