Homologs of PP_0358 from Pseudomonas putida KT2440

conserved membrane protein of unknown function
SEED: Protein rarD
KEGG: chloramphenicol-sensitive protein RarD

159 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_0358 conserved membrane protein of unknown function sig. 100 100
o Pseudomonas sp. BP01 JOY50_RS17910 rarD EamA family transporter RarD insig. 97 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1142 Protein rarD strong 89 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2480 Protein rarD insig. 88 100
o Pseudomonas protegens RBAN4 FABNJH_28700 rarD EamA family transporter RarD insig. 89 100
o Pseudomonas fluorescens FW300-N2E3 AO353_07550 chloramphenical resistance permease RarD insig. 88 100
o Pseudomonas sp. SVBP6 COO64_RS22750 rarD EamA family transporter RarD insig. 92 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4754 Protein rarD strong 85 100
o Pseudomonas sp. RS175 PFR28_04108 Protein RarD sig. 85 100
o Pseudomonas sp. DMC3 GFF81 Protein RarD cofit 84 100
o Pseudomonas simiae WCS417 PS417_26030 chloramphenical resistance permease RarD insig. 84 100
o Pseudomonas fluorescens SBW25 PFLU_RS27675 EamA family transporter RarD insig. 84 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS27675 EamA family transporter RarD insig. 84 100
o Pseudomonas fluorescens FW300-N2C3 AO356_14110 Putative D-serine transporter (from data) sig. 85 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_05327 Protein RarD cofit 84 100
o Pseudomonas segetis P6 ACVTMO_RS03735 rarD EamA family transporter RarD insig. 77 99
o Pseudomonas orientalis W4I3 QF045_RS00440 EamA family transporter RarD cofit 85 100
o Pseudomonas syringae pv. syringae B728a Psyr_4698 RarD protein insig. 79 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4698 RarD protein insig. 79 100
o Pseudomonas aeruginosa MRSN321 DY961_RS22430 rarD;go_component=plasma EamA family transporter RarD insig. 75 99
o Pseudomonas aeruginosa PA14 IKLFDK_23000 EamA family transporter RarD insig. 75 99
o Pseudomonas aeruginosa PUPa3 DQ20_RS36895 rarD;go_component=plasma EamA family transporter RarD insig. 75 99
o Pseudomonas sp. S08-1 OH686_10385 Uncharacterized inner membrane protein RarD insig. 81 100
o Pseudomonas stutzeri RCH2 Psest_0356 rarD protein insig. 67 100
o Escherichia coli ECRC100 OKFHMN_14375 rarD EamA family transporter RarD cofit 47 100
o Escherichia coli ECRC102 NIAGMN_12130 rarD EamA family transporter RarD cofit 47 100
o Escherichia coli ECRC98 JDDGAC_18000 rarD EamA family transporter RarD insig. 47 100
o Escherichia coli ECRC99 KEDOAH_13775 rarD EamA family transporter RarD no data 47 100
o Escherichia coli ECOR27 NOLOHH_06505 rarD EamA family transporter RarD insig. 47 100
o Escherichia coli ECRC62 BNILDI_05025 rarD EamA family transporter RarD insig. 47 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF245 Protein rarD insig. 49 100
o Escherichia coli ECRC101 MCAODC_04880 rarD EamA family transporter RarD insig. 47 100
o Escherichia coli BL21 ECD_03698 putative chloramphenical resistance permease insig. 47 100
o Escherichia fergusonii Becca EFB2_04818 Protein RarD cofit 47 100
o Escherichia coli ECOR38 HEPCGN_13075 rarD EamA family transporter RarD insig. 47 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04232 Protein RarD cofit 47 100
o Escherichia coli BW25113 b3819 rarD predicted chloramphenical resistance permease (NCBI) insig. 47 100
o Escherichia coli Nissle 1917 ECOLIN_RS21920 EamA family transporter RarD insig. 47 100
