| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
|---|
| | Variovorax sp. SCN45 | GFF3066 | | Nitrogen regulation protein NR(I), GlnG (=NtrC) | no data | 100 | 100 |
| o | Variovorax sp. OAS795 | ABID97_RS09945 | | nitrogen regulation protein NR(I) | cofit | 91 | 100 |
| o | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF5269 | | Nitrogen regulation protein NR(I) | insig. | 81 | 100 |
| o | Acidovorax sp. GW101-3H11 | Ac3H11_4432 | | Nitrogen regulation protein NR(I) | strong | 74 | 100 |
| o | Ralstonia sp. UNC404CL21Col | ABZR87_RS11070 | | nitrogen regulation protein NR(I) | strong | 72 | 100 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS12980 | | chemotaxis protein CheY | strong | 71 | 100 |
| o | Ralstonia solanacearum GMI1000 | RS_RS06320 | | nitrogen regulation protein NR(I) | no data | 72 | 100 |
| o | Ralstonia solanacearum PSI07 | RPSI07_RS17815 | | nitrogen regulation protein NR(I) | insig. | 71 | 100 |
| o | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS15540 | | nitrogen regulation protein NR(I) | no data | 72 | 100 |
| o | Ralstonia solanacearum UW163 | UW163_RS13000 | | nitrogen regulation protein NR(I) | no data | 72 | 100 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS05675 | | nitrogen regulation protein NR(I) | insig. | 69 | 100 |
| o | Paraburkholderia graminis OAS925 | ABIE53_002804 | | two-component system nitrogen regulation response regulator GlnG | strong | 69 | 100 |
| o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00454 | | nitrogen metabolism transcriptional regulator, NtrC, Fis family | sig. | 70 | 100 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS12935 | | chemotaxis protein CheY | strong | 69 | 100 |
| o | Herbaspirillum seropedicae SmR1 | HSERO_RS15680 | | chemotaxis protein CheY | strong | 69 | 100 |
| o | Dechlorosoma suillum PS | Dsui_1051 | | nitrogen regulation protein NR(I) | strong | 65 | 100 |
| o | Methylophilus sp. DMC18 | GFF2024 | | DNA-binding transcriptional regulator NtrC | strong | 62 | 100 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_09730 | | nitrogen regulation protein NR(I) | strong | 55 | 99 |
| o | Pseudomonas sp. RS175 | PFR28_04944 | | DNA-binding transcriptional regulator NtrC | strong | 55 | 99 |
| o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_3826 | | Nitrogen regulation protein NR(I) | strong | 55 | 99 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS01685 | | nitrogen regulation protein NR(I) | sig. | 55 | 99 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS01685 | | nitrogen regulation protein NR(I) | strong | 55 | 99 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_00547 | | DNA-binding transcriptional regulator NtrC | insig. | 55 | 99 |
| o | Pseudomonas simiae WCS417 | PS417_01635 | | nitrogen regulation protein NR(I) | strong | 55 | 99 |
| o | Pseudomonas orientalis W4I3 | QF045_RS04705 | | nitrogen regulation protein NR(I) | insig. | 55 | 99 |
| o | Pseudomonas sp. DMC3 | GFF4081 | | DNA-binding transcriptional regulator NtrC | strong | 55 | 99 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_12145 | | nitrogen regulation protein NR(I) | strong | 55 | 99 |
| o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1611 | | Nitrogen regulation protein NR(I) | strong | 55 | 99 |
| o | Pseudomonas segetis P6 | ACVTMO_RS21260 | ntrC | nitrogen regulation protein NR(I) | strong | 55 | 99 |
| o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_347 | | Nitrogen regulation protein NR(I) | strong | 55 | 99 |
| o | Pseudomonas syringae pv. syringae B728a | Psyr_4822 | | Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) | sig. | 54 | 99 |
| o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_4822 | | Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) | no data | 54 | 99 |
| o | Pseudomonas sp. S08-1 | OH686_10640 | | nitrogen regulation protein NR(I) | cofit | 55 | 99 |
| o | Pseudomonas putida KT2440 | PP_5048 | | two-component system DNA-binding transcriptional dual regulator GlnL/GlnG | strong | 55 | 99 |
| o | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF2220 | | Nitrogen regulation protein NR(I) | strong | 55 | 99 |
| o | Pseudomonas sp. BP01 | JOY50_RS09450 | ntrC | nitrogen regulation protein NR(I) | cofit | 55 | 99 |
