Homologs of GFF1466 from Sphingobium sp. HT1-2

RNA polymerase sigma-54 factor RpoN
SEED: RNA polymerase sigma-54 factor RpoN
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

250 hits from BLASTp (E < 0.01)

Orth	Species	Gene	Name	Description	Fitness	%Id	Cov
	Sphingobium sp. HT1-2	GFF1466		RNA polymerase sigma-54 factor RpoN	insig.	100	100
o	Sphingomonas koreensis DSMZ 15582	Ga0059261_1191		RNA polymerase sigma factor, sigma-70 family	insig.	62	90
o	Sinorhizobium meliloti 1021	SMa0143		RNA polymerase ECF sigma factor	insig.	46	94
o	Brevundimonas sp. GW460-12-10-14-LB2	A4249_RS02635		RNA polymerase sigma factor	insig.	50	92
o	Rhodanobacter sp000427505 FW510-R12	LRK53_RS09585		RNA polymerase sigma factor	no data	50	85
o	Rhodanobacter sp. FW510-T8	OKGIIK_06725	rpoE	RNA polymerase subunit sigma-70	insig.	50	85
o	Rhodanobacter denitrificans MT42	LRK55_RS00300		RNA polymerase sigma factor	cofit	50	85
	Rhodanobacter denitrificans FW104-10B01	LRK54_RS00565		RNA polymerase sigma factor	insig.	52	74
o	Alteromonas macleodii MIT1002	MIT1002_03872		RNA polymerase sigma factor SigM	insig.	41	95
o	Phaeobacter inhibens DSM 17395	PGA1_78p00070		'RNA polymerase sigma-70, ECF subfamily; ECF26 subgroup'	no data	37	98
	Burkholderia phytofirmans PsJN	BPHYT_RS24740		RNA polymerase subunit sigma-24	sig.	39	98
	Azospirillum brasilense Sp245	AZOBR_RS10625		RNA polymerase sigma-70 factor	insig.	42	91
	Caulobacter crescentus NA1000	CCNA_02977		RNA polymerase ECF-type sigma factor sigU	strong	38	97
	Caulobacter crescentus NA1000 Δfur	CCNA_02977		RNA polymerase ECF-type sigma factor sigU	cofit	38	97
	Paraburkholderia graminis OAS925	ABIE53_006215		RNA polymerase sigma-70 factor (ECF subfamily)	insig.	38	98
	Paraburkholderia bryophila 376MFSha3.1	H281DRAFT_06547		RNA polymerase sigma-70 factor, ECF subfamily	insig.	38	98
o	Agrobacterium fabrum C58	Atu1485		ECF family sigma factor	insig.	37	98
	Paraburkholderia graminis OAS925	ABIE53_002425		RNA polymerase sigma-70 factor (ECF subfamily)	insig.	40	98
	Azospirillum sp. SherDot2	MPMX19_01371		hypothetical protein	insig.	45	89
	Sphingobium sp. HT1-2	GFF5325		RNA polymerase ECF-type sigma factor	cofit	41	93
	Paraburkholderia sabiae LMG 24235	QEN71_RS23005		sigma-70 family RNA polymerase sigma factor	insig.	38	99
	Sphingobium sp. HT1-2	GFF2317		RNA polymerase ECF-type sigma factor	cofit	40	99
	Paraburkholderia bryophila 376MFSha3.1	H281DRAFT_05124		RNA polymerase sigma-70 factor, ECF subfamily	insig.	39	98
	Xanthobacter sp. DMC5	GFF2321		ECF RNA polymerase sigma factor EcfG	no data	38	94
	Paraburkholderia sabiae LMG 24235	QEN71_RS00095		RNA polymerase sigma factor	insig.	36	99
	Burkholderia phytofirmans PsJN	BPHYT_RS08240		RNA polymerase subunit sigma-24	sig.	38	99
	Rhizobium sp. OAE497	ABIE40_RS14450		RNA polymerase sigma factor	insig.	41	99
	Sinorhizobium meliloti 1021	SMc02713		RNA polymerase sigma-E factor (sigma-24) protein	strong	37	98
	Sphingobium sp. HT1-2	GFF4975		RNA polymerase ECF-type sigma factor	cofit	40	96
