Homologs of GFF1264 from Variovorax sp. SCN45

Transcriptional regulator, Xre family
SEED: Predicted transcriptional regulators

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF1264 Transcriptional regulator, Xre family insig. 100 100
o Acidovorax sp. GW101-3H11 Ac3H11_4306 Predicted transcriptional regulators insig. 58 100
o Herbaspirillum seropedicae SmR1 HSERO_RS11685 transcription factor no data 55 98
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01814 transcriptional regulator, XRE family with cupin sensor insig. 42 82
  Ralstonia solanacearum GMI1000 RS_RS05775 XRE family transcriptional regulator insig. 49 60
  Ralstonia solanacearum PSI07 RPSI07_RS18415 XRE family transcriptional regulator insig. 49 60
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS01775 helix-turn-helix transcriptional regulator no data 47 64
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3490 Predicted transcriptional regulators no data 41 76
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS14960 XRE family transcriptional regulator insig. 47 60
  Ralstonia solanacearum UW163 UW163_RS12430 XRE family transcriptional regulator no data 47 60
  Desulfovibrio vulgaris Miyazaki F DvMF_0794 transcriptional regulator, XRE family (RefSeq) strong 45 62
  Dickeya dadantii 3937 DDA3937_RS07775 helix-turn-helix transcriptional regulator insig. 42 78
  Paraburkholderia sabiae LMG 24235 QEN71_RS33370 XRE family transcriptional regulator insig. 42 82
  Paraburkholderia sabiae LMG 24235 QEN71_RS16640 XRE family transcriptional regulator insig. 43 73
  Rhodopseudomonas palustris CGA009 TX73_013495 XRE family transcriptional regulator insig. 37 84
  Castellaniella sp019104865 MT123 ABCV34_RS15905 helix-turn-helix transcriptional regulator no data 39 84
  Enterobacter asburiae PDN3 EX28DRAFT_1040 Cupin domain/Helix-turn-helix insig. 39 81
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS20215 transcriptional regulator insig. 45 62
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS05870 helix-turn-helix domain-containing protein cofit 35 71
  Herbaspirillum seropedicae SmR1 HSERO_RS00085 transcriptional regulator insig. 43 67
  Serratia liquefaciens MT49 IAI46_16830 helix-turn-helix transcriptional regulator insig. 38 83
  Ralstonia solanacearum GMI1000 RS_RS11670 XRE family transcriptional regulator insig. 32 85
  Klebsiella michiganensis M5al BWI76_RS13480 XRE family transcriptional regulator sig. 43 71
  Enterobacter sp. TBS_079 MPMX20_02411 hypothetical protein insig. 41 71
  Rhizobium sp. OAE497 ABIE40_RS24480 XRE family transcriptional regulator cofit 38 78
  Pantoea sp. MT58 IAI47_10265 helix-turn-helix domain-containing protein insig. 35 71
  Shewanella sp. ANA-3 Shewana3_3803 XRE family transcriptional regulator (RefSeq) cofit 43 67
  Dechlorosoma suillum PS Dsui_2833 putative transcriptional regulator insig. 43 67
  Ralstonia solanacearum PSI07 RPSI07_RS25065 XRE family transcriptional regulator insig. 38 78
  Klebsiella pneumoniae MKP103 KDGMDA_23030 LacI family transcriptional regulator insig. 41 71
  Rhodanobacter denitrificans MT42 LRK55_RS10465 helix-turn-helix transcriptional regulator cofit 44 72
  Xanthobacter sp. DMC5 GFF2607 hypothetical protein insig. 39 66
  Shewanella sp. ANA-3 Shewana3_0319 XRE family transcriptional regulator (RefSeq) strong 37 64
  Burkholderia phytofirmans PsJN BPHYT_RS35975 Xre family transcriptional regulator insig. 41 63
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS01430 helix-turn-helix transcriptional regulator no data 49 55
  Cupriavidus basilensis FW507-4G11 RR42_RS05700 hypothetical protein insig. 44 62
  Shewanella oneidensis MR-1 SO3867 transcriptional regulator, Cro/CI family (NCBI ptt file) insig. 39 66
  Serratia liquefaciens MT49 IAI46_11440 helix-turn-helix transcriptional regulator cofit 33 79
  Escherichia fergusonii Becca EFB2_02548 HTH-type transcriptional regulator SutR insig. 31 75
  Ralstonia sp. UNC404CL21Col ABZR87_RS06145 XRE family transcriptional regulator insig. 39 63
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2584 Predicted transcriptional regulators insig. 39 64
  Escherichia coli BL21 ECD_01392 putative DNA-binding transcriptional regulator no data 38 58
  Escherichia coli ECOR27 NOLOHH_19280 sutR DNA-binding transcriptional regulator SutR insig. 38 58
  Escherichia coli ECRC62 BNILDI_17730 sutR DNA-binding transcriptional regulator SutR insig. 38 58
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02281 HTH-type transcriptional regulator SutR insig. 38 58
  Escherichia coli BW25113 b1434 ydcN predicted DNA-binding transcriptional regulator (NCBI) insig. 38 58
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS23980 XRE family transcriptional regulator insig. 38 69
  Escherichia coli ECRC100 OKFHMN_01605 sutR DNA-binding transcriptional regulator SutR insig. 37 61
  Escherichia coli ECRC101 MCAODC_16335 sutR DNA-binding transcriptional regulator SutR insig. 37 61
