Homologs of GFF83 from Sphingobium sp. HT1-2

Cytochrome c heme lyase subunit CcmF
SEED: Cytochrome c heme lyase subunit CcmF
KEGG: cytochrome c-type biogenesis protein CcmF

121 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sphingobium sp. HT1-2 GFF83 Cytochrome c heme lyase subunit CcmF no data 100 100
o Sphingomonas koreensis DSMZ 15582 Ga0059261_0172 Cytochrome c biogenesis factor strong 67 94
o Magnetospirillum magneticum AMB-1 AMB_RS21250 heme lyase CcmF/NrfE family subunit no data 47 98
o Xanthobacter sp. DMC5 GFF1779 Cytochrome c-type biogenesis protein CcmF no data 50 98
o Rhodopseudomonas palustris CGA009 TX73_009900 heme lyase CcmF/NrfE family subunit no data 48 98
o Dinoroseobacter shibae DFL-12 Dshi_3411 cytochrome c-type biogenesis protein CcmF (RefSeq) sig. 46 91
  Dinoroseobacter shibae DFL-12 Dshi_3775 cytochrome c-type biogenesis protein CcmF (RefSeq) no data 46 93
  Dinoroseobacter shibae DFL-12 Dshi_4051 cytochrome c-type biogenesis protein CcmF (RefSeq) no data 46 93
o Azospirillum brasilense Sp245 AZOBR_RS00740 heme lyase subunit CcmF no data 47 98
o Rhizobium sp. OAE497 ABIE40_RS05685 heme lyase CcmF/NrfE family subunit strong 47 90
o Azospirillum sp. SherDot2 MPMX19_02533 Cytochrome c-type biogenesis protein CcmF no data 47 98
o Phaeobacter inhibens DSM 17395 PGA1_c17010 cytochrome c-type biogenesis protein CcmF no data 47 95
o Rhodospirillum rubrum S1H Rru_A0035 Cytochrome c-type biogenesis protein CcmF (NCBI) no data 46 98
o Sinorhizobium meliloti 1021 SMc02363 cytochrome C-type biogenesis transmembrane protein sig. 45 100
o Dechlorosoma suillum PS Dsui_1172 c-type cytochrome biogenesis protein CcmF no data 45 98
o Vibrio cholerae E7946 ATCC 55056 CSW01_10265 c-type cytochrome biogenesis protein CcmF strong 43 98
o Agrobacterium fabrum C58 Atu0975 cytochrome c-type synthesis protein no data 46 91
o Bosea sp. OAE506 ABIE41_RS21455 heme lyase CcmF/NrfE family subunit no data 45 98
o Pantoea sp. MT58 IAI47_06090 heme lyase CcmF/NrfE family subunit cofit 44 93
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS00045 heme lyase CcmF/NrfE family subunit insig. 44 93
o Rahnella sp. WP5 EX31_RS19745 heme lyase CcmF/NrfE family subunit insig. 43 98
o Pseudomonas segetis P6 ACVTMO_RS15395 heme lyase CcmF/NrfE family subunit no data 44 98
o Escherichia coli ECOR38 HEPCGN_22570 ccmF cytochrome c-type biogenesis heme lyase CcmF insig. 43 98
o Klebsiella pneumoniae MKP103 KDGMDA_23845 cytochrome c maturation protein CcmE insig. 44 94
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01515 Cytochrome c-type biogenesis protein CcmF sig. 44 98
o Serratia liquefaciens MT49 IAI46_18085 heme lyase CcmF/NrfE family subunit insig. 42 94
o Klebsiella pneumoniae MRSN742743 KFA93_RS15200 heme lyase CcmF/NrfE family subunit insig. 44 94
o Escherichia fergusonii Becca EFB2_01660 Cytochrome c-type biogenesis protein CcmF insig. 44 98
o Escherichia coli Nissle 1917 ECOLIN_RS12835 cytochrome c-type biogenesis heme lyase CcmF no data 44 98
o Escherichia coli BL21 ECD_02123 heme lyase, CcmF subunit sig. 43 98
o Escherichia coli ECRC100 OKFHMN_23305 ccmF cytochrome c-type biogenesis heme lyase CcmF insig. 43 98
o Escherichia coli ECRC101 MCAODC_14355 ccmF cytochrome c-type biogenesis heme lyase CcmF insig. 43 98
o Escherichia coli ECRC102 NIAGMN_21070 ccmF cytochrome c-type biogenesis heme lyase CcmF insig. 43 98
o Escherichia coli ECRC62 BNILDI_13800 ccmF cytochrome c-type biogenesis heme lyase CcmF cofit 43 98
o Escherichia coli ECRC98 JDDGAC_27265 ccmF cytochrome c-type biogenesis heme lyase CcmF insig. 43 98
o Escherichia coli ECRC99 KEDOAH_04880 ccmF cytochrome c-type biogenesis heme lyase CcmF no data 43 98
o Escherichia coli BW25113 b2196 ccmF heme lyase, CcmF subunit (NCBI) insig. 43 98
o Escherichia coli ECOR27 NOLOHH_14880 ccmF cytochrome c-type biogenesis heme lyase CcmF insig. 44 98
o Shewanella amazonensis SB2B Sama_0248 cytochrome c-type biogenesis protein CcmF (RefSeq) strong 44 98
o Erwinia amylovora T8 OLJFJH_11100 heme lyase NrfEFG subunit NrfE insig. 43 93