o	Bacteroides ovatus ATCC 8483	BACOVA_02205		Sigma-70 region 2	sig.	35	99
	Sinorhizobium meliloti 1021	SMc01506		RNA polymerase sigma factor	strong	38	96
	Sphingobium sp. HT1-2	GFF5151		RNA polymerase ECF-type sigma factor	cofit	40	97
	Pseudomonas sp. DMC3	GFF1465		ECF RNA polymerase sigma factor EcfG	insig.	39	96
	Agrobacterium fabrum C58	Atu4160		RNA polymerase sigma factor	strong	40	98
	Paraburkholderia bryophila 376MFSha3.1	H281DRAFT_05041		RNA polymerase sigma-70 factor, ECF subfamily	insig.	40	95
o	Bacteroides thetaiotaomicron VPI-5482	BT2569		RNA polymerase ECF-type sigma factor (NCBI ptt file)	insig.	35	99
	Paraburkholderia graminis OAS925	ABIE53_003943		RNA polymerase sigma-70 factor (ECF subfamily)	sig.	40	95
	Bacteroides thetaiotaomicron VPI-5482	BT3457		RNA polymerase ECF-type sigma factor (NCBI ptt file)	strong	35	99
	Azospirillum sp. SherDot2	MPMX19_01197		ECF RNA polymerase sigma factor EcfG	insig.	34	98
	Cupriavidus basilensis FW507-4G11	RR42_RS32410		RNA polymerase subunit sigma-24	no data	39	98
	Sphingomonas koreensis DSMZ 15582	Ga0059261_3492		RNA polymerase sigma factor, sigma-70 family	strong	38	99
	Mycobacterium tuberculosis H37Rv	Rv3223c		Alternative RNA polymerase sigma-E factor (sigma-24) SigH (RPOE)	insig.	35	99
	Rhodopseudomonas palustris CGA009	TX73_021900		sigma-70 family RNA polymerase sigma factor	strong	39	97
	Agrobacterium fabrum C58	Atu2030		ECF family sigma factor	insig.	42	98
	Azospirillum sp. SherDot2	MPMX19_00764		ECF RNA polymerase sigma factor EcfG	insig.	38	94
	Caulobacter crescentus NA1000	CCNA_03589		RNA polymerase EcfG family sigma factor sigT	strong	37	99
	Caulobacter crescentus NA1000 Δfur	CCNA_03589		RNA polymerase EcfG family sigma factor sigT	cofit	37	99
	Pontibacter actiniarum KMM 6156, DSM 19842	CA264_19215		RNA polymerase subunit sigma	sig.	35	99
	Bacteroides ovatus ATCC 8483	BACOVA_01848		Sigma-70 region 2	strong	34	99
	Pseudomonas fluorescens FW300-N1B4	Pf1N1B4_3977		RNA polymerase sigma-54 factor RpoN	insig.	40	91
	Azospirillum sp. SherDot2	MPMX19_05043		hypothetical protein	insig.	39	86
	Bosea sp. OAE506	ABIE41_RS04095		sigma-70 family RNA polymerase sigma factor	strong	38	96
	Sphingomonas koreensis DSMZ 15582	Ga0059261_3853		RNA polymerase sigma factor, sigma-70 family	insig.	37	98
	Azospirillum brasilense Sp245	AZOBR_RS14755		RNA polymerase sigma-70 factor	insig.	32	98
	Paraburkholderia graminis OAS925	ABIE53_003919		RNA polymerase sigma-70 factor (ECF subfamily)	insig.	38	91
	Azospirillum brasilense Sp245	AZOBR_RS06360		RNA polymerase subunit sigma-24	no data	36	94
	Magnetospirillum magneticum AMB-1	AMB_RS13315		hypothetical protein	insig.	39	99
	Pseudomonas sp. SVBP6	COO64_RS10855		sigma-70 family RNA polymerase sigma factor	insig.	43	91
	Rhizobium sp. OAE497	ABIE40_RS11455		RNA polymerase sigma factor	insig.	39	96
	Pseudomonas fluorescens GW456-L13	PfGW456L13_2582		RNA polymerase sigma-54 factor RpoN	insig.	41	91