  Escherichia coli ECRC102 NIAGMN_25740 sutR DNA-binding transcriptional regulator SutR no data 37 61
  Escherichia coli ECRC98 JDDGAC_04095 sutR DNA-binding transcriptional regulator SutR insig. 37 61
  Escherichia coli ECRC99 KEDOAH_26835 sutR DNA-binding transcriptional regulator SutR no data 37 61
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2595 Transcriptional regulator yidN, Cro/CI family insig. 35 71
  Pseudomonas simiae WCS417 PS417_09820 Cro/Cl family transcriptional regulator no data 53 51
  Cellulophaga baltica 18 M666_RS06305 helix-turn-helix transcriptional regulator insig. 38 74
  Methanococcus maripaludis JJ MMJJ_RS02070 XRE family transcriptional regulator insig. 38 72
  Escherichia coli ECOR38 HEPCGN_26215 sutR DNA-binding transcriptional regulator SutR insig. 37 61
  Escherichia coli Nissle 1917 ECOLIN_RS08275 DNA-binding transcriptional regulator SutR no data 37 61
  Pseudomonas sp. S08-1 OH686_23020 Transcriptional regulator, Xre family insig. 41 72
  Pseudomonas aeruginosa PA14 IKLFDK_12720 transcriptional regulator insig. 34 76
  Klebsiella pneumoniae MKP103 KDGMDA_23150 XRE family transcriptional regulator insig. 30 72
  Pectobacterium carotovorum WPP14 HER17_RS21700 XRE family transcriptional regulator cofit 38 60
  Cupriavidus basilensis FW507-4G11 RR42_RS21695 DNA-binding protein sig. 39 78
  Phocaeicola dorei CL03T12C01 ABI39_RS13480 helix-turn-helix transcriptional regulator insig. 37 71
  Enterobacter asburiae PDN3 EX28DRAFT_1223 Cupin domain/Helix-turn-helix insig. 31 66
  Rahnella sp. WP5 EX31_RS05710 helix-turn-helix transcriptional regulator insig. 28 75
  Acidovorax sp. GW101-3H11 Ac3H11_1308 Transcriptional regulator no data 39 63
  Rhodopseudomonas palustris CGA009 TX73_011590 helix-turn-helix transcriptional regulator insig. 36 72
  Cupriavidus basilensis FW507-4G11 RR42_RS29790 hypothetical protein insig. 35 81
  Shewanella oneidensis MR-1 SO1265 transcriptional regulator, putative (NCBI ptt file) strong 32 74
  Pseudomonas aeruginosa MRSN321 DY961_RS27855 helix-turn-helix transcriptional regulator sig. 46 56
  Pseudomonas aeruginosa PA14 IKLFDK_21015 transcriptional regulator insig. 46 56
  Pseudomonas aeruginosa PUPa3 DQ20_RS47795 helix-turn-helix transcriptional regulator sig. 46 56
  Pseudomonas fluorescens FW300-N2C3 AO356_06745 DNA-binding protein sig. 38 62
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3201 Transcriptional regulator, MerR family strong 38 62
  Magnetospirillum magneticum AMB-1 AMB_RS02475 XRE family transcriptional regulator insig. 37 67
  Shewanella oneidensis MR-1 SOA0002 type II restriction-modification system activator, putative (NCBI ptt file) strong 35 74
  Desulfovibrio vulgaris Hildenborough JW710 DVU3066 DNA-binding protein (TIGR) sig. 34 85
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1294.1 hypothetical protein insig. 33 74
  Azospirillum sp. SherDot2 MPMX19_02581 HTH-type transcriptional regulator SutR insig. 30 85
  Variovorax sp. OAS795 ABID97_RS06760 XRE family transcriptional regulator insig. 39 78
  Ralstonia solanacearum PSI07 RPSI07_RS22035 XRE family transcriptional regulator insig. 38 67
  Ralstonia sp. UNC404CL21Col ABZR87_RS07155 helix-turn-helix transcriptional regulator insig. 37 64
  Shewanella sp. ANA-3 Shewana3_3100 XRE family transcriptional regulator (RefSeq) strong 33 69
  Pseudomonas sp. S08-1 OH686_13700 Putrescine utilization regulator strong 32 87
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5451 hypothetical protein insig. 42 60
  Paraburkholderia sabiae LMG 24235 QEN71_RS33920 XRE family transcriptional regulator strong 38 79
  Ralstonia solanacearum GMI1000 RS_RS15735 XRE family transcriptional regulator insig. 38 63
  Variovorax sp. SCN45 GFF5178 Transcriptional regulator, Xre-family with cupin domain insig. 37 80
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS07920 XRE family transcriptional regulator cofit 34 88
  Ralstonia solanacearum UW163 UW163_RS05705 XRE family transcriptional regulator sig. 34 88
  Pseudomonas segetis P6 ACVTMO_RS00025 cupin domain-containing protein strong 31 87
  Rhodanobacter denitrificans MT42 LRK55_RS06710 helix-turn-helix transcriptional regulator cofit 43 55
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS06970 helix-turn-helix transcriptional regulator sig. 43 55
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS21935 helix-turn-helix domain-containing protein sig. 39 61
  Shewanella loihica PV-4 Shew_3490 XRE family transcriptional regulator (RefSeq) insig. 36 75
  Serratia liquefaciens MT49 IAI46_10550 HTH-type transcriptional regulator PuuR insig. 34 79
  Phaeobacter inhibens DSM 17395 PGA1_c14960 putative transcriptional regulator sig. 32 74
  Enterobacter sp. TBS_079 MPMX20_02243 HTH-type transcriptional regulator SutR insig. 30 71
  Pseudomonas sp. DMC3 GFF1048 HTH-type transcriptional regulator SutR no data 42 60