| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Sphingobium sp. HT1-2 | GFF5216 | | Sodium-transporting ATPase subunit D | cofit | 100 | 100 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS27615 | | F0F1 ATP synthase subunit beta | insig. | 71 | 96 |
| o | Azospirillum sp. SherDot2 | MPMX19_05039 | | ATP synthase subunit beta | insig. | 67 | 98 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS09705 | | F0F1 ATP synthase subunit beta | no data | 55 | 99 |
| | Fusobacterium nucleatum SB010 | HUW76_03090 | | F0F1 ATP synthase subunit beta | strong | 53 | 98 |
| o | Marinobacter adhaerens HP15 | HP15_3989 | | F0F1 ATP synthase subunit beta | insig. | 56 | 96 |
| | Acinetobacter radioresistens SK82 | MPMX26_00104 | | ATP synthase subunit beta 1 | no data | 53 | 96 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU0775 | atpD | ATP synthase, F1 beta subunit (TIGR) | no data | 53 | 97 |
| | Acinetobacter baumannii LAC-4 | RR41_RS18135 | | F0F1 ATP synthase subunit beta | no data | 53 | 96 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_2315 | atpB | F0F1 ATP synthase subunit beta | no data | 54 | 97 |
| | Azospirillum brasilense Sp245 | AZOBR_RS04010 | | F0F1 ATP synthase subunit beta | no data | 54 | 96 |
| | Sinorhizobium meliloti 1021 | SMc02501 | | F0F1 ATP synthase subunit beta | no data | 52 | 98 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c25090 | | ATP synthase subunit beta | no data | 52 | 97 |
| | Rhodospirillum rubrum S1H | Rru_A1226 | | ATP synthase F1, beta subunit (NCBI) | no data | 53 | 97 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS04070 | | F0F1 ATP synthase subunit beta | no data | 53 | 98 |
| | Lysobacter sp. OAE881 | ABIE51_RS18370 | | F0F1 ATP synthase subunit beta | no data | 52 | 96 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_2831 | | F0F1 ATP synthase subunit beta (RefSeq) | no data | 52 | 97 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS20160 | | ATP synthase F0F1 subunit beta | no data | 52 | 97 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS15770 | | F0F1 ATP synthase subunit beta | no data | 51 | 97 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS20935 | | ATP synthase subunit beta | no data | 53 | 96 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.4571.1 | | ATP synthase beta chain (EC 3.6.3.14) | no data | 51 | 97 |
| | Pantoea sp. MT58 | IAI47_00255 | | F0F1 ATP synthase subunit beta | no data | 53 | 96 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS19080 | | F0F1 ATP synthase subunit beta | no data | 53 | 96 |
| | Xanthobacter sp. DMC5 | GFF3968 | | ATP synthase subunit beta | no data | 53 | 96 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS19385 | | F0F1 ATP synthase subunit beta | no data | 52 | 97 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02396 | | ATP synthase F1 subcomplex beta subunit | no data | 52 | 97 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS12720 | | F0F1 ATP synthase subunit beta | no data | 52 | 97 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS12485 | | F0F1 ATP synthase subunit beta | strong | 50 | 97 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS08465 | | F0F1 ATP synthase subunit beta | no data | 52 | 97 |
| | Shewanella sp. ANA-3 | Shewana3_4130 | | F0F1 ATP synthase subunit beta (RefSeq) | no data | 52 | 97 |
| | Dechlorosoma suillum PS | Dsui_0857 | | ATP synthase, F1 beta subunit | no data | 52 | 97 |
| | Paraburkholderia graminis OAS925 | ABIE53_000251 | | F-type H+-transporting ATPase subunit beta | no data | 52 | 97 |