	Rhizobium sp. OAE497	ABIE40_RS03400		RNA polymerase sigma factor	insig.	40	82
	Rhizobium sp. OAE497	ABIE40_RS20320		sigma-70 family RNA polymerase sigma factor	insig.	39	94
	Pseudomonas fluorescens FW300-N2E3	AO353_20305		RNA polymerase subunit sigma-24	no data	39	91
	Brevundimonas sp. GW460-12-10-14-LB2	A4249_RS14775		sigma-70 family RNA polymerase sigma factor	strong	37	94
o	Bacteroides stercoris CC31F	HMPREF1181_RS16950		RNA polymerase sigma factor	strong	34	98
	Rhizobium sp. OAE497	ABIE40_RS13310		RNA polymerase sigma factor	insig.	37	93
o	Pseudomonas protegens RBAN4	FABNJH_20415		RNA polymerase sigma factor	insig.	39	96
	Pseudomonas fluorescens FW300-N2E2	Pf6N2E2_2200		RNA polymerase sigma-54 factor RpoN	sig.	36	96
	Pectobacterium carotovorum WPP14	HER17_RS09715		sigma-70 family RNA polymerase sigma factor	cofit	35	93
	Enterobacter asburiae PDN3	EX28DRAFT_2729		RNA polymerase sigma factor, sigma-70 family	insig.	37	93
	Rhizobium sp. OAE497	ABIE40_RS21790		sigma-70 family RNA polymerase sigma factor	cofit	36	99
	Rhodospirillum rubrum S1H	Rru_A3287		Sigma-24 (FecI) (NCBI)	no data	36	99
	Sinorhizobium meliloti 1021	SM_b21484		RNA polymerase sigma-E factor (sigma-24) protein	insig.	35	94
o	Phocaeicola dorei CL03T12C01	ABI39_RS07815		RNA polymerase sigma factor	strong	34	95
	Herbaspirillum seropedicae SmR1	HSERO_RS13530		RNA polymerase subunit sigma-24	no data	44	90
	Pseudomonas fluorescens SBW25	PFLU_RS19010		sigma-70 family RNA polymerase sigma factor	insig.	39	91
	Pseudomonas fluorescens SBW25-INTG	PFLU_RS19010		sigma-70 family RNA polymerase sigma factor	sig.	39	91
	Sphingobium sp. HT1-2	GFF2028		hypothetical protein	cofit	38	90
	Rhizobium sp. OAE497	ABIE40_RS27415		sigma-70 family RNA polymerase sigma factor	insig.	33	98
o	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS12805		RNA polymerase sigma factor	strong	33	95
	Pseudomonas orientalis W4I3	QF045_RS18740		sigma-70 family RNA polymerase sigma factor	insig.	39	91
	Phocaeicola dorei CL03T12C01	ABI39_RS17450		RNA polymerase sigma factor	strong	33	95
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS03770		RNA polymerase sigma factor	strong	33	95
	Pseudomonas fluorescens FW300-N2C3	AO356_01625		RNA polymerase subunit sigma-24	insig.	35	96
	Sinorhizobium meliloti 1021	SMc01419		RNA polymerase sigma factor protein	sig.	34	95
	Bacteroides stercoris CC31F	HMPREF1181_RS02840		RNA polymerase sigma factor	sig.	32	95
	Azospirillum brasilense Sp245	AZOBR_RS23735		RNA polymerase	no data	38	87
o	Serratia liquefaciens MT49	IAI46_22980		RNA polymerase sigma factor	insig.	38	83
	Dinoroseobacter shibae DFL-12	Dshi_3835		RNA polymerase, sigma-24 subunit, ECF subfamily (RefSeq)	insig.	35	94
	Bacteroides thetaiotaomicron VPI-5482	BT1197		RNA polymerase ECF-type sigma factor (NCBI ptt file)	strong	33	95
	Pseudomonas lactucae CFBP13502	GEMAOFIL_03722		ECF RNA polymerase sigma factor EcfG	no data	39	91
	Pantoea sp. MT58	IAI47_21640		sigma-70 family RNA polymerase sigma factor	insig.	37	83
