Homologs of PS417_03010 from Pseudomonas simiae WCS417

XRE family transcriptional regulator
SEED: DNA-damage-inducible protein F
KEGG: multidrug resistance protein, MATE family

185 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas simiae WCS417 PS417_03010 XRE family transcriptional regulator insig. 100 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_00834 DNA damage-inducible protein F cofit 95 100
o Pseudomonas orientalis W4I3 QF045_RS06045 MATE family efflux transporter cofit 95 100
o Pseudomonas fluorescens SBW25 PFLU_RS03090 MATE family efflux transporter insig. 96 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS03090 MATE family efflux transporter insig. 96 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1292 DNA-damage-inducible protein F insig. 87 99
o Pseudomonas fluorescens GW456-L13 PfGW456L13_40 DNA-damage-inducible protein F insig. 87 99
o Pseudomonas sp. DMC3 GFF3325 DNA damage-inducible protein F cofit 85 99
o Pseudomonas fluorescens FW300-N2E3 AO353_13735 MATE family efflux transporter insig. 86 99
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3500 DNA-damage-inducible protein F insig. 86 100
o Pseudomonas fluorescens FW300-N2C3 AO356_08140 MATE family efflux transporter insig. 85 100
o Pseudomonas sp. RS175 PFR28_05231 DNA damage-inducible protein F insig. 84 100
o Pseudomonas putida KT2440 PP_0569 MATE efflux family protein insig. 79 99
o Pseudomonas syringae pv. syringae B728a Psyr_4384 Multi antimicrobial extrusion protein MatE insig. 78 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4384 Multi antimicrobial extrusion protein MatE insig. 78 99
o Pseudomonas sp. SVBP6 COO64_RS18420 MATE family efflux transporter insig. 81 98
o Pseudomonas sp. BP01 JOY50_RS23180 MATE family efflux transporter insig. 78 99
o Pseudomonas stutzeri RCH2 Psest_3364 putative efflux protein, MATE family insig. 76 99
o Pseudomonas aeruginosa PA14 IKLFDK_29470 DNA-damage-inducible protein F sig. 72 100
o Pseudomonas segetis P6 ACVTMO_RS20250 MATE family efflux transporter insig. 72 94
o Pseudomonas aeruginosa PUPa3 DQ20_RS52175 MATE family efflux transporter insig. 73 100
o Pseudomonas aeruginosa MRSN321 DY961_RS09875 MATE family efflux transporter sig. 73 100
o Pseudomonas sp. S08-1 OH686_07530 MATE efflux family protein insig. 70 100
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS00490 MATE family efflux transporter insig. 62 99
o Kangiella aquimarina DSM 16071 B158DRAFT_0674 putative efflux protein, MATE family insig. 46 96
o Vibrio cholerae E7946 ATCC 55056 CSW01_00480 MATE family efflux transporter insig. 44 99
o Shewanella amazonensis SB2B Sama_3501 DNA-damage-inducible protein F (RefSeq) sig. 45 93
o Marinobacter adhaerens HP15 HP15_3770 MATE efflux family protein insig. 43 97
o Shewanella oneidensis MR-1 SO4617 dinF DNA-damage-inducible protein F (NCBI ptt file) sig. 43 95
o Serratia liquefaciens MT49 IAI46_23000 MATE family efflux transporter DinF insig. 43 97
o Erwinia amylovora T8 OLJFJH_03575 MATE family efflux transporter DinF insig. 44 97
o Rahnella sp. WP5 EX31_RS11850 MATE family efflux transporter DinF insig. 42 97
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1413 DNA-damage-inducible protein F insig. 45 97
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS21210 MATE family efflux transporter DinF cofit 43 97
o Pantoea sp. MT58 IAI47_17885 MATE family efflux transporter DinF insig. 43 97
o Klebsiella pneumoniae MRSN742743 KFA93_RS21770 dinF;go_component=membrane|0016020||IEA;go_function=antiporter MATE family efflux transporter DinF insig. 45 96