| o | Pseudomonas aeruginosa MRSN321 | DY961_RS11455 | ntrC;inference=COORDINATES | two-component system response regulator NtrC | strong | 55 | 99 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_27895 | | two-component system response regulator NtrC | sig. | 55 | 99 |
| o | Pseudomonas aeruginosa PUPa3 | DQ20_RS50645 | ntrC;inference=COORDINATES | two-component system response regulator NtrC | strong | 55 | 99 |
| o | Pseudomonas sp. SVBP6 | COO64_RS13325 | ntrC | nitrogen regulation protein NR(I) | insig. | 55 | 99 |
| o | Enterobacter sp. TBS_079 | MPMX20_04597 | | DNA-binding transcriptional regulator NtrC | strong | 56 | 99 |
| o | Enterobacter asburiae PDN3 | EX28DRAFT_4350 | | nitrogen regulation protein NR(I) | insig. | 56 | 99 |
| o | Shewanella oneidensis MR-1 | SO4472 | ntrC | nitrogen regulation protein NR(I) (NCBI ptt file) | strong | 54 | 99 |
| o | Escherichia coli ECOR27 | NOLOHH_06240 | glnG | nitrogen regulation protein NR(I) | insig. | 55 | 99 |
| o | Escherichia coli ECRC100 | OKFHMN_14110 | glnG | nitrogen regulation protein NR(I) | insig. | 55 | 99 |
| o | Escherichia coli ECRC101 | MCAODC_04610 | glnG | nitrogen regulation protein NR(I) | strong | 55 | 99 |
| o | Escherichia coli ECRC102 | NIAGMN_11865 | glnG | nitrogen regulation protein NR(I) | insig. | 55 | 99 |
| o | Escherichia coli ECRC62 | BNILDI_05290 | glnG | nitrogen regulation protein NR(I) | cofit | 55 | 99 |
| o | Escherichia coli ECRC98 | JDDGAC_17735 | glnG | nitrogen regulation protein NR(I) | no data | 55 | 99 |
| o | Escherichia coli ECRC99 | KEDOAH_14040 | glnG | nitrogen regulation protein NR(I) | no data | 55 | 99 |
| o | Escherichia coli BW25113 | b3868 | glnG | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein (NCBI) | strong | 55 | 99 |
| o | Escherichia fergusonii Becca | EFB2_04748 | | DNA-binding transcriptional regulator NtrC | strong | 55 | 99 |
| o | Escherichia coli BL21 | ECD_03753 | | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein | insig. | 55 | 99 |
| o | Pectobacterium carotovorum WPP14 | HER17_RS21440 | | nitrogen regulation protein NR(I) | cofit | 55 | 99 |
| o | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_04184 | | DNA-binding transcriptional regulator NtrC | sig. | 55 | 99 |
| o | Erwinia amylovora T8 | OLJFJH_05495 | | nitrogen regulation protein NR(I) | strong | 55 | 99 |
| o | Klebsiella pneumoniae MKP103 | KDGMDA_09000 | | nitrogen regulation protein NR(I) | insig. | 55 | 99 |
| o | Dickeya dadantii 3937 | DDA3937_RS00125 | | nitrogen regulation protein NR(I) | cofit | 55 | 99 |
| o | Dickeya dianthicola 67-19 | HGI48_RS21235 | | nitrogen regulation protein NR(I) | strong | 55 | 99 |
| o | Dickeya dianthicola ME23 | DZA65_RS22210 | | nitrogen regulation protein NR(I) | strong | 55 | 99 |
| o | Escherichia coli Nissle 1917 | ECOLIN_RS22295 | | nitrogen regulation protein NR(I) | strong | 55 | 99 |
| o | Escherichia coli ECOR38 | HEPCGN_12740 | glnG | nitrogen regulation protein NR(I) | insig. | 55 | 99 |
| o | Shewanella sp. ANA-3 | Shewana3_0258 | | nitrogen metabolism transcriptional regulator, NtrC, Fis family (RefSeq) | strong | 53 | 99 |
| o | Klebsiella pneumoniae MRSN742743 | KFA93_RS22480 | glnG;go_function=sequence-specific | nitrogen regulation protein NR(I) | insig. | 54 | 99 |
| o | Klebsiella michiganensis M5al | BWI76_RS00385 | | nitrogen assimilation regulatory protein | strong | 55 | 99 |
| o | Alteromonas macleodii MIT1002 | MIT1002_03186 | | Nitrogen regulation protein NR(I) | strong | 53 | 99 |
| o | Shewanella loihica PV-4 | Shew_3561 | | nitrogen metabolism transcriptional regulator, NtrC, Fis family (RefSeq) | strong | 52 | 99 |
| o | Pseudomonas stutzeri RCH2 | Psest_3932 | | nitrogen regulation protein NR(I) | strong | 55 | 99 |
| o | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_08285 | glnG | nitrogen regulation protein NR(I) | cofit | 54 | 99 |
| o | Shewanella amazonensis SB2B | Sama_3427 | | response regulator receiver protein (RefSeq) | strong | 54 | 99 |
| o | Pantoea sp. MT58 | IAI47_00450 | | nitrogen regulation protein NR(I) | strong | 54 | 99 |
| o | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS18895 | | nitrogen regulation protein NR(I) | strong | 54 | 99 |
| o | Erwinia tracheiphila SCR3 | LU632_RS22135 | glnG | nitrogen regulation protein NR(I) | strong | 54 | 99 |