	Variovorax sp. OAS795	ABID97_RS16445		sigma-70 family RNA polymerase sigma factor	no data	37	94
	Dickeya dadantii 3937	DDA3937_RS11055		sigma-70 family RNA polymerase sigma factor	insig.	36	93
	Dickeya dianthicola 67-19	HGI48_RS11075		sigma-70 family RNA polymerase sigma factor	insig.	36	93
	Azospirillum brasilense Sp245	AZOBR_RS11020		RNA polymerase subunit sigma-70	no data	37	88
	Mycobacterium tuberculosis H37Rv	Rv1221		Alternative RNA polymerase sigma factor SigE	insig.	38	90
	Pseudomonas putida KT2440	PP_2888		putative ECF sigma factor PrtI	no data	40	91
	Pseudomonas sp. BP01	JOY50_RS05860		sigma-70 family RNA polymerase sigma factor	no data	40	91
	Bacteroides ovatus ATCC 8483	BACOVA_03979		Sigma-70 region 2	strong	33	95
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_0287		RNA polymerase sigma factor, sigma-70 family	strong	30	99
	Paraburkholderia sabiae LMG 24235	QEN71_RS36705		RNA polymerase sigma factor	insig.	40	94
	Enterobacter sp. TBS_079	MPMX20_03520		ECF RNA polymerase sigma factor EcfG	insig.	37	87
	Pseudomonas simiae WCS417	PS417_17070		RNA polymerase subunit sigma-24	insig.	37	90
	Azospirillum sp. SherDot2	MPMX19_00923		hypothetical protein	insig.	37	96
	Pseudomonas sp. RS175	PFR28_01251		ECF RNA polymerase sigma factor EcfG	insig.	35	96
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS24230		RNA polymerase sigma factor	strong	30	90
	Paraburkholderia bryophila 376MFSha3.1	H281DRAFT_05043		RNA polymerase sigma-70 factor, ECF subfamily	no data	37	91
	Paraburkholderia sabiae LMG 24235	QEN71_RS32245		RNA polymerase sigma factor	insig.	35	93
	Dechlorosoma suillum PS	Dsui_1302		RNA polymerase sigma factor, sigma-70 family	cofit	40	96
	Paraburkholderia bryophila 376MFSha3.1	H281DRAFT_01554		RNA polymerase sigma-70 factor, ECF subfamily	insig.	35	90
	Sphingobium sp. HT1-2	GFF4551		hypothetical protein	cofit	38	95
	Sphingomonas koreensis DSMZ 15582	Ga0059261_3411		RNA polymerase sigma factor, sigma-70 family	insig.	35	87
	Variovorax sp. SCN45	GFF215		RNA polymerase sigma-54 factor RpoN	insig.	34	95
	Hydrogenophaga sp. GW460-11-11-14-LB1	GFF4350		RNA polymerase sigma-54 factor RpoN	insig.	38	97
o	Kangiella aquimarina DSM 16071	B158DRAFT_0015		RNA polymerase sigma factor, sigma-70 family	insig.	38	88
	Rahnella sp. WP5	EX31_RS05375		sigma-70 family RNA polymerase sigma factor	insig.	34	97
	Rhizobium sp. OAE497	ABIE40_RS22730		RNA polymerase sigma factor	insig.	40	92
	Ralstonia solanacearum IBSBF1503	RALBFv3_RS07010		RNA polymerase sigma factor	no data	38	90
	Ralstonia solanacearum UW163	UW163_RS06605		RNA polymerase sigma factor	no data	38	90
	Pantoea agglomerans CFBP13505 P0401	PagCFBP13516_RS22400		sigma-70 family RNA polymerase sigma factor	cofit	36	77
	Herbaspirillum seropedicae SmR1	HSERO_RS09625		RNA polymerase sigma factor RpoE	no data	34	97
	Ralstonia sp. UNC404CL21Col	ABZR87_RS10165		RNA polymerase sigma factor RpoE	strong	33	97
	Ralstonia solanacearum IBSBF1503	RALBFv3_RS14445		RNA polymerase sigma factor RpoE	strong	33	97