| | Dickeya dianthicola ME23 | DZA65_RS22405 | | F0F1 ATP synthase subunit beta | no data | 53 | 96 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS08810 | | F0F1 ATP synthase subunit beta | no data | 52 | 97 |
| | Ralstonia solanacearum UW163 | UW163_RS04800 | | F0F1 ATP synthase subunit beta | no data | 52 | 97 |
| | Shewanella oneidensis MR-1 | SO4747 | atpD | ATP synthase F1, beta subunit (NCBI ptt file) | no data | 52 | 97 |
| | Dickeya dianthicola 67-19 | HGI48_RS21425 | | F0F1 ATP synthase subunit beta | no data | 53 | 96 |
| | Klebsiella michiganensis M5al | BWI76_RS00185 | | ATP synthase subunit beta | no data | 53 | 96 |
| | Dickeya dadantii 3937 | DDA3937_RS21560 | | F0F1 ATP synthase subunit beta | no data | 53 | 96 |
| | Shewanella loihica PV-4 | Shew_3845 | | F0F1 ATP synthase subunit beta (RefSeq) | no data | 52 | 97 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_1766 | | ATP synthase, F1 beta subunit | no data | 49 | 98 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_08795 | | F0F1 ATP synthase subunit beta | insig. | 53 | 96 |
| | Alteromonas macleodii MIT1002 | MIT1002_04113 | | ATP synthase subunit beta | no data | 52 | 97 |
| | Agrobacterium fabrum C58 | Atu2622 | | ATP synthase beta chain | no data | 52 | 96 |
| | Rhizobium sp. OAE497 | ABIE40_RS17910 | | F0F1 ATP synthase subunit beta | no data | 53 | 96 |
| | Rhodopseudomonas palustris CGA009 | TX73_000915 | | F0F1 ATP synthase subunit beta | no data | 52 | 97 |
| | Ralstonia solanacearum GMI1000 | RS_RS16620 | | ATP synthase subunit beta | no data | 52 | 97 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_04321 | | ATP synthase subunit beta | no data | 53 | 96 |
| | Kangiella aquimarina DSM 16071 | B158DRAFT_0388 | | ATP synthase, F1 beta subunit | no data | 53 | 96 |
| | Pectobacterium carotovorum WPP14 | HER17_RS21645 | | F0F1 ATP synthase subunit beta | no data | 53 | 96 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_09030 | atpD | F0F1 ATP synthase subunit beta | no data | 52 | 96 |
| | Erwinia tracheiphila SCR3 | LU632_RS24770 | atpD | F0F1 ATP synthase subunit beta | no data | 52 | 96 |
| | Rahnella sp. WP5 | EX31_RS06095 | | F0F1 ATP synthase subunit beta | no data | 52 | 96 |
| | Shewanella amazonensis SB2B | Sama_3644 | | F0F1 ATP synthase subunit beta (RefSeq) | no data | 51 | 97 |
| | Dinoroseobacter shibae DFL-12 | Dshi_2934 | | ATP synthase F1, beta subunit (RefSeq) | no data | 52 | 97 |
| | Bosea sp. OAE506 | ABIE41_RS07900 | | F0F1 ATP synthase subunit beta | no data | 51 | 97 |
| | Cellulophaga baltica 18 | M666_RS03540 | | F0F1 ATP synthase subunit beta | no data | 51 | 96 |
| | Escherichia coli BL21 | ECD_03616 | | F1 sector of membrane-bound ATP synthase, beta subunit | no data | 53 | 96 |
| | Escherichia fergusonii Becca | EFB2_04901 | | ATP synthase subunit beta | no data | 53 | 96 |
| | Escherichia coli ECOR27 | NOLOHH_06965 | atpD | F0F1 ATP synthase subunit beta | no data | 53 | 96 |
| | Escherichia coli ECOR38 | HEPCGN_13545 | atpD | F0F1 ATP synthase subunit beta | no data | 53 | 96 |
| | Escherichia coli ECRC100 | OKFHMN_14830 | atpD | F0F1 ATP synthase subunit beta | no data | 53 | 96 |
| | Escherichia coli ECRC101 | MCAODC_05335 | atpD | F0F1 ATP synthase subunit beta | no data | 53 | 96 |
| | Escherichia coli ECRC102 | NIAGMN_12585 | atpD | F0F1 ATP synthase subunit beta | no data | 53 | 96 |
| | Escherichia coli ECRC62 | BNILDI_04560 | atpD | F0F1 ATP synthase subunit beta | no data | 53 | 96 |
| | Escherichia coli ECRC98 | JDDGAC_18450 | atpD | F0F1 ATP synthase subunit beta | no data | 53 | 96 |