o Klebsiella pneumoniae MKP103 KDGMDA_09720 EamA family transporter RarD insig. 49 99
o Klebsiella pneumoniae MRSN742743 KFA93_RS23155 rarD;go_component=membrane|0016020||IEA;inference=COORDINATES EamA family transporter RarD insig. 49 99
o Serratia liquefaciens MT49 IAI46_00755 EamA family transporter RarD insig. 49 99
o Ralstonia sp. UNC404CL21Col ABZR87_RS08060 EamA family transporter RarD insig. 51 100
o Enterobacter sp. TBS_079 MPMX20_04461 Protein RarD insig. 49 99
o Enterobacter asburiae PDN3 EX28DRAFT_4484 rarD protein cofit 48 99
o Pantoea sp. MT58 IAI47_18375 EamA family transporter RarD sig. 49 100
o Shewanella loihica PV-4 Shew_3476 transporter DMT superfamily protein (RefSeq) insig. 47 98
o Shewanella oneidensis MR-1 SO4243 rarD rarD protein (NCBI ptt file) sig. 47 97
o Shewanella sp. ANA-3 Shewana3_3765 transporter DMT superfamily protein (RefSeq) insig. 47 97
o Pectobacterium carotovorum WPP14 HER17_RS01380 EamA family transporter RarD insig. 47 99
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_08755 rarD EamA family transporter RarD insig. 45 99
o Erwinia tracheiphila SCR3 LU632_RS24110 rarD EamA family transporter RarD insig. 45 99
o Shewanella amazonensis SB2B Sama_0332 rarD protein (RefSeq) insig. 49 98
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS18630 rarD EamA family transporter RarD cofit 48 97
o Klebsiella michiganensis M5al BWI76_RS01230 chloramphenicol resistance permease RarD insig. 49 99
o Rahnella sp. WP5 EX31_RS15195 EamA family transporter RarD insig. 47 97
o Dickeya dadantii 3937 DDA3937_RS19865 EamA family transporter RarD insig. 48 99
o Vibrio cholerae E7946 ATCC 55056 CSW01_01040 protein RarD cofit 47 96
o Alteromonas macleodii MIT1002 MIT1002_00151 putative chloramphenical resistance permease RarD insig. 46 99
o Dickeya dianthicola ME23 DZA65_RS21060 EamA family transporter RarD insig. 49 99
o Dickeya dianthicola 67-19 HGI48_RS20020 EamA family transporter RarD insig. 48 99
o Ralstonia solanacearum GMI1000 RS_RS02855 EamA family transporter RarD insig. 47 99
o Acidovorax sp. GW101-3H11 Ac3H11_4000 RarD protein, DMT superfamily transporter insig. 49 95
o Kangiella aquimarina DSM 16071 B158DRAFT_0490 rarD protein insig. 46 97
o Cupriavidus basilensis FW507-4G11 RR42_RS20410 transporter insig. 46 98
o Desulfovibrio vulgaris Hildenborough JW710 DVU2425 rarD rarD protein (TIGR) strong 46 100
o Magnetospirillum magneticum AMB-1 AMB_RS06360 EamA family transporter RarD cofit 45 99
o Paraburkholderia sabiae LMG 24235 QEN71_RS26035 EamA family transporter RarD insig. 44 96
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS12170 EamA family transporter RarD cofit 47 99
o Ralstonia solanacearum UW163 UW163_RS01440 EamA family transporter RarD insig. 47 99
o Herbaspirillum seropedicae SmR1 HSERO_RS23555 membrane protein insig. 44 96
o Marinobacter adhaerens HP15 HP15_2670 RarD protein, DMT superfamily transporter insig. 43 99
o Agrobacterium fabrum C58 Atu1068 hypothetical protein insig. 39 99
o Lysobacter sp. OAE881 ABIE51_RS03205 EamA family transporter RarD insig. 41 98
o Ralstonia solanacearum PSI07 RPSI07_RS21160 EamA family transporter RarD insig. 46 99
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3478 rarD protein insig. 44 98
o Desulfovibrio vulgaris Miyazaki F DvMF_2967 RarD protein, DMT superfamily transporter (RefSeq) insig. 45 93
o Azospirillum brasilense Sp245 AZOBR_RS04315 transporter insig. 44 96
o Rhizobium sp. OAE497 ABIE40_RS06215 EamA family transporter RarD insig. 37 98
