| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Pseudomonas simiae WCS417 | PS417_00025 | | transcriptional regulator | cofit | 100 | 100 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS00025 | | response regulator transcription factor | insig. | 99 | 100 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS00025 | | response regulator transcription factor | insig. | 99 | 100 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_00213 | | Transcriptional regulatory protein CseB | cofit | 97 | 100 |
| o | Pseudomonas orientalis W4I3 | QF045_RS02970 | | response regulator transcription factor | insig. | 95 | 100 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_10565 | | transcriptional regulator | insig. | 88 | 99 |
| o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1925 | | Two-component response regulator | insig. | 87 | 100 |
| o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4194 | | Two-component response regulator | cofit | 86 | 100 |
| o | Pseudomonas sp. RS175 | PFR28_04596 | | hypothetical protein | sig. | 85 | 100 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_11620 | | transcriptional regulator | strong | 85 | 100 |
| o | Pseudomonas sp. DMC3 | GFF580 | | Transcriptional regulatory protein CseB | insig. | 83 | 100 |
| o | Pseudomonas aeruginosa MRSN321 | DY961_RS27625 | | response regulator transcription factor | insig. | 83 | 98 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_20790 | | DNA-binding response regulator | insig. | 83 | 98 |
| o | Pseudomonas aeruginosa PUPa3 | DQ20_RS48020 | | response regulator transcription factor | insig. | 83 | 98 |
| o | Pseudomonas segetis P6 | ACVTMO_RS05070 | | response regulator transcription factor | insig. | 66 | 98 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS24795 | | XRE family transcriptional regulator | insig. | 44 | 99 |
| o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_06535 | | two component transcriptional regulator, winged helix family | insig. | 45 | 100 |
| o | Paraburkholderia graminis OAS925 | ABIE53_006190 | | DNA-binding response OmpR family regulator | sig. | 45 | 97 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS29935 | | response regulator transcription factor | insig. | 44 | 97 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS41900 | | response regulator transcription factor | insig. | 43 | 98 |
| o | Caulobacter crescentus NA1000 | CCNA_03434 | | two-component response regulator | insig. | 42 | 98 |
| o | Caulobacter crescentus NA1000 Δfur | CCNA_03434 | | two-component response regulator | cofit | 42 | 98 |
| o | Variovorax sp. OAS795 | ABID97_RS04425 | | response regulator transcription factor | insig. | 43 | 98 |
| o | Variovorax sp. SCN45 | GFF4909 | | Two-component transcriptional response regulator, OmpR family | insig. | 43 | 98 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS22005 | | transcriptional regulator | insig. | 40 | 97 |
| | Variovorax sp. OAS795 | ABID97_RS27135 | | response regulator transcription factor | insig. | 38 | 99 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS00435 | | transcriptional regulator | insig. | 42 | 99 |
| o | Marinobacter adhaerens HP15 | HP15_1185 | | two component transcriptional regulator, winged helix family | insig. | 38 | 100 |
| o | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF5520 | | DNA-binding response regulator | insig. | 40 | 98 |
| o | Acidovorax sp. GW101-3H11 | Ac3H11_1761 | | DNA-binding response regulator | insig. | 45 | 88 |
| | Paraburkholderia graminis OAS925 | ABIE53_004242 | | two-component system OmpR family response regulator | insig. | 39 | 98 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_4648 | | DNA-binding response regulator | insig. | 42 | 91 |
| o | Ralstonia sp. UNC404CL21Col | ABZR87_RS10280 | | response regulator transcription factor | insig. | 38 | 97 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS08680 | | response regulator transcription factor | insig. | 39 | 98 |
| o | Ralstonia solanacearum PSI07 | RPSI07_RS18910 | | DNA-binding response regulator | insig. | 41 | 85 |
| o | Ralstonia solanacearum GMI1000 | RS_RS05330 | | DNA-binding response regulator | insig. | 42 | 83 |
| o | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS14550 | | DNA-binding response regulator | cofit | 38 | 97 |
| o | Ralstonia solanacearum UW163 | UW163_RS12015 | | DNA-binding response regulator | insig. | 38 | 97 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS07870 | | response regulator transcription factor | insig. | 34 | 99 |
| | Ralstonia solanacearum GMI1000 | RS_RS02715 | | DNA-binding response regulator | insig. | 35 | 100 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS21305 | | DNA-binding response regulator | insig. | 35 | 100 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS11895 | | DNA-binding response regulator | insig. | 35 | 100 |
| | Ralstonia solanacearum UW163 | UW163_RS01695 | | DNA-binding response regulator | insig. | 35 | 100 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS17505 | | transcriptional regulator | insig. | 41 | 78 |
| | Paraburkholderia graminis OAS925 | ABIE53_003661 | | two-component system OmpR family response regulator | insig. | 34 | 98 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS27660 | | response regulator transcription factor | insig. | 35 | 98 |
| | Shewanella loihica PV-4 | Shew_3419 | | two component transcriptional regulator (RefSeq) | insig. | 36 | 98 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05694 | | two component transcriptional regulator, winged helix family | insig. | 33 | 97 |
| | Mycobacterium tuberculosis H37Rv | Rv1033c | | Two component transcriptional regulator TrcR | insig. | 36 | 96 |
| | Paraburkholderia graminis OAS925 | ABIE53_004087 | | two-component system phosphate regulon response regulator PhoB | sig. | 34 | 96 |
