Homologs of rsmB from Erwinia tracheiphila HP pepo 2.2

rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
SEED: Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-)
KEGG: ribosomal RNA small subunit methyltransferase B

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_12470 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 100 100
o Erwinia tracheiphila SCR3 LU632_RS22480 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 100 100
o Erwinia amylovora T8 OLJFJH_03720 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 77 100
o Escherichia coli ECOR27 NOLOHH_09320 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB sig. 70 100
o Escherichia coli ECRC62 BNILDI_02200 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 70 100
o Klebsiella pneumoniae MKP103 KDGMDA_06550 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 71 100
o Escherichia coli BL21 ECD_03139 16S rRNA m(5)C967 methyltransferase, SAM-dependent sig. 70 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00415 Ribosomal RNA small subunit methyltransferase B strong 70 100
o Escherichia coli BW25113 b3289 rsmB 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent (NCBI) strong 70 100
o Escherichia coli ECOR38 HEPCGN_16350 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 70 100
o Escherichia coli ECRC100 OKFHMN_17520 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 70 100
o Escherichia coli ECRC101 MCAODC_08050 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB sig. 70 100
o Escherichia coli ECRC102 NIAGMN_15290 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 70 100
o Escherichia coli ECRC98 JDDGAC_21150 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 70 100
o Escherichia coli ECRC99 KEDOAH_10620 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB no data 70 100
o Klebsiella michiganensis M5al BWI76_RS25680 16S rRNA m5C967 methyltransferase strong 70 100
o Enterobacter sp. TBS_079 MPMX20_04196 Ribosomal RNA small subunit methyltransferase B sig. 71 98
o Escherichia fergusonii Becca EFB2_00535 Ribosomal RNA small subunit methyltransferase B insig. 69 100
o Escherichia coli Nissle 1917 ECOLIN_RS18875 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 69 100
o Enterobacter asburiae PDN3 EX28DRAFT_0039 16S rRNA (cytosine(967)-C(5))-methyltransferase cofit 70 98
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS22525 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 70 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2390 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) ## SSU rRNA m5C967 cofit 68 100
o Dickeya dadantii 3937 DDA3937_RS19135 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 69 100
o Pantoea sp. MT58 IAI47_02280 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 69 100
o Dickeya dianthicola 67-19 HGI48_RS19225 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 68 100
o Dickeya dianthicola ME23 DZA65_RS20350 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 68 100
o Serratia liquefaciens MT49 IAI46_23275 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 67 100
o Rahnella sp. WP5 EX31_RS15985 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 69 100
o Pectobacterium carotovorum WPP14 HER17_RS02215 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 66 100
o Vibrio cholerae E7946 ATCC 55056 CSW01_00225 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 59 99
o Shewanella loihica PV-4 Shew_3738 sun protein (RefSeq) strong 54 99
o Shewanella sp. ANA-3 Shewana3_0033 sun protein (RefSeq) strong 52 99
o Shewanella amazonensis SB2B Sama_0041 sun protein (RefSeq) strong 53 99
o Shewanella oneidensis MR-1 SO0030 sun sun protein (NCBI ptt file) sig. 52 99
o Pseudomonas stutzeri RCH2 Psest_0021 ribosomal RNA small subunit methyltransferase RsmB sig. 48 99
o Pseudomonas sp. BP01 JOY50_RS08250 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 50 96
o Pseudomonas putida KT2440 PP_0066 Ribosomal RNA small subunit methyltransferase B strong 50 96
o Alteromonas macleodii MIT1002 MIT1002_00018 Ribosomal RNA small subunit methyltransferase B cofit 47 100
o Pseudomonas fluorescens FW300-N2E3 AO353_10630 16S rRNA methyltransferase sig. 49 95
o Pseudomonas sp. SVBP6 COO64_RS02215 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 48 96
o Pseudomonas sp. S08-1 OH686_12525 16S rRNA (cytosine(967)-C(5))-methyltransferase cofit 49 96
o Pseudomonas syringae pv. syringae B728a Psyr_0017 16S rRNA m(5)C-967 methyltransferase insig. 49 95
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0017 16S rRNA m(5)C-967 methyltransferase insig. 49 95
o Pseudomonas fluorescens SBW25 PFLU_RS00080 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 49 95
o Pseudomonas fluorescens SBW25-INTG PFLU_RS00080 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB strong 49 95
o Pseudomonas aeruginosa PA14 IKLFDK_25475 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB strong 48 99
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1914 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) sig. 49 95
o Pseudomonas sp. DMC3 GFF590 Ribosomal RNA small subunit methyltransferase B cofit 49 95
o Pseudomonas lactucae CFBP13502 GEMAOFIL_00223 Ribosomal RNA small subunit methyltransferase B cofit 49 95