o Sphingobium sp. HT1-2 GFF3086 Uncharacterized inner membrane protein RarD cofit 44 99
o Phaeobacter inhibens DSM 17395 PGA1_c33100 protein RarD insig. 40 98
o Sinorhizobium meliloti 1021 SMc02545 hypothetical protein insig. 39 98
o Azospirillum sp. SherDot2 MPMX19_00476 Protein RarD insig. 46 94
o Caulobacter crescentus NA1000 CCNA_00254 RarD family membrane permease strong 42 99
o Caulobacter crescentus NA1000 Δfur CCNA_00254 RarD family membrane permease cofit 42 99
o Rhodospirillum rubrum S1H Rru_A0706 RarD protein (NCBI) insig. 44 95
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4969.1 RarD protein, chloamphenicol sensitive insig. 41 99
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS12695 EamA family transporter RarD cofit 40 98
  Shewanella loihica PV-4 Shew_3322 transporter DMT superfamily protein (RefSeq) strong 33 99
  Pseudomonas sp. RS175 PFR28_04565 Protein RarD strong 33 94
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4231 rarD protein insig. 32 96
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4869 FIG00761799: membrane protein insig. 31 93
  Paraburkholderia sabiae LMG 24235 QEN71_RS21535 EamA family transporter RarD insig. 32 100
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_15360 permease sig. 32 100
  Burkholderia phytofirmans PsJN BPHYT_RS34860 chemotaxis protein insig. 30 97
  Pseudomonas segetis P6 ACVTMO_RS16105 rarD EamA family transporter RarD insig. 32 97
  Paraburkholderia sabiae LMG 24235 QEN71_RS16360 EamA family transporter RarD insig. 29 97
  Pseudomonas sp. S08-1 OH686_05435 Uncharacterized inner membrane protein RarD insig. 34 93
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1172 Chloramphenicol-sensitive protein rarD insig. 30 79
  Acinetobacter radioresistens SK82 MPMX26_02140 Protein RarD insig. 29 79
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03622 chloramphenicol-sensitive protein RarD insig. 29 99
  Serratia liquefaciens MT49 IAI46_16950 EamA family transporter RarD insig. 31 81
  Pseudomonas sp. RS175 PFR28_02473 Protein RarD sig. 29 97
  Pseudomonas aeruginosa PA14 IKLFDK_17825 EamA family transporter RarD sig. 31 98
  Pseudomonas aeruginosa MRSN321 DY961_RS15550 rarD;go_component=plasma EamA family transporter RarD strong 31 98
  Pseudomonas protegens RBAN4 FABNJH_17340 rarD EamA family transporter RarD insig. 32 82
  Pseudomonas syringae pv. syringae B728a Psyr_3361 RarD protein insig. 29 82
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3361 RarD protein insig. 29 82
  Castellaniella sp019104865 MT123 ABCV34_RS08310 EamA family transporter RarD sig. 31 95
  Pseudomonas aeruginosa PUPa3 DQ20_RS41515 rarD;go_component=plasma EamA family transporter RarD sig. 30 98
  Paraburkholderia graminis OAS925 ABIE53_004634 chloramphenicol-sensitive protein RarD insig. 29 99
  Pseudomonas putida KT2440 PP_3436 chloramphenicol-sensitive protein strong 28 98
  Pseudomonas fluorescens FW300-N2E3 AO353_26920 chemotaxis protein insig. 28 82
  Pseudomonas sp. BP01 JOY50_RS24395 rarD EamA family transporter RarD insig. 31 81
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2936 Protein rarD insig. 30 82
  Pseudomonas orientalis W4I3 QF045_RS15950 EamA family transporter RarD insig. 33 63
  Pseudomonas sp. SVBP6 COO64_RS25120 rarD EamA family transporter RarD insig. 29 82
  Herbaspirillum seropedicae SmR1 HSERO_RS17705 chemotaxis protein sig. 32 94
  Pseudomonas fluorescens SBW25 PFLU_RS14615 EamA family transporter RarD insig. 27 97