| o | Serratia liquefaciens MT49 | IAI46_24960 | | nitrogen regulation protein NR(I) | strong | 55 | 99 |
| o | Rahnella sp. WP5 | EX31_RS15880 | | nitrogen regulation protein NR(I) | strong | 54 | 99 |
| o | Vibrio cholerae E7946 ATCC 55056 | CSW01_13865 | | nitrogen regulation protein NR(I) | insig. | 52 | 99 |
| o | Marinobacter adhaerens HP15 | HP15_425 | | two-component response regulator NtrC | strong | 54 | 99 |
| o | Acinetobacter radioresistens SK82 | MPMX26_01292 | | DNA-binding transcriptional regulator NtrC | strong | 52 | 99 |
| o | Castellaniella sp019104865 MT123 | ABCV34_RS03540 | | nitrogen regulation protein NR(I) | cofit | 52 | 100 |
| o | Acinetobacter baumannii LAC-4 | RR41_RS08030 | | nitrogen regulation protein NR(I) | insig. | 52 | 99 |
| o | Lysobacter sp. OAE881 | ABIE51_RS01360 | | nitrogen regulation protein NR(I) | cofit | 50 | 99 |
| o | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.252.1 | | Nitrogen regulation protein NtrC | strong | 48 | 98 |
| o | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS07980 | | nitrogen regulation protein NR(I) | strong | 46 | 99 |
| o | Rhodanobacter denitrificans MT42 | LRK55_RS07730 | | nitrogen regulation protein NR(I) | cofit | 46 | 99 |
| o | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS15515 | | nitrogen regulation protein NR(I) | strong | 48 | 98 |
| o | Rhodanobacter sp. FW510-T8 | OKGIIK_14465 | ntrC | nitrogen regulation protein NR(I) | sig. | 47 | 98 |
| o | Agrobacterium fabrum C58 | Atu1446 | | two component response regulator | strong | 44 | 99 |
| o | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS00570 | | nitrogen regulation protein NR(I) | sig. | 47 | 98 |
| o | Sinorhizobium meliloti 1021 | SMc01043 | | nitrogen assimilation regulatory protein | strong | 43 | 99 |
| o | Xanthobacter sp. DMC5 | GFF848 | | DNA-binding transcriptional regulator NtrC | no data | 44 | 99 |
| o | Rhizobium sp. OAE497 | ABIE40_RS09090 | | nitrogen regulation protein NR(I) | strong | 43 | 99 |
| o | Rhodospirillum rubrum S1H | Rru_A1678 | | Nitrogen Metabolism Transcriptional Regulator, NtrC, Fis Family (NCBI) | strong | 44 | 100 |
| o | Azospirillum sp. SherDot2 | MPMX19_01112 | | DNA-binding transcriptional regulator NtrC | no data | 44 | 99 |
| o | Rhodopseudomonas palustris CGA009 | TX73_013420 | | nitrogen regulation protein NR(I) | strong | 43 | 99 |
| o | Magnetospirillum magneticum AMB-1 | AMB_RS11950 | | nitrogen regulation protein NR(I) | no data | 44 | 99 |
| o | Azospirillum brasilense Sp245 | AZOBR_RS14430 | | chemotaxis protein CheY | strong | 43 | 99 |
| o | Bosea sp. OAE506 | ABIE41_RS16785 | | nitrogen regulation protein NR(I) | insig. | 44 | 99 |
| o | Sphingomonas koreensis DSMZ 15582 | Ga0059261_0137 | | nitrogen regulation protein NR(I) | strong | 43 | 99 |
| | Escherichia coli BL21 | ECD_02147 | | fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein | insig. | 44 | 78 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01490 | | Regulatory protein AtoC | insig. | 44 | 78 |
| | Escherichia coli BW25113 | b2220 | atoC | fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein (NCBI) | insig. | 44 | 78 |
| | Escherichia fergusonii Becca | EFB2_01635 | | Regulatory protein AtoC | insig. | 44 | 78 |
| | Escherichia coli ECOR38 | HEPCGN_22430 | atoC | acetoacetate metabolism transcriptional regulator AtoC | insig. | 44 | 78 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS12965 | | acetoacetate metabolism transcriptional regulator AtoC | no data | 44 | 78 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU3220 | atoC | sigma-54 dependent transcriptional regulator/response regulator (TIGR) | no data | 43 | 75 |
| o | Sphingobium sp. HT1-2 | GFF1148 | | Nitrogen regulation protein NR(I), GlnG (=NtrC) | strong | 40 | 99 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_2200 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | no data | 44 | 75 |
| | Azospirillum sp. SherDot2 | MPMX19_03461 | | Regulatory protein AtoC | insig. | 39 | 99 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_16225 | | Fis family transcriptional regulator | insig. | 38 | 99 |