o Klebsiella pneumoniae MKP103 KDGMDA_10335 MATE family efflux transporter DinF insig. 45 96
o Enterobacter sp. TBS_079 MPMX20_00260 DNA damage-inducible protein F insig. 44 97
o Shewanella loihica PV-4 Shew_0107 MATE efflux family protein (RefSeq) sig. 43 96
o Paraburkholderia sabiae LMG 24235 QEN71_RS04895 MATE family efflux transporter insig. 41 96
o Escherichia coli ECRC62 BNILDI_06305 dinF MATE family efflux transporter DinF insig. 45 97
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03999 DNA damage-inducible protein F insig. 45 97
o Escherichia coli ECOR38 HEPCGN_11580 dinF MATE family efflux transporter DinF insig. 45 97
o Bacteroides ovatus ATCC 8483 BACOVA_03104 MATE efflux family protein insig. 35 95
o Escherichia coli BL21 ECD_03916 oxidative stress resistance protein; putative MATE family efflux pump; UV and mitomycin C inducible protein insig. 45 97
o Escherichia coli ECOR27 NOLOHH_05215 dinF MATE family efflux transporter DinF insig. 45 97
o Cupriavidus basilensis FW507-4G11 RR42_RS09395 multidrug transporter MatE insig. 43 93
o Shewanella sp. ANA-3 Shewana3_4001 MATE efflux family protein (RefSeq) sig. 43 95
o Escherichia coli BW25113 b4044 dinF DNA-damage-inducible SOS response protein (NCBI) insig. 44 97
o Enterobacter asburiae PDN3 EX28DRAFT_4268 putative efflux protein, MATE family insig. 44 94
o Ralstonia sp. UNC404CL21Col ABZR87_RS22695 MATE family efflux transporter insig. 41 92
o Escherichia coli ECRC100 OKFHMN_13060 dinF MATE family efflux transporter DinF insig. 44 97
o Escherichia coli ECRC101 MCAODC_03560 dinF MATE family efflux transporter DinF insig. 44 97
o Escherichia coli ECRC102 NIAGMN_10810 dinF MATE family efflux transporter DinF insig. 44 97
o Escherichia coli ECRC98 JDDGAC_16685 dinF MATE family efflux transporter DinF insig. 44 97
o Escherichia coli ECRC99 KEDOAH_15100 dinF MATE family efflux transporter DinF no data 44 97
o Escherichia fergusonii Becca EFB2_04559 DNA damage-inducible protein F insig. 45 97
o Escherichia coli Nissle 1917 ECOLIN_RS23340 MATE family efflux transporter DinF insig. 45 97
o Klebsiella michiganensis M5al BWI76_RS01880 MATE family efflux transporter insig. 44 96
o Dinoroseobacter shibae DFL-12 Dshi_0845 MATE efflux family protein (RefSeq) strong 41 94
o Xanthobacter sp. DMC5 GFF148 DNA damage-inducible protein F insig. 40 93
o Bacteroides thetaiotaomicron VPI-5482 BT2241 DNA-damage-inducible protein F (NCBI ptt file) sig. 34 95
o Alteromonas macleodii MIT1002 MIT1002_04023 DNA-damage-inducible protein F insig. 39 98
  Paraburkholderia graminis OAS925 ABIE53_002980 MATE family multidrug resistance protein insig. 43 93
o Phaeobacter inhibens DSM 17395 PGA1_c12130 DNA-damage-inducible protein F sig. 40 94
o Burkholderia phytofirmans PsJN BPHYT_RS14080 multidrug transporter MatE insig. 43 93
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS13880 MATE family efflux transporter sig. 33 93
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04426 multidrug resistance protein, MATE family insig. 42 96
o Phocaeicola dorei CL03T12C01 ABI39_RS09485 MATE family efflux transporter insig. 33 93
o Bacteroides stercoris CC31F HMPREF1181_RS09420 MATE family efflux transporter insig. 34 93
o Ralstonia solanacearum PSI07 RPSI07_RS01180 MATE family efflux transporter insig. 41 94
o Ralstonia solanacearum GMI1000 RS_RS18520 MATE family efflux transporter insig. 41 94
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS15090 MATE family efflux transporter insig. 34 94
o Rhodopseudomonas palustris CGA009 TX73_004125 MATE family efflux transporter insig. 40 91