	Ralstonia solanacearum GMI1000	RS_RS05225		RNA polymerase sigma factor RpoE	strong	33	97
	Ralstonia solanacearum PSI07	RPSI07_RS19015		RNA polymerase sigma factor RpoE	strong	33	97
	Ralstonia solanacearum UW163	UW163_RS11910		RNA polymerase sigma factor RpoE	insig.	33	97
	Phaeobacter inhibens DSM 17395	PGA1_c27070		RNA polymerase sigma factor 70 (ECF15 subgroup, ECF26 subgroup)	insig.	34	98
	Pontibacter actiniarum KMM 6156, DSM 19842	CA264_10915		RNA polymerase subunit sigma	strong	29	98
	Bacteroides thetaiotaomicron VPI-5482	BT2383		RNA polymerase ECF-type sigma factor (NCBI ptt file)	insig.	32	99
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS11995		RNA polymerase subunit sigma	insig.	29	97
	Ralstonia solanacearum PSI07	RPSI07_RS10230		RNA polymerase sigma factor	no data	37	90
	Hydrogenophaga sp. GW460-11-11-14-LB1	GFF329		RNA polymerase sigma-54 factor RpoN	insig.	35	95
	Sinorhizobium meliloti 1021	SMc04051		RNA polymerase sigma-E factor (sigma-24) protein	insig.	32	98
	Mucilaginibacter yixingensis YX-36 DSM 26809	ABZR88_RS16550		RNA polymerase sigma factor	strong	29	87
	Bacteroides ovatus ATCC 8483	BACOVA_04312		Sigma-70 region 2	insig.	29	100
	Pseudomonas stutzeri RCH2	Psest_3456		RNA polymerase sigma factor, sigma-70 family	insig.	39	78
	Ralstonia solanacearum GMI1000	RS_RS14950		RNA polymerase sigma factor	no data	36	90
	Cupriavidus basilensis FW507-4G11	RR42_RS19070		DNA-directed RNA polymerase sigma-70 factor	insig.	39	92
	Caulobacter crescentus NA1000	CCNA_02837		RNA polymerase ECF-type sigma factor	insig.	35	89
	Caulobacter crescentus NA1000 Δfur	CCNA_02837		RNA polymerase ECF-type sigma factor	cofit	35	89
	Bacteroides thetaiotaomicron VPI-5482	BT1572		RNA polymerase ECF-type sigma factor (NCBI ptt file)	insig.	28	100
	Cupriavidus basilensis FW507-4G11	RR42_RS14080		RNA polymerase sigma factor RpoE	strong	32	97
	Brevundimonas sp. GW460-12-10-14-LB2	A4249_RS10790		RNA polymerase sigma factor	insig.	36	89
	Ralstonia sp. UNC404CL21Col	ABZR87_RS02660		RNA polymerase sigma factor	insig.	35	90
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_1476		RNA polymerase sigma factor, sigma-70 family	insig.	29	87
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS05410		RNA polymerase sigma factor	strong	26	99
	Burkholderia phytofirmans PsJN	BPHYT_RS14405		RNA polymerase sigma factor RpoE	no data	33	94
	Paraburkholderia graminis OAS925	ABIE53_003043		RNA polymerase sigma-70 factor (ECF subfamily)	strong	33	94
	Castellaniella sp019104865 MT123	ABCV34_RS08355		RNA polymerase sigma factor RpoE	strong	32	92
	Burkholderia phytofirmans PsJN	BPHYT_RS08845		RNA polymerase sigma factor	insig.	34	86
	Paraburkholderia bryophila 376MFSha3.1	H281DRAFT_04355		RNA polymerase, sigma-24 subunit, RpoE	no data	33	94
	Paraburkholderia bryophila 376MFSha3.1	H281DRAFT_01799		RNA polymerase sigma-70 factor, ECF subfamily	insig.	35	97
	Paraburkholderia sabiae LMG 24235	QEN71_RS04575		RNA polymerase sigma factor RpoE	strong	33	88