o Pseudomonas simiae WCS417 PS417_00085 16S rRNA methyltransferase insig. 48 95
o Pseudomonas sp. RS175 PFR28_04663 Ribosomal RNA small subunit methyltransferase B sig. 48 96
o Pseudomonas fluorescens GW456-L13 PfGW456L13_652 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) sig. 49 95
o Pseudomonas fluorescens FW300-N2C3 AO356_11275 16S rRNA methyltransferase strong 48 95
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4121 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) strong 48 95
o Marinobacter adhaerens HP15 HP15_3742 Fmu, rRNA SAM-dependent methyltransferase strong 45 98
o Kangiella aquimarina DSM 16071 B158DRAFT_0396 ribosomal RNA small subunit methyltransferase RsmB insig. 46 98
o Acinetobacter baumannii LAC-4 RR41_RS00120 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB sig. 42 99
o Lysobacter sp. OAE881 ABIE51_RS02255 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 42 98
o Dechlorosoma suillum PS Dsui_0812 ribosomal RNA small subunit methyltransferase RsmB strong 43 95
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS13890 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 41 99
o Rhodanobacter sp. FW510-T8 OKGIIK_13790 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 41 99
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4741.1 hypothetical protein insig. 43 96
o Acinetobacter radioresistens SK82 MPMX26_03021 Ribosomal RNA small subunit methyltransferase B insig. 40 99
o Ralstonia solanacearum PSI07 RPSI07_RS23575 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 42 96
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02237 16S rRNA (cytosine967-C5)-methyltransferase insig. 40 94
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS10125 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 42 99
o Burkholderia phytofirmans PsJN BPHYT_RS01475 16S rRNA methyltransferase insig. 40 94
o Rhodanobacter denitrificans MT42 LRK55_RS09765 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 42 99
o Paraburkholderia sabiae LMG 24235 QEN71_RS00175 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 39 97
o Paraburkholderia graminis OAS925 ABIE53_000392 16S rRNA (cytosine967-C5)-methyltransferase insig. 40 90
  Castellaniella sp019104865 MT123 ABCV34_RS14225 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 47 78
o Ralstonia solanacearum GMI1000 RS_RS00375 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 42 96
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1789 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) insig. 41 96
o Ralstonia sp. UNC404CL21Col ABZR87_RS04950 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 40 96
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS09790 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 41 96
o Ralstonia solanacearum UW163 UW163_RS03790 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 41 96
o Methylophilus sp. DMC18 GFF1499 Ribosomal RNA small subunit methyltransferase B insig. 44 73
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS02905 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 40 99
  Acidovorax sp. GW101-3H11 Ac3H11_4461 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) strong 46 73
o Herbaspirillum seropedicae SmR1 HSERO_RS00355 methyltransferase insig. 42 90
o Cupriavidus basilensis FW507-4G11 RR42_RS20450 16S rRNA methyltransferase strong 38 92
  Variovorax sp. SCN45 GFF5878 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) insig. 43 73
  Variovorax sp. OAS795 ABID97_RS05360 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB sig. 45 73
o Synechococcus elongatus PCC 7942 Synpcc7942_0962 sun sun protein sig. 37 99
o Synechocystis sp000284455 PCC 6803 SGL_RS03855 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 36 91
o Xanthobacter sp. DMC5 GFF3851 Ribosomal RNA small subunit methyltransferase B no data 35 99
o Azospirillum brasilense Sp245 AZOBR_RS00235 MFS transporter sig. 37 91
o Rhodopseudomonas palustris CGA009 TX73_000155 transcription antitermination factor NusB insig. 34 98
o Azospirillum sp. SherDot2 MPMX19_02327 Ribosomal RNA small subunit methyltransferase B insig. 36 91
o Caulobacter crescentus NA1000 CCNA_00101 16S rRNA m5C methyltransferase RsmB sig. 37 91
o Caulobacter crescentus NA1000 Δfur CCNA_00101 16S rRNA m5C methyltransferase RsmB cofit 37 91
o Bosea sp. OAE506 ABIE41_RS05105 RsmB/NOP family class I SAM-dependent RNA methyltransferase insig. 33 98
o Agrobacterium fabrum C58 Atu2825 Sun protein sig. 32 98
o Rhizobium sp. OAE497 ABIE40_RS19140 RsmB/NOP family class I SAM-dependent RNA methyltransferase insig. 31 98
o Magnetospirillum magneticum AMB-1 AMB_RS00745 MFS transporter insig. 34 99
o Rhodospirillum rubrum S1H Rru_A3660 tRNA and rRNA cytosine-C5-methylase (NCBI) insig. 35 97
o Sinorhizobium meliloti 1021 SMc04090 sun protein insig. 32 98
o Dinoroseobacter shibae DFL-12 Dshi_3033 Fmu (Sun) domain protein (RefSeq) sig. 36 93
o Phaeobacter inhibens DSM 17395 PGA1_c32880 putative ribosomal RNA small subunit methyltransferase B sig. 33 100
  Magnetospirillum magneticum AMB-1 AMB_RS19160 methyltransferase domain-containing protein cofit 32 97