o Sinorhizobium meliloti 1021 SMc02244 transmembrane protein insig. 37 90
  Rhizobium sp. OAE497 ABIE40_RS02425 MATE family efflux transporter insig. 36 94
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1394 putative efflux protein, MATE family insig. 36 93
  Agrobacterium fabrum C58 Atu5428 DNA-damage-inducible protein F insig. 36 97
  Synechocystis sp000284455 PCC 6803 SGL_RS06455 guanitoxin biosynthesis MATE family efflux transporter GntT strong 27 97
  Cellulophaga baltica 18 M666_RS04275 MATE family efflux transporter insig. 24 94
  Bifidobacterium breve UCC2003 BBR_RS11530 MATE family efflux transporter insig. 28 88
  Phocaeicola dorei CL03T12C01 ABI39_RS03360 MATE family efflux transporter insig. 30 43
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS07410 MATE family efflux transporter insig. 29 46
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS09055 MATE family efflux transporter insig. 30 43
  Pseudomonas sp. DMC3 GFF1263 Multidrug resistance protein NorM cofit 27 97
  Bacteroides thetaiotaomicron VPI-5482 BT0588 BexA: efflux pump for ciprofloxacin, lomefloxacin, and paraquat (from data) strong 21 78
  Bacteroides ovatus ATCC 8483 BACOVA_03694 MATE efflux family protein insig. 20 77
  Pseudomonas segetis P6 ACVTMO_RS11575 MATE family efflux transporter insig. 26 95
  Phocaeicola dorei CL03T12C01 ABI39_RS12160 MATE family efflux transporter insig. 26 72
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3892 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps insig. 26 97
  Bacteroides thetaiotaomicron VPI-5482 BT1900 BexA, putative cation effux pump (NCBI ptt file) strong 26 45
  Pseudomonas sp. RS175 PFR28_01102 Multidrug resistance protein NorM sig. 26 96
  Cupriavidus basilensis FW507-4G11 RR42_RS13335 multidrug transporter MatE insig. 28 67
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS16270 MATE family efflux transporter sig. 26 72
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS12525 MATE family efflux transporter cofit 27 95
  Pseudomonas fluorescens FW300-N2C3 AO356_02370 MATE family efflux transporter sig. 26 94
  Pseudomonas sp. SVBP6 COO64_RS05190 MATE family efflux transporter insig. 27 98
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2298 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps insig. 27 92
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS14690 MATE family efflux transporter insig. 22 67
  Bacteroides stercoris CC31F HMPREF1181_RS15150 MATE family efflux transporter strong 21 78
  Pseudomonas sp. S08-1 OH686_02075 Na(+)/drug antiporter, MATE family of MDR efflux pumps insig. 28 93
  Pseudomonas aeruginosa MRSN321 DY961_RS19155 pmpM;inference=COORDINATES proton-coupled multidrug efflux MATE transporter PmpM sig. 26 93
  Pseudomonas aeruginosa PA14 IKLFDK_06480 proton-coupled multidrug efflux MATE transporter PmpM insig. 26 93
  Pseudomonas aeruginosa PUPa3 DQ20_RS53280 pmpM;inference=COORDINATES proton-coupled multidrug efflux MATE transporter PmpM insig. 26 93
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS03980 MATE family efflux transporter insig. 25 93
  Phocaeicola dorei CL03T12C01 ABI39_RS18710 MATE family efflux transporter insig. 27 46
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS16405 MATE family efflux transporter strong 21 90
  Bacteroides stercoris CC31F HMPREF1181_RS16215 MATE family efflux transporter insig. 23 70
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS09785 MATE family efflux transporter insig. 25 97
  Pseudomonas simiae WCS417 PS417_07530 multidrug transporter sig. 25 92