| | Rhodospirillum rubrum S1H | Rru_A1385 | | Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) | cofit | 40 | 100 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS23710 | pilR;inference=COORDINATES | two-component system response regulator PilR | strong | 38 | 99 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_00790 | | two-component response regulator PilR | strong | 38 | 99 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS56175 | pilR;inference=COORDINATES | two-component system response regulator PilR | strong | 38 | 99 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS05020 | | sigma-54 dependent transcriptional regulator | strong | 37 | 100 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU0110 | ntrC | sigma-54 dependent transcriptional regulator/response regulator (TIGR) | cofit | 45 | 71 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5122 | | Type IV fimbriae expression regulatory protein PilR | insig. | 43 | 77 |
| | Lysobacter sp. OAE881 | ABIE51_RS04850 | | sigma-54 dependent transcriptional regulator | strong | 37 | 99 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS04800 | | sigma-54 dependent transcriptional regulator | cofit | 42 | 75 |
| o | Caulobacter crescentus NA1000 | CCNA_01815 | | nitrogen assimilation regulatory protein NtrC | strong | 38 | 100 |
| o | Caulobacter crescentus NA1000 Δfur | CCNA_01815 | | nitrogen assimilation regulatory protein NtrC | no data | 38 | 100 |
| | Pseudomonas simiae WCS417 | PS417_05525 | | Fis family transcriptional regulator | strong | 37 | 99 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU0118 | ntrC | sigma-54 dependent transcriptional regulator/response regulator (TIGR) | insig. | 39 | 99 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_1993 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | sig. | 37 | 100 |
| | Pseudomonas stutzeri RCH2 | Psest_0705 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | strong | 37 | 99 |
| | Dechlorosoma suillum PS | Dsui_0150 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | strong | 45 | 75 |
| | Rhodospirillum rubrum S1H | Rru_A1680 | | Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) | no data | 42 | 76 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_04380 | | response regulator | strong | 42 | 73 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS05610 | | sigma-54-dependent Fis family transcriptional regulator | strong | 43 | 76 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS05610 | | sigma-54-dependent Fis family transcriptional regulator | strong | 43 | 76 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_2109 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | strong | 43 | 75 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_15905 | | transcriptional regulator | insig. | 43 | 77 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_01730 | atoC | sigma-54-dependent Fis family transcriptional regulator | cofit | 41 | 75 |
| | Pseudomonas segetis P6 | ACVTMO_RS19460 | | sigma-54-dependent transcriptional regulator | cofit | 43 | 74 |
| | Pseudomonas sp. DMC3 | GFF4000 | | Regulatory protein AtoC | cofit | 43 | 75 |
| | Pseudomonas orientalis W4I3 | QF045_RS08450 | | sigma-54 dependent transcriptional regulator | insig. | 43 | 76 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS11070 | | sigma-54 dependent transcriptional regulator | cofit | 41 | 74 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_09510 | | sigma-54-dependent Fis family transcriptional regulator | sig. | 35 | 99 |
| | Alteromonas macleodii MIT1002 | MIT1002_01326 | | Quorum-sensing regulator protein F | insig. | 44 | 74 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS11960 | | sigma-54-dependent Fis family transcriptional regulator | no data | 41 | 76 |
| | Marinobacter adhaerens HP15 | HP15_523 | | two component, sigma54 specific, transcriptional regulator, Fis family | strong | 34 | 99 |
| | Pseudomonas sp. S08-1 | OH686_16390 | | Type IV fimbriae expression regulatory protein PilR | cofit | 44 | 70 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_1489 | | Type IV fimbriae expression regulatory protein PilR | insig. | 42 | 77 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS04990 | | sigma-54 dependent transcriptional regulator | cofit | 41 | 75 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01292 | | Regulatory protein AtoC | cofit | 37 | 99 |