o Pectobacterium carotovorum WPP14 HER17_RS09055 heme lyase CcmF/NrfE family subunit insig. 43 100
o Shewanella loihica PV-4 Shew_0193 cytochrome c-type biogenesis protein CcmF (RefSeq) strong 43 98
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS06445 heme lyase CcmF/NrfE family subunit no data 44 93
o Shewanella sp. ANA-3 Shewana3_0234 cytochrome c-type biogenesis protein CcmF (RefSeq) strong 42 98
o Shewanella oneidensis MR-1 SO0266 ccmF-1 cytochrome c-type biogenesis protein CcmF (NCBI ptt file) strong 42 98
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4311 Cytochrome c heme lyase subunit CcmF no data 43 95
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS10825 heme lyase CcmF/NrfE family subunit no data 46 88
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4877 Cytochrome c heme lyase subunit CcmF no data 44 95
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS16065 heme lyase CcmF/NrfE family subunit no data 44 90
o Rhodanobacter sp. FW510-T8 OKGIIK_08585 ccmF c-type cytochrome biogenesis protein CcmF no data 44 90
o Rhodanobacter denitrificans MT42 LRK55_RS15815 heme lyase CcmF/NrfE family subunit insig. 44 90
o Kangiella aquimarina DSM 16071 B158DRAFT_1328 c-type cytochrome biogenesis protein CcmF strong 40 92
o Pseudomonas sp. RS175 PFR28_00870 Cytochrome c-type biogenesis protein CcmF no data 45 95
o Lysobacter sp. OAE881 ABIE51_RS08700 heme lyase CcmF/NrfE family subunit strong 44 98
o Pseudomonas fluorescens SBW25 PFLU_RS08670 heme lyase CcmF/NrfE family subunit cofit 44 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS08670 heme lyase CcmF/NrfE family subunit strong 44 100
o Pseudomonas fluorescens FW300-N2E3 AO353_18875 cytochrome C biogenesis protein CcmF no data 44 100
o Pseudomonas orientalis W4I3 QF045_RS11430 heme lyase CcmF/NrfE family subunit no data 44 100
o Pseudomonas sp. SVBP6 COO64_RS25715 heme lyase CcmF/NrfE family subunit no data 44 95
o Caulobacter crescentus NA1000 CCNA_02848 heme chaperone-apocytochrome heme-lyase strong 42 97
o Caulobacter crescentus NA1000 Δfur CCNA_02848 heme chaperone-apocytochrome heme-lyase cofit 42 97
o Pseudomonas simiae WCS417 PS417_08715 cytochrome C biogenesis protein CcmF no data 43 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_01875 Cytochrome c-type biogenesis protein CcmF no data 44 100
o Pseudomonas sp. DMC3 GFF2490 Cytochrome c-type biogenesis protein CcmF no data 44 95
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3190.1 Cytochrome c heme lyase subunit CcmF insig. 43 93
o Alteromonas macleodii MIT1002 MIT1002_00965 Cytochrome c-type biogenesis protein CcmF no data 38 98
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3644 Cytochrome c heme lyase subunit CcmF no data 44 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2555 Cytochrome c heme lyase subunit CcmF no data 44 98
o Pseudomonas fluorescens FW300-N2C3 AO356_03635 cytochrome C biogenesis protein CcmF no data 44 100
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2342.1 Cytochrome c heme lyase subunit CcmF no data 46 94
o Pseudomonas sp. S08-1 OH686_02635 cytochrome c-type biogenesis protein CcmF no data 45 95
o Pseudomonas syringae pv. syringae B728a Psyr_3388 Cytochrome c-type biogenesis protein CcmF no data 45 95
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3388 Cytochrome c-type biogenesis protein CcmF no data 45 95
o Marinobacter adhaerens HP15 HP15_2281 cytochrome c assembly protein no data 42 93
o Pseudomonas stutzeri RCH2 Psest_1759 c-type cytochrome biogenesis protein CcmF no data 44 100
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS12730 heme lyase CcmF/NrfE family subunit no data 44 90
o Pseudomonas sp. BP01 JOY50_RS00480 heme lyase CcmF/NrfE family subunit no data 43 95
o Pseudomonas putida KT2440 PP_4322 holocytochrome c synthetase no data 42 95
o Pseudomonas aeruginosa MRSN321 DY961_RS05510 heme lyase CcmF/NrfE family subunit no data 44 95
o Pseudomonas aeruginosa PA14 IKLFDK_07040 Cytochrome c-type biogenesis protein CcmF no data 44 95
o Pseudomonas aeruginosa PUPa3 DQ20_RS47280 heme lyase CcmF/NrfE family subunit no data 44 95