	Bifidobacterium breve UCC2003	BBR_RS16820		RNA polymerase sigma factor RpoE	strong	28	99
	Dechlorosoma suillum PS	Dsui_2453		RNA polymerase sigma factor RpoE	no data	35	88
	Paraburkholderia graminis OAS925	ABIE53_002003		RNA polymerase sigma factor (sigma-70 family)	sig.	33	86
	Bacteroides thetaiotaomicron VPI-5482	BT3396		RNA polymerase ECF-type sigma factor (NCBI ptt file)	strong	27	95
	Agrobacterium fabrum C58	Atu5490		ECF family RNA polymerase sigma factor	insig.	31	88
	Bacteroides ovatus ATCC 8483	BACOVA_01909		Sigma-70 region 2	sig.	26	95
	Cupriavidus basilensis FW507-4G11	RR42_RS05810		RNA polymerase sigma factor	insig.	33	91
	Agrobacterium fabrum C58	Atu3084		RNA polymerase sigma factor	insig.	32	94
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS11895		hypothetical protein	insig.	30	83
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS16675		hypothetical protein	insig.	25	98
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS15765		RNA polymerase sigma factor	strong	25	99
	Rhizobium sp. OAE497	ABIE40_RS26955		sigma-70 family RNA polymerase sigma factor	insig.	30	90
	Burkholderia phytofirmans PsJN	BPHYT_RS24975		RNA polymerase sigma24 factor	strong	34	89
	Bacteroides stercoris CC31F	HMPREF1181_RS02545		sigma-70 family RNA polymerase sigma factor	insig.	30	93
	Pseudomonas fluorescens GW456-L13	PfGW456L13_2959		RNA polymerase sigma-54 factor RpoN	insig.	35	58
	Marinobacter adhaerens HP15	HP15_342		RNA polymerase sigma factor SigE	insig.	30	86
	Variovorax sp. SCN45	GFF3863		RNA polymerase sigma factor RpoE	insig.	28	94
	Cupriavidus basilensis FW507-4G11	RR42_RS16520		RNA polymerase sigma factor	insig.	32	97
	Variovorax sp. OAS795	ABID97_RS08330		RNA polymerase sigma factor RpoE	strong	28	94
	Rhizobium sp. OAE497	ABIE40_RS15675		sigma-70 family RNA polymerase sigma factor	insig.	30	96
	Rhodospirillum rubrum S1H	Rru_A2537		Sigma-24 (FecI) (NCBI)	insig.	32	83
	Pantoea sp. MT58	IAI47_04850		RNA polymerase sigma factor RpoE	no data	31	79
	Bacteroides ovatus ATCC 8483	BACOVA_03939		Sigma-70 region 2	insig.	29	96
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS12270		RNA polymerase subunit sigma	insig.	28	91
	Rhodopseudomonas palustris CGA009	TX73_023085		RNA polymerase sigma factor	cofit	36	89
	Pseudomonas stutzeri RCH2	Psest_3100		RNA polymerase sigma factor RpoE	strong	28	95
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_0726		RNA polymerase sigma factor, sigma-70 family	insig.	29	97
	Escherichia coli BL21	ECD_02467		RNA polymerase sigma E factor	no data	33	79
	Escherichia fergusonii Becca	EFB2_01323		ECF RNA polymerase sigma-E factor	no data	33	79
	Escherichia coli ECOR27	NOLOHH_13050	rpoE	RNA polymerase sigma factor RpoE	no data	33	79
	Escherichia coli ECOR38	HEPCGN_20520	rpoE	RNA polymerase sigma factor RpoE	no data	33	79
	Escherichia coli ECRC100	OKFHMN_21375	rpoE	RNA polymerase sigma factor RpoE	no data	33	79
	Escherichia coli ECRC101	MCAODC_11905	rpoE	RNA polymerase sigma factor RpoE	no data	33	79