| | Pseudomonas stutzeri RCH2 | Psest_4132 | | alpha-ketoglutarate DNA-binding response regulator (mifR) (from data) | strong | 45 | 73 |
| | Pseudomonas sp. SVBP6 | COO64_RS16760 | | sigma-54 dependent transcriptional regulator | insig. | 43 | 73 |
| | Methylophilus sp. DMC18 | GFF2815 | | Regulatory protein AtoC | insig. | 38 | 99 |
| | Pseudomonas putida KT2440 | PP_1066 | | C4-dicarboxylate transport transcriptional regulatory protein | strong | 43 | 73 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_17800 | | C4-dicarboxylate ABC transporter | strong | 43 | 79 |
| | Pseudomonas sp. RS175 | PFR28_03751 | | Regulatory protein AtoC | insig. | 43 | 74 |
| | Pseudomonas simiae WCS417 | PS417_22645 | | C4-dicarboxylate ABC transporter | sig. | 43 | 79 |
| | Pseudomonas sp. BP01 | JOY50_RS14825 | | sigma-54 dependent transcriptional regulator | insig. | 43 | 73 |
| | Pseudomonas orientalis W4I3 | QF045_RS24815 | | sigma-54 dependent transcriptional regulator | insig. | 45 | 71 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS24280 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 43 | 79 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS24280 | | sigma-54-dependent Fis family transcriptional regulator | strong | 43 | 79 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_0196 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | strong | 41 | 73 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04682 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | cofit | 43 | 79 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_1461 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | no data | 42 | 75 |
| | Methylophilus sp. DMC18 | GFF2304 | | Regulatory protein AtoC | cofit | 36 | 99 |
| | Pseudomonas sp. RS175 | PFR28_03462 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | strong | 43 | 79 |
| | Pseudomonas sp. RS175 | PFR28_03376 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | sig. | 42 | 73 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF4188 | | Response regulator of zinc sigma-54-dependent two-component system | insig. | 41 | 78 |
| | Escherichia coli ECOR38 | HEPCGN_11960 | zraR | sigma-54-dependent response regulator transcription factor ZraR | insig. | 43 | 75 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_3995 | | Helix-turn-helix, Fis-type | sig. | 44 | 71 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3995 | | Helix-turn-helix, Fis-type | insig. | 44 | 71 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_776 | | Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake | insig. | 42 | 73 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS01750 | | sigma-54 dependent transcriptional regulator | strong | 37 | 100 |
| | Dickeya dadantii 3937 | DDA3937_RS15640 | | two-component system response regulator GlrR | cofit | 43 | 73 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS23090 | | sigma-54-dependent response regulator transcription factor ZraR | insig. | 43 | 75 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU2934 | ntrX | sigma-54 dependent transcriptional regulator/response regulator (TIGR) | no data | 42 | 70 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5487 | | Nitrogen regulation protein NR(I) | strong | 45 | 71 |
| | Escherichia coli ECRC62 | BNILDI_06055 | zraR | sigma-54-dependent response regulator transcription factor ZraR | insig. | 43 | 75 |
| | Klebsiella michiganensis M5al | BWI76_RS01605 | | transcriptional regulatory protein ZraR | insig. | 38 | 98 |
| | Xanthobacter sp. DMC5 | GFF4834 | | Regulatory protein AtoC | insig. | 44 | 74 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_2149 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | strong | 37 | 99 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS16305 | | sigma-54 dependent transcriptional regulator | insig. | 43 | 71 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_14200 | | transcriptional regulator | insig. | 42 | 75 |
| | Dechlorosoma suillum PS | Dsui_2360 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | cofit | 43 | 73 |
| | Escherichia fergusonii Becca | EFB2_04606 | | Transcriptional regulatory protein ZraR | insig. | 43 | 75 |
| | Caulobacter crescentus NA1000 | CCNA_03424 | | AAA-family response regulator tacA | strong | 37 | 100 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_03424 | | AAA-family response regulator tacA | cofit | 37 | 100 |
