Homologs of HSERO_RS07025 from Herbaspirillum seropedicae SmR1

ATP-dependent Clp protease ClpS
SEED: ATP-dependent Clp protease adaptor protein ClpS
KEGG: ATP-dependent Clp protease adaptor protein ClpS

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Herbaspirillum seropedicae SmR1 HSERO_RS07025 ATP-dependent Clp protease ClpS strong 100 100
o Ralstonia sp. UNC404CL21Col ABZR87_RS00440 ATP-dependent Clp protease adapter ClpS strong 78 99
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS04815 ATP-dependent Clp protease adaptor ClpS strong 78 99
o Ralstonia solanacearum PSI07 RPSI07_RS12570 ATP-dependent Clp protease adaptor ClpS strong 78 99
o Ralstonia solanacearum UW163 UW163_RS08855 ATP-dependent Clp protease adaptor ClpS insig. 78 99
o Ralstonia solanacearum GMI1000 RS_RS12375 ATP-dependent Clp protease adaptor ClpS strong 77 99
o Burkholderia phytofirmans PsJN BPHYT_RS15715 ATP-dependent Clp protease adapter protein ClpS sig. 77 100
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04083 ATP-dependent Clp protease adaptor protein ClpS sig. 76 100
o Paraburkholderia graminis OAS925 ABIE53_003307 ATP-dependent Clp protease adaptor protein ClpS strong 76 100
o Paraburkholderia sabiae LMG 24235 QEN71_RS03000 ATP-dependent Clp protease adapter ClpS strong 76 100
o Cupriavidus basilensis FW507-4G11 RR42_RS17110 ATP-dependent Clp protease adapter protein ClpS cofit 73 100
o Dechlorosoma suillum PS Dsui_0008 hypothetical protein cofit 65 99
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4520 ATP-dependent Clp protease adaptor protein ClpS cofit 67 91
o Variovorax sp. OAS795 ABID97_RS16915 ATP-dependent Clp protease adapter ClpS strong 65 97
o Acidovorax sp. GW101-3H11 Ac3H11_2457 ATP-dependent Clp protease adaptor protein ClpS insig. 70 88
  Variovorax sp. SCN45 GFF342 ATP-dependent Clp protease adaptor protein ClpS cofit 64 97
o Methylophilus sp. DMC18 GFF1739 ATP-dependent Clp protease adapter protein ClpS insig. 61 98
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2755.1 ATP-dependent Clp protease adaptor protein ClpS insig. 56 98
o Agrobacterium fabrum C58 Atu1363 ATP-dependent Clp protease adaptor protein ClpS no data 56 93
o Rhizobium sp. OAE497 ABIE40_RS08860 ATP-dependent Clp protease adapter ClpS sig. 54 93
o Azospirillum sp. SherDot2 MPMX19_00504 ATP-dependent Clp protease adapter protein ClpS insig. 54 98
o Caulobacter crescentus NA1000 CCNA_02552 ATP-dependent Clp protease adaptor protein ClpS strong 55 91
o Caulobacter crescentus NA1000 Δfur CCNA_02552 ATP-dependent Clp protease adaptor protein ClpS cofit 55 91
o Bosea sp. OAE506 ABIE41_RS18240 ATP-dependent Clp protease adapter ClpS sig. 57 94
  Castellaniella sp019104865 MT123 ABCV34_RS05310 ATP-dependent Clp protease adapter ClpS insig. 58 82
  Acinetobacter radioresistens SK82 MPMX26_01283 ATP-dependent Clp protease adapter protein ClpS strong 53 93
o Sinorhizobium meliloti 1021 SMc02110 ATP-dependent Clp protease adaptor protein ClpS no data 51 99
o Shewanella loihica PV-4 Shew_1565 ATP-dependent Clp protease adaptor protein ClpS (RefSeq) no data 56 88
o Pseudomonas fluorescens SBW25 PFLU_RS18555 ATP-dependent Clp protease adapter ClpS strong 50 96
o Pseudomonas fluorescens SBW25-INTG PFLU_RS18555 ATP-dependent Clp protease adapter ClpS strong 50 96
o Pseudomonas aeruginosa PA14 IKLFDK_13155 ATP-dependent Clp protease adapter ClpS sig. 53 95