  Shewanella loihica PV-4 Shew_0347 cytochrome c assembly protein (RefSeq) insig. 39 91
  Shewanella oneidensis MR-1 SO0478 ccmF-2 cytochrome c-type biogenesis protein CcmF (NCBI ptt file) insig. 37 89
  Shewanella sp. ANA-3 Shewana3_0488 cytochrome c-type biogenesis protein CcmF (RefSeq) insig. 38 89
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03966 Cytochrome c-type biogenesis protein CcmF insig. 38 89
  Escherichia coli BL21 ECD_03946 heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfE insig. 38 89
  Escherichia coli ECOR27 NOLOHH_05050 nrfF heme lyase NrfEFG subunit NrfF insig. 38 89
  Escherichia coli Nissle 1917 ECOLIN_RS23575 heme lyase CcmF/NrfE family subunit insig. 39 89
  Escherichia fergusonii Becca EFB2_04515 Cytochrome c-type biogenesis protein CcmF insig. 38 89
  Escherichia coli ECRC62 BNILDI_06475 ccmF Cytochrome c biogenesis protein CcmF insig. 38 88
  Escherichia coli BW25113 b4074 nrfE heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfE (NCBI) insig. 38 88
  Escherichia coli ECRC100 OKFHMN_12800 nrfF heme lyase NrfEFG subunit NrfF cofit 38 88
  Escherichia coli ECRC101 MCAODC_03310 nrfF heme lyase NrfEFG subunit NrfF insig. 38 88
  Escherichia coli ECRC102 NIAGMN_10645 nrfF heme lyase NrfEFG subunit NrfF insig. 38 88
  Escherichia coli ECRC98 JDDGAC_16435 nrfF heme lyase NrfEFG subunit NrfF insig. 38 88
  Escherichia coli ECRC99 KEDOAH_15350 nrfF heme lyase NrfEFG subunit NrfF no data 38 88
  Escherichia coli ECOR38 HEPCGN_11425 ccmF Cytochrome c biogenesis protein CcmF insig. 38 89
  Pectobacterium carotovorum WPP14 HER17_RS09015 heme lyase CcmF/NrfE family subunit cofit 37 92
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1457 Cytochrome c heme lyase subunit CcmF insig. 37 89
  Desulfovibrio vulgaris Hildenborough JW710 DVU1050 ccmF cytochrome c-type biogenesis protein CcmF (TIGR) no data 31 91
  Desulfovibrio vulgaris Miyazaki F DvMF_3132 cytochrome c assembly protein (RefSeq) no data 31 90
  Desulfovibrio vulgaris Miyazaki F DvMF_0826 cytochrome c assembly protein (RefSeq) insig. 31 89
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0800 Cytochrome c biogenesis factor no data 27 70
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS03500 cytochrome C biogenesis protein no data 28 72
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS07885 cytochrome c biogenesis protein CcsA no data 27 66
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_18700 cytochrome C biogenesis protein no data 29 67
  Herbaspirillum seropedicae SmR1 HSERO_RS00775 cytochrome C biogenesis protein no data 27 23
  Methylophilus sp. DMC18 GFF1549 Cytochrome c biogenesis protein CcsA no data 28 22
  Cupriavidus basilensis FW507-4G11 RR42_RS19080 cytochrome C biogenesis protein no data 26 23
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05603 cytochrome c-type biogenesis protein CcsB no data 27 22
  Paraburkholderia graminis OAS925 ABIE53_003752 cytochrome c-type biogenesis protein CcsB insig. 27 22
  Paraburkholderia sabiae LMG 24235 QEN71_RS28095 c-type cytochrome biogenesis protein CcsB strong 25 29
  Burkholderia phytofirmans PsJN BPHYT_RS17945 cytochrome C biogenesis protein cofit 28 22
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS07020 c-type cytochrome biogenesis protein CcsB strong 24 23
  Ralstonia solanacearum GMI1000 RS_RS14960 c-type cytochrome biogenesis protein CcsB no data 24 23
  Ralstonia solanacearum PSI07 RPSI07_RS10220 c-type cytochrome biogenesis protein CcsB sig. 24 23
  Ralstonia solanacearum UW163 UW163_RS06595 c-type cytochrome biogenesis protein CcsB insig. 24 23
  Ralstonia sp. UNC404CL21Col ABZR87_RS02670 c-type cytochrome biogenesis protein CcsB no data 27 23
  Mycobacterium tuberculosis H37Rv Rv0529 Possible cytochrome C-type biogenesis protein CcsA no data 32 14
  Synechococcus elongatus PCC 7942 Synpcc7942_0511 ccsA ABC-type transport system involved in cytochrome c biogenesis permease component-like no data 30 17
  Synechocystis sp000284455 PCC 6803 SGL_RS04050 c-type cytochrome biogenesis protein CcsB no data 47 7