	Escherichia coli ECRC102	NIAGMN_19145	rpoE	RNA polymerase sigma factor RpoE	no data	33	79
	Escherichia coli ECRC62	BNILDI_11850	rpoE	RNA polymerase sigma factor RpoE	no data	33	79
	Escherichia coli ECRC98	JDDGAC_25040	rpoE	RNA polymerase sigma factor RpoE	no data	33	79
	Escherichia coli ECRC99	KEDOAH_06845	rpoE	RNA polymerase sigma factor RpoE	no data	33	79
	Escherichia coli HS(pFamp)R (ATCC 700891)	OHPLBJKB_01134		ECF RNA polymerase sigma-E factor	no data	33	79
	Escherichia coli Nissle 1917	ECOLIN_RS14560		RNA polymerase sigma factor RpoE	no data	33	79
	Escherichia coli BW25113	b2573	rpoE	RNA polymerase, sigma 24 (sigma E) factor (NCBI)	no data	33	79
	Phaeobacter inhibens DSM 17395	PGA1_c08510		RNA polymerase sigma factor (ECF01 subgroup, ECF20 subgroup)	insig.	32	92
	Pseudomonas sp. S08-1	OH686_20045		RNA polymerase sigma factor RpoE	strong	31	81
	Pseudomonas syringae pv. syringae B728a	Psyr_3958		RNA polymerase, sigma-24 subunit, RpoE	strong	26	95
	Pseudomonas syringae pv. syringae B728a ΔmexB	Psyr_3958		RNA polymerase, sigma-24 subunit, RpoE	strong	26	95
	Bacteroides ovatus ATCC 8483	BACOVA_02602		Sigma-70 region 2	cofit	41	43
	Variovorax sp. SCN45	GFF4544		RNA polymerase sigma factor RpoE	insig.	31	92
	Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868	GFF2107		RNA polymerase sigma factor RpoE	no data	33	79
	Pseudomonas segetis P6	ACVTMO_RS06940	rpoE	RNA polymerase sigma factor RpoE	strong	27	95
	Acidovorax sp. GW101-3H11	Ac3H11_1573		RNA polymerase sigma factor RpoE	no data	30	88
	Rahnella sp. WP5	EX31_RS21800		RNA polymerase sigma factor RpoE	no data	32	80
	Pantoea agglomerans CFBP13505 P0401	PagCFBP13516_RS05140	rpoE	RNA polymerase sigma factor RpoE	no data	31	79
	Pseudomonas aeruginosa MRSN321	DY961_RS08690	rpoE;go_component=cytoplasm|0005737||IEA;go_function=sigma	RNA polymerase sigma factor RpoE	strong	27	95
	Pseudomonas aeruginosa PA14	IKLFDK_03265		alginate biosynthesis protein AlgZ/FimS	strong	27	95
	Pseudomonas aeruginosa PUPa3	DQ20_RS44160	rpoE;go_component=cytoplasm|0005737||IEA;go_function=sigma	RNA polymerase sigma factor RpoE	strong	27	95
	Pseudomonas fluorescens SBW25	PFLU_RS07230		RNA polymerase sigma factor RpoE	sig.	26	95
	Pseudomonas fluorescens SBW25-INTG	PFLU_RS07230		RNA polymerase sigma factor RpoE	strong	26	95
	Pseudomonas sp. DMC3	GFF2277		RNA polymerase sigma-H factor	cofit	26	95
	Pseudomonas lactucae CFBP13502	GEMAOFIL_01572		RNA polymerase sigma-H factor	cofit	26	95
	Pseudomonas sp. RS175	PFR28_00690		RNA polymerase sigma-H factor	strong	26	95
	Pseudomonas orientalis W4I3	QF045_RS09835		RNA polymerase sigma factor RpoE	cofit	26	95
	Pseudomonas simiae WCS417	PS417_07120		RNA polymerase sigma-H factor	strong	26	95
	Pseudomonas fluorescens GW456-L13	PfGW456L13_4516		RNA polymerase sigma-H factor AlgT	sig.	26	95
	Pseudomonas fluorescens FW300-N1B4	Pf1N1B4_3323		RNA polymerase sigma-H factor AlgT	no data	26	95
	Pseudomonas fluorescens FW300-N2C3	AO356_04575		RNA polymerase subunit sigma	strong	26	95