o Magnetospirillum magneticum AMB-1 AMB_RS05700 ATP-dependent Clp protease adapter ClpS cofit 55 93
o Alteromonas macleodii MIT1002 MIT1002_01833 ATP-dependent Clp protease adapter protein ClpS insig. 56 88
  Xanthobacter sp. DMC5 GFF1011 ATP-dependent Clp protease adapter protein ClpS insig. 53 96
o Escherichia coli BL21 ECD_00886 regulatory protein for ClpA substrate specificity insig. 54 88
o Escherichia fergusonii Becca EFB2_03180 ATP-dependent Clp protease adapter protein ClpS insig. 54 88
o Escherichia coli ECOR27 NOLOHH_22185 clpS ATP-dependent Clp protease adapter ClpS insig. 54 88
o Escherichia coli ECOR38 HEPCGN_22895 clpS ATP-dependent Clp protease adapter ClpS cofit 54 88
o Escherichia coli ECRC100 OKFHMN_05790 clpS ATP-dependent Clp protease adapter ClpS cofit 54 88
o Escherichia coli ECRC101 MCAODC_25005 clpS ATP-dependent Clp protease adapter ClpS insig. 54 88
o Escherichia coli ECRC102 NIAGMN_03830 clpS ATP-dependent Clp protease adapter ClpS insig. 54 88
o Escherichia coli ECRC62 BNILDI_20440 clpS ATP-dependent Clp protease adapter ClpS cofit 54 88
o Escherichia coli ECRC98 JDDGAC_09425 clpS ATP-dependent Clp protease adapter ClpS insig. 54 88
o Escherichia coli ECRC99 KEDOAH_22120 clpS ATP-dependent Clp protease adapter ClpS no data 54 88
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02787 ATP-dependent Clp protease adapter protein ClpS insig. 54 88
o Escherichia coli Nissle 1917 ECOLIN_RS04690 ATP-dependent Clp protease adapter ClpS insig. 54 88
o Escherichia coli BW25113 b0881 clpS ATP-dependent Clp protease adaptor protein ClpS (NCBI) insig. 54 88
o Kangiella aquimarina DSM 16071 B158DRAFT_1504 Uncharacterized conserved protein strong 54 93
o Klebsiella michiganensis M5al BWI76_RS09610 ATP-dependent Clp protease adaptor ClpS strong 56 82
o Vibrio cholerae E7946 ATCC 55056 CSW01_05800 ATP-dependent Clp protease adaptor ClpS insig. 49 89
o Pseudomonas sp. SVBP6 COO64_RS24205 clpS ATP-dependent Clp protease adapter ClpS insig. 49 96
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4902 ATP-dependent Clp protease adaptor protein ClpS insig. 56 82
o Pectobacterium carotovorum WPP14 HER17_RS12405 ATP-dependent Clp protease adapter ClpS insig. 54 88
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS08395 ATP-dependent Clp protease adapter ClpS cofit 52 93
o Rhodanobacter sp. FW510-T8 OKGIIK_06885 clpS ATP-dependent Clp protease adapter ClpS sig. 49 97
o Enterobacter asburiae PDN3 EX28DRAFT_2051 Uncharacterized conserved protein cofit 52 88
o Enterobacter sp. TBS_079 MPMX20_01543 ATP-dependent Clp protease adapter protein ClpS insig. 52 88
o Lysobacter sp. OAE881 ABIE51_RS11495 ATP-dependent Clp protease adapter ClpS strong 49 98
o Shewanella sp. ANA-3 Shewana3_1752 clpS ATP-dependent Clp protease adaptor protein ClpS (RefSeq) no data 55 89
o Pseudomonas simiae WCS417 PS417_16515 Clp protease ClpS strong 50 94
o Shewanella oneidensis MR-1 SO2627 conserved hypothetical protein (NCBI ptt file) cofit 55 89
  Rhodospirillum rubrum S1H Rru_A2110 ATP-dependent Clp protease adaptor protein ClpS (NCBI) cofit 54 88
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS00425 ATP-dependent Clp protease adapter ClpS strong 48 96
o Rahnella sp. WP5 EX31_RS18565 ATP-dependent Clp protease adapter ClpS insig. 53 88
o Rhodanobacter denitrificans MT42 LRK55_RS00165 ATP-dependent Clp protease adapter ClpS strong 48 96
o Pseudomonas fluorescens FW300-N2E3 AO353_27680 ATP-dependent Clp protease adaptor ClpS strong 48 95