| | Rhodopseudomonas palustris CGA009 | TX73_024820 | | phosphate regulon transcriptional regulator PhoB | insig. | 37 | 85 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS22630 | | transcriptional regulator | insig. | 34 | 96 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_23115 | | two-component system response regulator CreB | insig. | 41 | 80 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_1369 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | strong | 35 | 99 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03209 | | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain | insig. | 33 | 96 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS37010 | creB;go_function=DNA | two-component system response regulator CreB | insig. | 41 | 80 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS06960 | | chemotaxis protein CheY | insig. | 38 | 75 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS09450 | | response regulator transcription factor | insig. | 33 | 97 |
| | Lysobacter sp. OAE881 | ABIE51_RS00875 | | response regulator transcription factor | strong | 37 | 79 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_461 | | Phosphate regulon transcriptional regulatory protein PhoB (SphR) | cofit | 33 | 97 |
| | Azospirillum sp. SherDot2 | MPMX19_02587 | | Phosphate regulon transcriptional regulatory protein PhoB | cofit | 38 | 81 |
| | Azospirillum brasilense Sp245 | AZOBR_RS01105 | | PhoB family transcriptional regulator | insig. | 39 | 81 |
| | Methylophilus sp. DMC18 | GFF2713 | | Transcriptional regulatory protein OmpR | no data | 36 | 84 |
| | Caulobacter crescentus NA1000 | CCNA_00296 | | phosphate regulon response regulator PhoB | strong | 39 | 83 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_00296 | | phosphate regulon response regulator PhoB | cofit | 39 | 83 |
| | Pseudomonas sp. BP01 | JOY50_RS03360 | | response regulator | insig. | 37 | 97 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_02615 | | DNA-binding response regulator | sig. | 34 | 97 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS06335 | | chemotaxis protein CheY | insig. | 33 | 96 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS22315 | creB;go_function=DNA | two-component system response regulator CreB | insig. | 40 | 80 |
| | Pseudomonas stutzeri RCH2 | Psest_1602 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | insig. | 41 | 78 |
| | Pseudomonas sp. RS175 | PFR28_02328 | | Transcriptional regulatory protein QseB | sig. | 34 | 97 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_0556 | srrB | two component transcriptional regulator, winged helix family | strong | 35 | 88 |
| | Kangiella aquimarina DSM 16071 | B158DRAFT_0334 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | insig. | 34 | 85 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS20255 | | response regulator transcription factor | insig. | 33 | 96 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_2868 | | Response regulator receiver:Transcriptional regulatory protein, C-terminal | insig. | 32 | 96 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2868 | | Response regulator receiver:Transcriptional regulatory protein, C-terminal | insig. | 32 | 96 |
| | Alteromonas macleodii MIT1002 | MIT1002_03258 | | Swarming motility regulation protein RssB | insig. | 40 | 75 |
| | Erwinia amylovora T8 | OLJFJH_18185 | | phosphate response regulator transcription factor PhoB | insig. | 40 | 76 |
| | Variovorax sp. SCN45 | GFF2463 | | Response regulator BaeR | insig. | 37 | 98 |
| | Azospirillum sp. SherDot2 | MPMX19_03749 | | KDP operon transcriptional regulatory protein KdpE | insig. | 36 | 97 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_4389 | | Two-component system response regulator OmpR | sig. | 34 | 95 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS04745 | | response regulator transcription factor | insig. | 32 | 97 |
| | Rhodospirillum rubrum S1H | Rru_A0603 | | Two component Transcriptional regulator, Winged helix family (NCBI) | cofit | 38 | 84 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS08970 | | phosphate regulon transcriptional regulator PhoB | no data | 36 | 81 |
| | Pseudomonas sp. S08-1 | OH686_04665 | | Two-component system response regulator QseB | insig. | 35 | 97 |
| | Dickeya dianthicola ME23 | DZA65_RS15390 | | transcriptional regulator TctD | insig. | 34 | 97 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_945 | | Response regulator BaeR | insig. | 36 | 98 |
| | Azospirillum brasilense Sp245 | AZOBR_RS23980 | | Fis family transcriptional regulator | insig. | 35 | 97 |
| | Xanthobacter sp. DMC5 | GFF2342 | | Phosphate regulon transcriptional regulatory protein PhoB | no data | 37 | 88 |
| | Pseudomonas segetis P6 | ACVTMO_RS18790 | | response regulator transcription factor | strong | 37 | 98 |
| | Fusobacterium nucleatum SB010 | HUW76_07205 | | response regulator transcription factor | strong | 33 | 97 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS21085 | | response regulator transcription factor | sig. | 36 | 76 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS09520 | | transcriptional regulator | insig. | 33 | 96 |
| | Pseudomonas sp. BP01 | JOY50_RS17775 | creB | two-component system response regulator CreB | insig. | 38 | 80 |
| | Pseudomonas segetis P6 | ACVTMO_RS00555 | phoB | phosphate regulon transcriptional regulator PhoB | insig. | 39 | 76 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4737 | | Two-component response regulator CreB | insig. | 38 | 80 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_3651 | | phosphate regulon transcriptional regulatory protein PhoB | no data | 36 | 81 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.1026.1 | | Tricarboxylate transport transcriptional regulator TctD | cofit | 36 | 78 |
| | Rhizobium sp. OAE497 | ABIE40_RS02310 | | phosphate regulon transcriptional regulator PhoB | insig. | 36 | 97 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS00500 | | transcriptional regulator | insig. | 35 | 95 |