Homologs of MIT1002_03683 from Alteromonas macleodii MIT1002

Ribosomal RNA small subunit methyltransferase D
SEED: 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)
KEGG: ribosomal RNA small subunit methyltransferase D

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Alteromonas macleodii MIT1002 MIT1002_03683 Ribosomal RNA small subunit methyltransferase D sig. 100 100
o Dickeya dianthicola 67-19 HGI48_RS20760 16S rRNA (guanine(966)-N(2))-methyltransferase cofit 52 82
o Dickeya dadantii 3937 DDA3937_RS00630 16S rRNA (guanine(966)-N(2))-methyltransferase sig. 52 82
o Dickeya dianthicola ME23 DZA65_RS21770 16S rRNA (guanine(966)-N(2))-methyltransferase insig. 52 82
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00238 Ribosomal RNA small subunit methyltransferase D cofit 52 79
o Pectobacterium carotovorum WPP14 HER17_RS00465 16S rRNA (guanine(966)-N(2))-methyltransferase insig. 50 82
  Escherichia fergusonii Becca EFB2_00351 Ribosomal RNA small subunit methyltransferase D cofit 51 79
  Escherichia coli ECOR27 NOLOHH_08500 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase strong 51 79
  Escherichia coli ECOR38 HEPCGN_15525 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase strong 51 79
  Escherichia coli ECRC100 OKFHMN_16695 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase insig. 51 79
  Escherichia coli ECRC101 MCAODC_07225 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase sig. 51 79
  Escherichia coli ECRC102 NIAGMN_14465 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase cofit 51 79
  Escherichia coli ECRC62 BNILDI_03015 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase cofit 51 79
  Escherichia coli ECRC98 JDDGAC_20325 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase insig. 51 79
  Escherichia coli ECRC99 KEDOAH_11445 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase no data 51 79
  Escherichia coli Nissle 1917 ECOLIN_RS19815 16S rRNA (guanine(966)-N(2))-methyltransferase sig. 51 79
  Escherichia coli BW25113 b3465 yhhF predicted methyltransferase (NCBI) strong 51 79
o Shewanella sp. ANA-3 Shewana3_3973 putative methyltransferase (RefSeq) strong 47 84
  Escherichia coli BL21 ECD_03314 16S rRNA m(2)G966 methyltransferase, SAM-dependent sig. 51 79
o Serratia liquefaciens MT49 IAI46_00920 16S rRNA (guanine(966)-N(2))-methyltransferase insig. 49 84
o Rahnella sp. WP5 EX31_RS14835 16S rRNA (guanine(966)-N(2))-methyltransferase insig. 49 82
  Klebsiella michiganensis M5al BWI76_RS26405 16S rRNA (guanine(966)-N(2))-methyltransferase sig. 51 79
  Shewanella oneidensis MR-1 SO4587 conserved hypothetical protein TIGR00095 (NCBI ptt file) strong 48 78
o Vibrio cholerae E7946 ATCC 55056 CSW01_00740 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD insig. 46 85
o Shewanella amazonensis SB2B Sama_3469 hypothetical protein (RefSeq) strong 46 87
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS18045 16S rRNA (guanine(966)-N(2))-methyltransferase cofit 48 84
o Pantoea sp. MT58 IAI47_01535 16S rRNA (guanine(966)-N(2))-methyltransferase sig. 48 84
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_12795 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase no data 47 82
o Erwinia tracheiphila SCR3 LU632_RS19285 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase insig. 47 82
  Enterobacter sp. TBS_079 MPMX20_04342 Ribosomal RNA small subunit methyltransferase D sig. 50 78
  Klebsiella pneumoniae MKP103 KDGMDA_07265 16S rRNA (guanine(966)-N(2))-methyltransferase sig. 50 79
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF540 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) insig. 48 83
  Enterobacter asburiae PDN3 EX28DRAFT_4299 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD insig. 50 78
  Shewanella loihica PV-4 Shew_3607 putative methyltransferase (RefSeq) strong 47 80
o Kangiella aquimarina DSM 16071 B158DRAFT_0443 16S rRNA m(2)G-966 methyltransferase (EC 2.1.1.52) sig. 42 86
  Pseudomonas putida KT2440 PP_5114 putative adenine methyltransferase strong 44 79
  Erwinia amylovora T8 OLJFJH_04385 16S rRNA (guanine(966)-N(2))-methyltransferase cofit 49 78
o Pseudomonas sp. BP01 JOY50_RS20810 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD sig. 42 83
o Pseudomonas sp. DMC3 GFF229 Ribosomal RNA small subunit methyltransferase D cofit 42 81
o Pseudomonas sp. RS175 PFR28_04262 Ribosomal RNA small subunit methyltransferase D strong 42 84
o Pseudomonas sp. S08-1 OH686_14220 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD cofit 41 82
  Rhodanobacter denitrificans MT42 LRK55_RS13080 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD strong 45 79
o Marinobacter adhaerens HP15 HP15_3491 conserved hypothetical protein sig. 39 87
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS13340 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD strong 45 79
  Pseudomonas simiae WCS417 PS417_26825 16S rRNA methyltransferase no data 43 80
o Pseudomonas fluorescens FW300-N2C3 AO356_13320 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD sig. 42 84
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05502 Ribosomal RNA small subunit methyltransferase D cofit 43 80
o Pseudomonas segetis P6 ACVTMO_RS21925 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD sig. 38 84
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2153.1 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) sig. 41 95