	Pseudomonas fluorescens FW300-N2E2	Pf6N2E2_2756		RNA polymerase sigma-H factor AlgT	strong	26	95
	Pseudomonas protegens RBAN4	FABNJH_07555	algU	alginate biosynthesis protein AlgZ/FimS	insig.	26	95
	Pseudomonas sp. SVBP6	COO64_RS16525	rpoE	RNA polymerase sigma factor RpoE	insig.	26	95
	Pseudomonas fluorescens FW300-N2E3	AO353_17625		RNA polymerase subunit sigma	strong	26	95
	Ralstonia solanacearum IBSBF1503	RALBFv3_RS23375		RNA polymerase sigma factor	insig.	35	94
	Ralstonia solanacearum UW163	UW163_RS16625		RNA polymerase sigma factor	insig.	35	94
	Klebsiella pneumoniae MKP103	KDGMDA_28480		RNA polymerase sigma factor RpoE	no data	33	79
	Klebsiella pneumoniae MRSN742743	KFA93_RS04695	rpoE;go_function=DNA	RNA polymerase sigma factor RpoE	no data	33	79
	Paraburkholderia graminis OAS925	ABIE53_005321		RNA polymerase sigma factor (sigma-70 family)	sig.	31	89
	Enterobacter asburiae PDN3	EX28DRAFT_0072		RNA polymerase sigma factor RpoE	no data	31	79
	Enterobacter sp. TBS_079	MPMX20_03444		ECF RNA polymerase sigma-E factor	no data	31	79
	Erwinia amylovora T8	OLJFJH_10215		RNA polymerase sigma factor RpoE	strong	30	79
	Pseudomonas sp. BP01	JOY50_RS14665	rpoE	RNA polymerase sigma factor RpoE	insig.	28	95
	Pseudomonas putida KT2440	PP_1427		RNA polymerase sigma E factor	sig.	28	95
	Methylophilus sp. DMC18	GFF2730		RNA polymerase sigma-H factor	no data	28	88
	Shewanella oneidensis MR-1	SO1342	rpoE	RNA polymerase sigma-24 factor (NCBI ptt file)	no data	28	95
	Ralstonia sp. UNC404CL21Col	ABZR87_RS23395		RNA polymerase sigma factor	insig.	32	94
	Serratia liquefaciens MT49	IAI46_19585		RNA polymerase sigma factor RpoE	no data	30	80
	Synechococcus elongatus PCC 7942	Synpcc7942_1923	sigG	RNA polymerase sigma factor RpoE	strong	32	90
	Castellaniella sp019104865 MT123	ABCV34_RS11175		sigma-70 family RNA polymerase sigma factor	insig.	31	73
	Marinobacter adhaerens HP15	HP15_775		RNA polymerase sigma-70 RpoE type	insig.	29	85
	Shewanella sp. ANA-3	Shewana3_3032		RNA polymerase sigma factor RpoE (RefSeq)	no data	28	95
	Ralstonia solanacearum PSI07	RPSI07_RS07750		RNA polymerase sigma factor	insig.	35	94
	Pseudomonas simiae WCS417	PS417_11995		RNA polymerase sigma factor	insig.	34	94
	Paraburkholderia sabiae LMG 24235	QEN71_RS22515		RNA polymerase sigma factor	insig.	30	98
	Hydrogenophaga sp. GW460-11-11-14-LB1	GFF3339		RNA polymerase sigma factor RpoE	cofit	29	94
	Xanthomonas campestris pv. campestris strain 8004	Xcc-8004.3681.1		RNA polymerase sigma factor RpoE	insig.	31	83
	Ralstonia solanacearum GMI1000	RS_RS25030		RNA polymerase sigma factor	insig.	34	93
	Pectobacterium carotovorum WPP14	HER17_RS05780		RNA polymerase sigma factor RpoE	no data	29	80
	Paraburkholderia bryophila 376MFSha3.1	H281DRAFT_02732		RNA polymerase sigma-70 factor, ECF subfamily	insig.	30	89
	Erwinia tracheiphila HP pepo 2.2	IJEDHG_01235	rpoE	RNA polymerase sigma factor RpoE	strong	30	79
	Bacteroides ovatus ATCC 8483	BACOVA_00669		Sigma-70 region 2	insig.	28	91