| | Escherichia coli ECRC99 | KEDOAH_13320 | atpD | F0F1 ATP synthase subunit beta | no data | 53 | 96 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS21470 | | F0F1 ATP synthase subunit beta | no data | 53 | 96 |
| | Escherichia coli BW25113 | b3732 | atpD | F0F1 ATP synthase subunit beta (NCBI) | no data | 53 | 96 |
| | Pseudomonas sp. S08-1 | OH686_12715 | | ATP synthase F1, beta subunit | no data | 53 | 96 |
| | Erwinia amylovora T8 | OLJFJH_05275 | | F0F1 ATP synthase subunit beta | no data | 52 | 96 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS29285 | | F0F1 ATP synthase subunit beta | no data | 52 | 97 |
| | Pseudomonas segetis P6 | MPMX49_00234 | | ATP synthase subunit beta | no data | 53 | 96 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_4008 | | ATP synthase, F1 beta subunit | no data | 53 | 96 |
| | Enterobacter sp. TBS_079 | MPMX20_04635 | | ATP synthase subunit beta | no data | 53 | 96 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF1726 | | ATP synthase beta chain (EC 3.6.3.14) | no data | 53 | 96 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS26110 | atpD;go_component=mitochondrial | F0F1 ATP synthase subunit beta | no data | 53 | 96 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_25640 | | F0F1 ATP synthase subunit beta | no data | 53 | 96 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS58530 | atpD;go_component=mitochondrial | F0F1 ATP synthase subunit beta | no data | 53 | 96 |
| | Azospirillum sp. SherDot2 | MPMX19_02101 | | ATP synthase subunit beta | no data | 53 | 96 |
| | Bifidobacterium breve UCC2003 | BBR_RS12025 | | F0F1 ATP synthase subunit beta | no data | 51 | 97 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS14970 | | F0F1 ATP synthase subunit beta | sig. | 50 | 96 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS18655 | | F0F1 ATP synthase subunit beta | strong | 50 | 96 |
| | Pseudomonas sp. RS175 | PFR28_04576 | | ATP synthase subunit beta | no data | 52 | 96 |
| | Mycobacterium tuberculosis H37Rv | Rv1310 | | Probable ATP synthase beta chain AtpD | no data | 51 | 96 |
| | Pseudomonas stutzeri RCH2 | Psest_4354 | | ATP synthase, F1 beta subunit | no data | 52 | 96 |
| | Marinobacter adhaerens HP15 | HP15_3679 | | ATP synthase subunit beta | no data | 50 | 97 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT0711 | | ATP synthase beta chain (NCBI ptt file) | no data | 50 | 96 |
| | Pseudomonas putida KT2440 | PP_5413 | | ATP synthase subunit beta | no data | 52 | 96 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_02413 | | ATP synthase F1, beta subunit | strong | 50 | 96 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_0970 | | ATP synthase, F1 beta subunit | no data | 53 | 96 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS21805 | | F0F1 ATP synthase subunit beta | no data | 53 | 96 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_10390 | | ATP synthase subunit beta | no data | 52 | 96 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_5121 | | ATP synthase F1, beta subunit | no data | 52 | 96 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_5121 | | ATP synthase F1, beta subunit | no data | 52 | 96 |
| | Pseudomonas sp. BP01 | JOY50_RS08435 | atpD | F0F1 ATP synthase subunit beta | no data | 52 | 96 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_11720 | | ATP synthase subunit beta | no data | 52 | 96 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS06405 | | F0F1 ATP synthase subunit beta | no data | 50 | 97 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS30120 | | F0F1 ATP synthase subunit beta | no data | 52 | 96 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS30120 | | F0F1 ATP synthase subunit beta | no data | 52 | 96 |