| | Escherichia coli BW25113 | b4004 | zraR | fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein (NCBI) | insig. | 43 | 75 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_2095 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | sig. | 41 | 74 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_28370 | | two-component system response regulator QseF/GlrR | insig. | 43 | 73 |
| | Klebsiella pneumoniae MRSN742743 | KFA93_RS04790 | glrR;go_function=ATP | two-component system response regulator GlrR | sig. | 43 | 73 |
| | Escherichia coli BL21 | ECD_03881 | | fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein | insig. | 43 | 75 |
| | Pseudomonas sp. BP01 | JOY50_RS27675 | | sigma-54 dependent transcriptional regulator | cofit | 39 | 80 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_16265 | | Fis family transcriptional regulator | strong | 42 | 73 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5565 | | Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake | insig. | 42 | 73 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_09635 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 38 | 78 |
| | Marinobacter adhaerens HP15 | HP15_2328 | | two component, sigma54 specific, transcriptional regulator, Fis family | strong | 36 | 99 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_03805 | | C4-dicarboxylate ABC transporter | strong | 44 | 71 |
| | Dickeya dianthicola ME23 | DZA65_RS16815 | | two-component system response regulator GlrR | insig. | 43 | 73 |
| | Escherichia coli ECOR27 | NOLOHH_05465 | zraR | sigma-54-dependent response regulator transcription factor ZraR | insig. | 43 | 75 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_04045 | | Transcriptional regulatory protein ZraR | insig. | 43 | 75 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_18205 | | Fis family transcriptional regulator | insig. | 42 | 73 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_25855 | | DNA-binding response regulator | sig. | 44 | 71 |
| | Dickeya dianthicola 67-19 | HGI48_RS15735 | | two-component system response regulator GlrR | insig. | 43 | 73 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4775 | | Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake | strong | 42 | 73 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_0700 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | insig. | 41 | 77 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS25855 | | sigma-54 dependent transcriptional regulator | strong | 44 | 71 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS58285 | | sigma-54 dependent transcriptional regulator | strong | 44 | 71 |
| | Pseudomonas sp. DMC3 | GFF5115 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 42 | 73 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS04160 | | sigma-54-dependent Fis family transcriptional regulator | sig. | 38 | 76 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS23170 | | ATPase AAA | insig. | 45 | 75 |
| | Pseudomonas sp. BP01 | JOY50_RS14530 | | sigma-54 dependent transcriptional regulator | insig. | 43 | 73 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_0823 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | insig. | 40 | 75 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS09370 | cbrB;inference=COORDINATES | two-component system response regulator CbrB | strong | 42 | 74 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_29980 | | two-component system response regulator CbrB | strong | 42 | 74 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS52660 | cbrB;inference=COORDINATES | two-component system response regulator CbrB | strong | 42 | 74 |
| | Escherichia coli ECRC101 | MCAODC_03820 | zraR | sigma-54-dependent response regulator transcription factor ZraR | insig. | 38 | 98 |
| | Escherichia coli ECRC102 | NIAGMN_11070 | zraR | sigma-54-dependent response regulator transcription factor ZraR | insig. | 38 | 98 |
| | Escherichia coli ECRC99 | KEDOAH_14840 | zraR | sigma-54-dependent response regulator transcription factor ZraR | no data | 38 | 98 |
| | Dechlorosoma suillum PS | Dsui_0135 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | cofit | 41 | 74 |