  Pseudomonas fluorescens SBW25-INTG PFLU_RS14615 EamA family transporter RarD insig. 27 97
  Pseudomonas putida KT2440 PP_3776 putative permease (RarD protein) sig. 33 87
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_458 Protein rarD strong 28 98
  Pseudomonas fluorescens FW300-N2C3 AO356_22850 chemotaxis protein insig. 28 97
  Acinetobacter baumannii LAC-4 RR41_RS04955 EamA family transporter RarD insig. 30 55
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02939 Protein RarD cofit 27 82
  Pseudomonas simiae WCS417 PS417_14000 chemotaxis protein insig. 28 82
  Pseudomonas sp. DMC3 GFF2934 Protein RarD cofit 27 97
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5002 Protein rarD insig. 30 76
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS22830 permease insig. 25 95
  Pseudomonas stutzeri RCH2 Psest_1340 rarD protein insig. 31 79
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5588 Protein rarD insig. 26 98
  Shewanella oneidensis MR-1 SO1692 membrane protein, putative (NCBI ptt file) insig. 25 98
  Shewanella loihica PV-4 Shew_2194 hypothetical protein (RefSeq) insig. 29 79
  Pseudomonas sp. SVBP6 COO64_RS10930 rarD EamA family transporter RarD insig. 26 99
  Shewanella sp. ANA-3 Shewana3_2759 hypothetical protein (RefSeq) insig. 29 86
  Bifidobacterium breve UCC2003 BBR_RS15345 transporter insig. 40 22
  Pseudomonas orientalis W4I3 QF045_RS16355 DMT family transporter insig. 31 65
  Pseudomonas protegens RBAN4 FABNJH_19200 Integral membrane protein, PF00892 family insig. 31 46
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03083 hypothetical protein cofit 32 54
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.989.1 Permeases of the drug/metabolite transporter (DMT) superfamily insig. 24 73
  Rhodanobacter denitrificans MT42 LRK55_RS15450 DMT family transporter insig. 35 31
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS15700 DMT family transporter insig. 35 31
  Pseudomonas sp. SVBP6 COO64_RS02830 DMT family transporter insig. 28 40
  Pseudomonas protegens RBAN4 FABNJH_06980 Permease of the drug/metabolite transporter (DMT) superfamily insig. 34 41
  Pseudomonas simiae WCS417 PS417_13665 multidrug DMT transporter permease insig. 33 27
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2913 Predicted permeases sig. 27 53
  Pseudomonas sp. DMC3 GFF2385 hypothetical protein cofit 30 41
  Dechlorosoma suillum PS Dsui_2899 putative permease, DMT superfamily insig. 29 47
  Pseudomonas fluorescens FW300-N2E3 AO353_24095 multidrug DMT transporter permease insig. 27 66
  Pseudomonas fluorescens SBW25 PFLU_RS15175 DMT family transporter insig. 35 26
  Pseudomonas fluorescens SBW25-INTG PFLU_RS15175 DMT family transporter insig. 35 26
  Pseudomonas sp. DMC3 GFF3542 hypothetical protein cofit 31 45
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS10210 EamA family transporter insig. 26 61
  Pseudomonas aeruginosa MRSN321 DY961_RS05855 DMT family transporter insig. 25 93
  Pseudomonas aeruginosa PA14 IKLFDK_06700 EamA family transporter insig. 25 93
  Pseudomonas aeruginosa PUPa3 DQ20_RS46940 DMT family transporter insig. 25 93
  Pseudomonas sp. BP01 JOY50_RS07770 DMT family transporter insig. 33 23
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1066 Permease of the drug/metabolite transporter (DMT) superfamily insig. 30 45
  Lysobacter sp. OAE881 ABIE51_RS01195 DMT family transporter insig. 26 77
  Pseudomonas fluorescens FW300-N2C3 AO356_25970 multidrug DMT transporter permease insig. 30 45