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4579 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) strong 41 84
  Pseudomonas stutzeri RCH2 Psest_0255 RNA methyltransferase, RsmD family no data 40 79
  Pseudomonas orientalis W4I3 QF045_RS01225 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD cofit 42 80
o Pseudomonas syringae pv. syringae B728a Psyr_4754 16S rRNA m(2)G-966 methyltransferase insig. 41 83
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4754 16S rRNA m(2)G-966 methyltransferase insig. 41 83
  Pseudomonas fluorescens SBW25 PFLU_RS28470 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD insig. 42 80
  Pseudomonas fluorescens SBW25-INTG PFLU_RS28470 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD strong 42 80
o Pseudomonas fluorescens GW456-L13 PfGW456L13_990 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) sig. 42 81
  Pseudomonas sp. SVBP6 COO64_RS12895 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD insig. 41 79
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS15240 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD insig. 45 80
o Pseudomonas fluorescens FW300-N2E3 AO353_08265 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD strong 39 90
  Rhodanobacter sp. FW510-T8 OKGIIK_02580 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD cofit 43 79
  Pseudomonas aeruginosa MRSN321 DY961_RS21825 rsmD;go_function=16S 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD strong 39 79
  Pseudomonas aeruginosa PA14 IKLFDK_23575 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD strong 39 79
  Pseudomonas aeruginosa PUPa3 DQ20_RS37470 rsmD;go_function=16S 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD sig. 39 79
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS19990 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD strong 42 80
o Burkholderia phytofirmans PsJN BPHYT_RS02815 methyltransferase sig. 40 92
  Lysobacter sp. OAE881 ABIE51_RS15125 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD insig. 44 81
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2320 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) no data 38 90
  Cupriavidus basilensis FW507-4G11 RR42_RS01990 methyltransferase insig. 41 77
  Acinetobacter radioresistens SK82 MPMX26_02312 Ribosomal RNA small subunit methyltransferase D cofit 44 77
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01968 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD sig. 38 91
  Acinetobacter baumannii LAC-4 RR41_RS09020 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD no data 46 74
o Paraburkholderia graminis OAS925 ABIE53_000701 16S rRNA (guanine966-N2)-methyltransferase sig. 39 92
  Paraburkholderia sabiae LMG 24235 QEN71_RS01665 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD strong 40 78
  Ralstonia sp. UNC404CL21Col ABZR87_RS06960 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD sig. 42 79
o Herbaspirillum seropedicae SmR1 HSERO_RS20695 methyltransferase sig. 37 93
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS11070 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD insig. 39 81
o Ralstonia solanacearum UW163 UW163_RS02510 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD no data 39 81
  Ralstonia solanacearum GMI1000 RS_RS01920 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD insig. 42 71
  Methylophilus sp. DMC18 GFF765 Ribosomal RNA small subunit methyltransferase D insig. 40 79
  Ralstonia solanacearum PSI07 RPSI07_RS22230 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD insig. 39 78
  Acidovorax sp. GW101-3H11 Ac3H11_3873 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) no data 50 55
  Caulobacter crescentus NA1000 CCNA_00227 methyltransferase strong 35 79
  Caulobacter crescentus NA1000 Δfur CCNA_00227 methyltransferase insig. 35 79
  Dechlorosoma suillum PS Dsui_1027 RNA methyltransferase, RsmD family insig. 37 78
  Castellaniella sp019104865 MT123 ABCV34_RS10145 RsmD family RNA methyltransferase insig. 36 80
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF817 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) cofit 38 73
  Variovorax sp. OAS795 ABID97_RS23860 RsmD family RNA methyltransferase strong 41 58
  Rhodopseudomonas palustris CGA009 TX73_005985 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD insig. 37 65
  Variovorax sp. SCN45 GFF2320 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) insig. 37 69
  Phaeobacter inhibens DSM 17395 PGA1_c29260 ribosomal RNA small subunit methyltransferase D sig. 38 68
  Desulfovibrio vulgaris Hildenborough JW710 DVU1531 methyltransferase, putative (TIGR) sig. 34 77
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0246 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD insig. 38 67
  Rhizobium sp. OAE497 ABIE40_RS03765 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD sig. 31 77
  Mycobacterium tuberculosis H37Rv Rv2966c Possible methyltransferase (methylase) no data 36 71
  Bifidobacterium breve UCC2003 BBR_RS19290 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD strong 33 78
  Sinorhizobium meliloti 1021 SMc00902 hypothetical protein no data 32 74
  Agrobacterium fabrum C58 Atu0690 hypothetical protein sig. 32 77
  Sphingobium sp. HT1-2 GFF1635 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) insig. 42 53
  Azospirillum brasilense Sp245 AZOBR_RS04500 methyltransferase no data 33 77