| | Pseudomonas sp. SVBP6 | COO64_RS15090 | | sigma-54 dependent transcriptional regulator | strong | 43 | 74 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS17060 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 38 | 76 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_1806 | | Nitrogen regulation protein NR(I) | strong | 44 | 71 |
| | Marinobacter adhaerens HP15 | HP15_328 | | two component, sigma54 specific, transcriptional regulator, Fis family | strong | 43 | 74 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS19025 | | sigma-54 dependent transcriptional regulator | strong | 43 | 73 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_06350 | | Fis family transcriptional regulator | strong | 43 | 73 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS53150 | | sigma-54 dependent transcriptional regulator | strong | 43 | 73 |
| | Variovorax sp. OAS795 | ABID97_RS06460 | | sigma 54-interacting transcriptional regulator | cofit | 41 | 73 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS17870 | | Fis family transcriptional regulator | insig. | 37 | 99 |
| | Pseudomonas sp. S08-1 | OH686_17260 | | Two-component sensor CbrB: intrcellular carbon:nitrogen balance | strong | 43 | 75 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2858 | | Two-component sensor CbrB: intrcellular carbon:nitrogen balance | strong | 41 | 75 |
| | Shewanella sp. ANA-3 | Shewana3_2016 | | two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) | insig. | 39 | 74 |
| | Variovorax sp. SCN45 | GFF3669 | | Two-component system response regulator protein | no data | 37 | 100 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_27655 | | two-component system response regulator DctD | strong | 44 | 71 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS50420 | dctD;inference=COORDINATES | two-component system response regulator DctD | strong | 44 | 71 |
| | Pseudomonas sp. DMC3 | GFF5041 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | cofit | 43 | 71 |
| | Pseudomonas putida KT2440 | PP_1401 | | C4-dicarboxylate transport transcriptional regulatory protein | strong | 43 | 73 |
| | Escherichia coli ECRC100 | OKFHMN_13320 | zraR | sigma-54-dependent response regulator transcription factor ZraR | cofit | 37 | 98 |
| | Pseudomonas stutzeri RCH2 | Psest_0999 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | strong | 42 | 75 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF610 | | Putative sensory histidine kinase YfhA | insig. | 42 | 73 |
| | Sinorhizobium meliloti 1021 | SMc01045 | | nitrogen regulation protein | no data | 42 | 75 |
| | Shewanella loihica PV-4 | Shew_2341 | | two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) | insig. | 41 | 71 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS14195 | | sigma-54 dependent transcriptional regulator | insig. | 41 | 74 |
| | Pseudomonas putida KT2440 | PP_4696 | | Nitrogen regulation protein NR(I) | strong | 39 | 80 |
| | Cellulophaga baltica 18 | M666_RS19210 | | sigma-54 dependent transcriptional regulator | insig. | 38 | 75 |
| | Escherichia coli ECRC98 | JDDGAC_16945 | zraR | sigma-54-dependent response regulator transcription factor ZraR | insig. | 37 | 98 |
| | Klebsiella michiganensis M5al | BWI76_RS21250 | | two-component system response regulator GlrR | strong | 42 | 73 |
| | Dechlorosoma suillum PS | Dsui_1758 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | cofit | 42 | 75 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_685 | | Nitrogen regulation protein NR(I) | no data | 41 | 79 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_3913 | | Helix-turn-helix, Fis-type | insig. | 41 | 73 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3913 | | Helix-turn-helix, Fis-type | insig. | 41 | 73 |
| | Pseudomonas sp. DMC3 | GFF4030 | | Transcriptional regulatory protein ZraR | strong | 41 | 74 |
| | Ralstonia solanacearum GMI1000 | RS_RS17240 | | sigma-54-dependent Fis family transcriptional regulator | sig. | 40 | 81 |
| | Rhizobium sp. OAE497 | ABIE40_RS16175 | | sigma-54 dependent transcriptional regulator | strong | 37 | 99 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_0722 | | Two-component response regulator PilR | insig. | 35 | 100 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0722 | | Two-component response regulator PilR | insig. | 35 | 100 |