Homologs of PS417_18945 from Pseudomonas simiae WCS417

endoribonuclease
SEED: Bona fide RidA/YjgF/TdcF/RutC subgroup

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas simiae WCS417 PS417_18945 endoribonuclease insig. 100 100
o Pseudomonas fluorescens SBW25 PFLU_RS20985 RidA family protein insig. 99 99
o Pseudomonas fluorescens SBW25-INTG PFLU_RS20985 RidA family protein insig. 99 99
o Klebsiella michiganensis M5al BWI76_RS12855 enamine deaminase RidA insig. 88 99
o Pseudomonas fluorescens FW300-N2E3 AO353_29115 enamine deaminase RidA insig. 90 96
o Pseudomonas fluorescens FW300-N2C3 AO356_25390 enamine deaminase RidA insig. 90 97
o Pseudomonas sp. RS175 PFR28_02139 hypothetical protein insig. 90 97
o Paraburkholderia sabiae LMG 24235 QEN71_RS11215 RidA family protein cofit 88 99
o Burkholderia phytofirmans PsJN BPHYT_RS11730 endoribonuclease no data 87 99
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04942 Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family insig. 88 98
o Paraburkholderia graminis OAS925 ABIE53_001518 enamine deaminase RidA (YjgF/YER057c/UK114 family) sig. 88 98
o Serratia liquefaciens MT49 IAI46_02520 RidA family protein insig. 86 97
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1341 Bona fide RidA/YjgF/TdcF/RutC subgroup insig. 90 91
o Pseudomonas putida KT2440 PP_3574 conserved protein of unknown function insig. 88 91
o Azospirillum sp. SherDot2 MPMX19_03400 hypothetical protein insig. 64 97
o Azospirillum brasilense Sp245 AZOBR_RS30435 endoribonuclease insig. 62 97
  Bosea sp. OAE506 ABIE41_RS18410 Rid family hydrolase insig. 38 99
  Bosea sp. OAE506 ABIE41_RS18410 Rid family hydrolase insig. 40 79
  Bosea sp. OAE506 ABIE41_RS18410 Rid family hydrolase insig. 35 93
  Marinobacter adhaerens HP15 HP15_2596 endoribonuclease L-PSP insig. 38 74
  Pseudomonas simiae WCS417 PS417_17935 endoribonuclease L-PSP insig. 36 91
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_14370 hypothetical protein strong 36 82
  Sinorhizobium meliloti 1021 SMa2289 hypothetical protein insig. 33 78
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS07390 RidA family protein insig. 34 74
  Bacteroides stercoris CC31F HMPREF1181_RS10885 RidA family protein strong 34 76
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS02020 RidA family protein insig. 35 77
  Variovorax sp. SCN45 GFF4158 hypothetical protein insig. 30 80
  Pectobacterium carotovorum WPP14 HER17_RS18785 RidA family protein insig. 38 72
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS23015 RidA family protein no data 37 75
  Ralstonia solanacearum UW163 UW163_RS16265 RidA family protein no data 37 75
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01079 Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family insig. 38 78
  Synechococcus elongatus PCC 7942 Synpcc7942_2408 hypothetical protein insig. 35 78
  Paraburkholderia sabiae LMG 24235 QEN71_RS33350 RidA family protein insig. 25 74
  Lysobacter sp. OAE881 ABIE51_RS17260 RidA family protein strong 34 77
  Variovorax sp. OAS795 ABID97_RS01305 Rid family hydrolase insig. 30 80
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1205.1 hypothetical protein cofit 36 78
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS04265 Rid family hydrolase insig. 33 74
  Ralstonia solanacearum GMI1000 RS_RS17380 RidA family protein no data 36 75
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS22825 reactive intermediate/imine deaminase strong 33 78
  Ralstonia solanacearum PSI07 RPSI07_RS00250 RidA family protein no data 36 75
  Bosea sp. OAE506 ABIE41_RS11850 RidA family protein insig. 32 88
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS11845 RidA family protein strong 35 78
  Pseudomonas putida KT2440 PP_2689 putative Endoribonuclease insig. 32 74
  Rhodopseudomonas palustris CGA009 TX73_004470 RidA family protein insig. 31 76
  Bacteroides thetaiotaomicron VPI-5482 BT1336 putative translation initiation inhibitor (NCBI ptt file) strong 32 76
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS17245 RidA family protein no data 35 78
  Pseudomonas simiae WCS417 PS417_07990 endoribonuclease L-PSP insig. 35 76
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4392 Translation initiation inhibitor insig. 33 82
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01492 Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family insig. 31 78
  Bacteroides ovatus ATCC 8483 BACOVA_00589 putative endoribonuclease L-PSP cofit 32 76