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS05175 MATE family efflux transporter insig. 27 46
  Pseudomonas fluorescens SBW25 PFLU_RS07610 MATE family efflux transporter insig. 25 95
  Pseudomonas fluorescens SBW25-INTG PFLU_RS07610 MATE family efflux transporter insig. 25 95
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01638 Multidrug resistance protein NorM cofit 24 93
  Rhodanobacter sp. FW510-T8 OKGIIK_12790 norM MATE family efflux transporter insig. 25 93
  Lysobacter sp. OAE881 ABIE51_RS07765 MATE family efflux transporter insig. 28 44
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4049 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps insig. 24 92
  Bacteroides ovatus ATCC 8483 BACOVA_01567 MATE efflux family protein insig. 25 43
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS07670 MATE family efflux transporter strong 26 42
  Vibrio cholerae E7946 ATCC 55056 CSW01_03425 MATE family efflux transporter insig. 24 97
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS09325 MATE family efflux transporter insig. 22 91
  Rhodanobacter denitrificans MT42 LRK55_RS10790 MATE family efflux transporter insig. 25 95
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS11085 MATE family efflux transporter insig. 25 95
  Phocaeicola dorei CL03T12C01 ABI39_RS19295 MATE family efflux transporter insig. 24 94
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_08450 hypothetical protein cofit 51 14
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_21515 MATE family efflux transporter insig. 25 72
  Bacteroides ovatus ATCC 8483 BACOVA_04342 MATE efflux family protein sig. 21 67
  Pseudomonas fluorescens FW300-N2E3 AO353_00550 MATE family efflux transporter sig. 24 97
  Pseudomonas stutzeri RCH2 Psest_2549 putative efflux protein, MATE family insig. 27 68
  Erwinia tracheiphila SCR3 LU632_RS22310 hypothetical protein insig. 41 17
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS08960 MATE family efflux transporter strong 23 80
  Shewanella oneidensis MR-1 SO2295 MATE efflux family protein (NCBI ptt file) sig. 26 60
  Pseudomonas segetis P6 ACVTMO_RS07135 MATE family efflux transporter insig. 26 66
  Bacteroides thetaiotaomicron VPI-5482 BT0696 putative membrane protein (NCBI ptt file) strong 20 70
  Bacteroides stercoris CC31F HMPREF1181_RS16845 MATE family efflux transporter insig. 25 50
  Bacteroides stercoris CC31F HMPREF1181_RS13950 MATE family efflux transporter insig. 26 43
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS08030 MATE family efflux transporter insig. 24 50
  Phocaeicola dorei CL03T12C01 ABI39_RS10860 MATE family efflux transporter insig. 25 43
  Bacteroides ovatus ATCC 8483 BACOVA_03034 MATE efflux family protein insig. 23 71
  Bacteroides thetaiotaomicron VPI-5482 BT2377 cation efflux pump (NCBI ptt file) insig. 23 79
  Dinoroseobacter shibae DFL-12 Dshi_0755 MATE efflux family protein (RefSeq) insig. 25 77
  Bacteroides thetaiotaomicron VPI-5482 BT4499 conserved hypothetical protein, putative membrane protein (NCBI ptt file) insig. 23 45
  Shewanella sp. ANA-3 Shewana3_2039 MATE efflux family protein (RefSeq) insig. 27 60
  Pseudomonas orientalis W4I3 QF045_RS10175 MATE family efflux transporter insig. 24 95
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS17800 MATE family efflux transporter sig. 22 73
  Rhizobium sp. OAE497 ABIE40_RS12780 MATE family efflux transporter insig. 27 97
  Bacteroides ovatus ATCC 8483 BACOVA_02399 MATE efflux family protein sig. 19 70