o Pseudomonas fluorescens FW300-N2C3 AO356_22145 ATP-dependent Clp protease adaptor ClpS strong 48 95
o Sphingomonas koreensis DSMZ 15582 Ga0059261_1285 Uncharacterized conserved protein strong 54 89
o Pseudomonas syringae pv. syringae B728a Psyr_3184 ATP-dependent Clp protease adaptor protein ClpS sig. 48 96
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3184 ATP-dependent Clp protease adaptor protein ClpS insig. 48 96
o Pantoea sp. MT58 IAI47_12950 ATP-dependent Clp protease adapter ClpS cofit 56 82
o Dickeya dadantii 3937 DDA3937_RS09555 ATP-dependent Clp protease adapter ClpS cofit 54 88
o Dickeya dianthicola 67-19 HGI48_RS09570 ATP-dependent Clp protease adapter ClpS insig. 54 88
o Dickeya dianthicola ME23 DZA65_RS09880 ATP-dependent Clp protease adapter ClpS insig. 54 88
o Serratia liquefaciens MT49 IAI46_08510 ATP-dependent Clp protease adapter ClpS insig. 54 88
o Pseudomonas sp. BP01 JOY50_RS06560 clpS ATP-dependent Clp protease adapter ClpS insig. 51 92
o Pseudomonas putida KT2440 PP_4009 ATP-dependent Clp protease adapter protein ClpS strong 51 92
o Rhodopseudomonas palustris CGA009 TX73_016275 ATP-dependent Clp protease adapter ClpS strong 54 89
o Shewanella amazonensis SB2B Sama_2057 clpS ATP-dependent Clp protease adaptor protein ClpS (RefSeq) strong 53 89
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS09725 ATP-dependent Clp protease adapter ClpS sig. 50 90
o Azospirillum brasilense Sp245 AZOBR_RS05180 Clp protease ClpS insig. 54 96
o Pseudomonas sp. S08-1 OH686_00230 ATP-dependent Clp protease adaptor protein ClpS cofit 50 97
o Erwinia amylovora T8 OLJFJH_16220 ATP-dependent Clp protease adapter ClpS sig. 53 88
o Pseudomonas stutzeri RCH2 Psest_2026 Uncharacterized conserved protein strong 50 94
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS02195 ATP-dependent Clp protease adapter ClpS strong 47 99
o Erwinia tracheiphila SCR3 LU632_RS09700 clpS ATP-dependent Clp protease adapter ClpS cofit 55 83
o Desulfovibrio vulgaris Hildenborough JW710 DVU1601 ATP-dependent Clp protease adaptor protein ClpS (TIGR) insig. 54 84
o Phaeobacter inhibens DSM 17395 PGA1_c30000 ATP-dependent Clp protease adaptor protein ClpS sig. 47 99
o Desulfovibrio vulgaris Miyazaki F DvMF_0459 ATP-dependent Clp protease adaptor protein ClpS (RefSeq) insig. 49 92
  Pseudomonas sp. DMC3 GFF1524 ATP-dependent Clp protease adapter protein ClpS insig. 53 76
  Pseudomonas sp. RS175 PFR28_02614 ATP-dependent Clp protease adapter protein ClpS strong 53 76
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2645 ATP-dependent Clp protease adaptor protein ClpS sig. 53 76
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4054 ATP-dependent Clp protease adaptor protein ClpS strong 53 76
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_291 ATP-dependent Clp protease adaptor protein ClpS strong 53 76
  Marinobacter adhaerens HP15 HP15_2081 ATP-dependent Clp protease adaptor protein ClpS sig. 52 74
  Rhizobium sp. OAE497 ABIE40_RS13095 ATP-dependent Clp protease adapter ClpS insig. 40 85
  Rhodopseudomonas palustris CGA009 TX73_006180 ATP-dependent Clp protease adapter ClpS insig. 40 81
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS09035 ATP-dependent Clp protease adaptor ClpS sig. 33 92
o Phocaeicola dorei CL03T12C01 ABI39_RS03340 ATP-dependent Clp protease adaptor ClpS insig. 33 92
  Agrobacterium fabrum C58 Atu2232 ATP-dependent Clp protease adaptor protein ClpS insig. 40 80