  Pseudomonas fluorescens FW300-N2C3 AO356_12625 cytochrome C2 insig. 32 82
  Pseudomonas fluorescens GW456-L13 PfGW456L13_813 Translation initiation inhibitor insig. 32 84
  Variovorax sp. SCN45 GFF6707 RidA/YER057c/UK114 superfamily protein insig. 45 46
  Ralstonia sp. UNC404CL21Col ABZR87_RS16565 RidA family protein no data 33 75
  Cupriavidus basilensis FW507-4G11 RR42_RS34135 hypothetical protein insig. 32 77
  Pseudomonas sp. S08-1 OH686_18475 RidA/YER057c/UK114 superfamily, group 7, YjgH-like protein insig. 32 77
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_179 Endoribonuclease L-PSP no data 34 76
  Paraburkholderia sabiae LMG 24235 QEN71_RS41190 RidA family protein no data 32 66
  Bifidobacterium breve UCC2003 BBR_RS12070 endoribonuclease L-PSP sig. 34 76
  Pseudomonas sp. RS175 PFR28_04398 2-iminobutanoate/2-iminopropanoate deaminase sig. 33 82
  Rhodanobacter sp. FW510-T8 OKGIIK_12095 ridA reactive intermediate/imine deaminase cofit 32 78
  Variovorax sp. OAS795 ABID97_RS22895 RidA family protein insig. 44 46
  Pseudomonas syringae pv. syringae B728a Psyr_2243 Endoribonuclease L-PSP sig. 33 76
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2243 Endoribonuclease L-PSP insig. 33 76
  Pseudomonas fluorescens SBW25 PFLU_RS29375 RidA family protein insig. 32 84
  Pseudomonas fluorescens SBW25-INTG PFLU_RS29375 RidA family protein insig. 32 84
  Magnetospirillum magneticum AMB-1 AMB_RS19400 RidA family protein insig. 32 76
  Pseudomonas simiae WCS417 PS417_27700 cytochrome C2 no data 31 84
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_931 Histidine ABC transporter, histidine-binding periplasmic protein precursor HisJ (TC 3.A.1.3.1) insig. 45 44
  Acinetobacter radioresistens SK82 MPMX26_02797 2-iminobutanoate/2-iminopropanoate deaminase strong 32 77
  Bosea sp. OAE506 ABIE41_RS06350 RidA family protein insig. 32 75
  Pseudomonas fluorescens SBW25 PFLU_RS29515 RidA family protein strong 30 78
  Pseudomonas fluorescens SBW25-INTG PFLU_RS29515 RidA family protein strong 30 78
  Pseudomonas simiae WCS417 PS417_27835 endoribonuclease strong 30 78
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2145 Translation initiation inhibitor insig. 30 84
  Pseudomonas syringae pv. syringae B728a Psyr_0236 Endoribonuclease L-PSP no data 29 84
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0236 Endoribonuclease L-PSP insig. 29 84
  Pseudomonas sp. RS175 PFR28_04425 2-iminobutanoate/2-iminopropanoate deaminase strong 30 78
  Ralstonia sp. UNC404CL21Col ABZR87_RS16800 RidA family protein insig. 29 84
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS18400 RidA family protein strong 33 77
  Pseudomonas fluorescens GW456-L13 PfGW456L13_779 Bona fide RidA/YjgF/TdcF/RutC subgroup strong 30 78
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2112 Bona fide RidA/YjgF/TdcF/RutC subgroup strong 30 78
  Pseudomonas fluorescens FW300-N2E3 AO353_09285 reactive intermediate/imine deaminase strong 30 78
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4360 Bona fide RidA/YjgF/TdcF/RutC subgroup strong 30 78
  Serratia liquefaciens MT49 IAI46_09040 pyrimidine utilization protein C insig. 27 73
  Paraburkholderia graminis OAS925 ABIE53_004559 enamine deaminase RidA (YjgF/YER057c/UK114 family) no data 33 74
  Pseudomonas sp. RS175 PFR28_02561 RutC family protein YjgH insig. 32 81
  Rhizobium sp. OAE497 ABIE40_RS29345 Rid family hydrolase insig. 31 78
  Pseudomonas fluorescens FW300-N2C3 AO356_12475 reactive intermediate/imine deaminase strong 30 78
  Pseudomonas putida KT2440 PP_5303 aminoacrylate/iminopropionate hydrolase/deaminase strong 29 78
  Enterobacter asburiae PDN3 EX28DRAFT_1916 pyrimidine utilization protein C insig. 26 73
  Burkholderia phytofirmans PsJN BPHYT_RS35450 endoribonuclease L-PSP no data 33 74
  Phaeobacter inhibens DSM 17395 PGA1_c12540 Putative translation initiation inhibitor, yjgF family insig. 31 79
  Phocaeicola dorei CL03T12C01 ABI39_RS14715 RidA family protein strong 33 77
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3622 Bona fide RidA/YjgF/TdcF/RutC subgroup insig. 32 77
  Rhodanobacter denitrificans MT42 LRK55_RS11525 RidA family protein cofit 32 78
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS11800 RidA family protein strong 32 78
  Pseudomonas fluorescens FW300-N2E3 AO353_09150 cytochrome C2 sig. 30 84
  Sinorhizobium meliloti 1021 SMc03796 hypothetical protein insig. 29 76
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03698 Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family no data 32 74