  Acinetobacter baumannii LAC-4 RR41_RS00315 MATE family efflux transporter insig. 28 43
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_06370 MATE family efflux transporter sig. 24 95
  Phocaeicola dorei CL03T12C01 ABI39_RS14015 MATE family efflux transporter insig. 22 73
  Bacteroides ovatus ATCC 8483 BACOVA_05304 MATE efflux family protein insig. 26 39
  Desulfovibrio vulgaris Hildenborough JW710 DVU1217 MATE efflux family protein (TIGR) cofit 24 97
  Rahnella sp. WP5 EX31_RS13855 MATE family efflux transporter insig. 23 93
  Sphingobium sp. HT1-2 GFF4533 Na+-driven multidrug efflux pump cofit 28 41
  Pseudomonas segetis P6 ACVTMO_RS22590 NorM family multidrug efflux MATE transporter insig. 27 87
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS22630 MATE family efflux transporter insig. 24 41
  Ralstonia solanacearum UW163 UW163_RS23180 MATE family efflux transporter insig. 24 41
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2785 putative efflux protein, MATE family strong 22 98
  Rhizobium sp. OAE497 ABIE40_RS05955 MATE family efflux transporter insig. 30 41
  Bacteroides thetaiotaomicron VPI-5482 BT1599 BexA, membrane protein (NCBI ptt file) sig. 22 38
  Bacteroides ovatus ATCC 8483 BACOVA_03236 MATE efflux family protein insig. 26 41
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4760.1 Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM insig. 26 68
  Vibrio cholerae E7946 ATCC 55056 CSW01_07735 multidrug resistance protein NorM cofit 24 68
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0975 putative efflux protein, MATE family insig. 24 77
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS15065 MATE family efflux transporter sig. 21 76
  Dickeya dianthicola 67-19 HGI48_RS12700 MATE family efflux transporter insig. 26 51
  Dickeya dianthicola ME23 DZA65_RS13155 MATE family efflux transporter insig. 26 51
  Acinetobacter baumannii LAC-4 RR41_RS17025 multidrug efflux MATE transporter AbeM insig. 26 44
  Bacteroides stercoris CC31F HMPREF1181_RS12410 MATE family efflux transporter insig. 23 68
  Shewanella amazonensis SB2B Sama_1761 MATE efflux family protein (RefSeq) sig. 27 39
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3764.1 Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog insig. 26 49
  Ralstonia sp. UNC404CL21Col ABZR87_RS18915 MATE family efflux transporter insig. 23 96
  Pseudomonas aeruginosa PA14 IKLFDK_26980 NorM family multidrug efflux MATE transporter insig. 26 56
  Serratia liquefaciens MT49 IAI46_11210 MATE family efflux transporter cofit 24 93
  Pectobacterium carotovorum WPP14 HER17_RS09220 MATE family efflux transporter cofit 26 52
  Ralstonia solanacearum PSI07 RPSI07_RS05585 MATE family efflux transporter insig. 26 43
  Synechococcus elongatus PCC 7942 Synpcc7942_1699 MATE efflux family protein insig. 24 72
  Pseudomonas aeruginosa MRSN321 DY961_RS12360 NorM family multidrug efflux MATE transporter insig. 26 56
  Pseudomonas aeruginosa PUPa3 DQ20_RS49770 NorM family multidrug efflux MATE transporter sig. 26 56
  Acinetobacter radioresistens SK82 MPMX26_00306 Multidrug resistance protein NorM insig. 24 67
  Marinobacter adhaerens HP15 HP15_3913 multidrug resistance protein NorM strong 25 78
  Fusobacterium nucleatum SB010 HUW76_10185 MATE family efflux transporter strong 19 88
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS14750 MATE family efflux transporter strong 25 43
  Bacteroides stercoris CC31F HMPREF1181_RS00200 MATE family efflux transporter cofit 21 69
  Erwinia amylovora T8 OLJFJH_14535 Multidrug resistance protein MdtK insig. 24 96