Homologs of CSW01_12700 from Vibrio cholerae E7946 ATCC 55056

RNA pseudouridine synthase
SEED: Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)
KEGG: ribosomal large subunit pseudouridine synthase A

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Vibrio cholerae E7946 ATCC 55056 CSW01_12700 RNA pseudouridine synthase insig. 100 100
o Rahnella sp. WP5 EX31_RS03750 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 59 82
o Klebsiella michiganensis M5al BWI76_RS04565 bifunctional tRNA pseudouridine(32) synthase/ribosomal large subunit pseudouridine synthase RluA sig. 57 89
o Klebsiella pneumoniae MKP103 KDGMDA_12790 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 57 89
o Enterobacter asburiae PDN3 EX28DRAFT_3650 pseudouridine synthase, RluA family insig. 57 89
o Pectobacterium carotovorum WPP14 HER17_RS02985 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA cofit 59 82
o Enterobacter sp. TBS_079 MPMX20_00752 Dual-specificity RNA pseudouridine synthase RluA insig. 56 89
o Dickeya dadantii 3937 DDA3937_RS18240 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 58 82
o Shewanella loihica PV-4 Shew_0783 pseudouridylate synthase (RefSeq) no data 52 90
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF184 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) cofit 56 89
o Dickeya dianthicola 67-19 HGI48_RS18175 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 57 82
o Dickeya dianthicola ME23 DZA65_RS19315 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 57 82
o Shewanella amazonensis SB2B Sama_0606 pseudouridylate synthase (RefSeq) sig. 54 90
o Escherichia fergusonii Becca EFB2_03987 Dual-specificity RNA pseudouridine synthase RluA insig. 56 89
o Escherichia coli Nissle 1917 ECOLIN_RS00310 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 55 89
o Erwinia amylovora T8 OLJFJH_01345 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 55 88
o Shewanella sp. ANA-3 Shewana3_0799 ribosomal large subunit pseudouridine synthase A (RefSeq) insig. 54 89
o Escherichia coli BL21 ECD_00060 dual specificity 23S rRNA pseudouridine(746), tRNA pseudouridine(32) synthase, SAM-dependent cofit 55 89
o Escherichia coli ECOR27 NOLOHH_03150 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 55 89
o Escherichia coli ECOR38 HEPCGN_08795 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA cofit 55 89
o Escherichia coli ECRC62 BNILDI_08455 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA cofit 55 89
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03600 Ribosomal large subunit pseudouridine synthase A insig. 55 89
o Escherichia coli BW25113 b0058 rluA pseudouridine synthase for 23S rRNA (position 746) and tRNAphe(position 32) (NCBI) sig. 55 89
o Escherichia coli ECRC100 OKFHMN_10805 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA cofit 54 89
o Escherichia coli ECRC101 MCAODC_01320 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 54 89
o Escherichia coli ECRC102 NIAGMN_08655 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA cofit 54 89
o Escherichia coli ECRC98 JDDGAC_14400 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 54 89
o Escherichia coli ECRC99 KEDOAH_17350 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA no data 54 89
o Pantoea sp. MT58 IAI47_16060 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 54 88
o Serratia liquefaciens MT49 IAI46_03270 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 58 82
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_06080 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA cofit 53 88
o Erwinia tracheiphila SCR3 LU632_RS02800 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA no data 53 88
o Alteromonas macleodii MIT1002 MIT1002_00658 Ribosomal large subunit pseudouridine synthase A insig. 55 83
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS12935 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA cofit 53 88
o Dechlorosoma suillum PS Dsui_3205 pseudouridine synthase, RluA family insig. 50 82
  Shewanella amazonensis SB2B Sama_2197 pseudouridylate synthase (RefSeq) insig. 50 84
o Dinoroseobacter shibae DFL-12 Dshi_3106 pseudouridine synthase (RefSeq) insig. 51 81
o Acinetobacter radioresistens SK82 MPMX26_02477 Dual-specificity RNA pseudouridine synthase RluA insig. 48 84
  Shewanella loihica PV-4 Shew_1460 pseudouridine synthase (RefSeq) no data 47 83
o Phaeobacter inhibens DSM 17395 PGA1_c33080 ribosomal large subunit pseudouridine synthase A sig. 48 83
o Agrobacterium fabrum C58 Atu4041 ribosomal large subunit pseudouridine synthase A sig. 44 87
o Acinetobacter baumannii LAC-4 RR41_RS18405 RluA family pseudouridine synthase insig. 49 81
  Shewanella sp. ANA-3 Shewana3_1430 pseudouridine synthase (RefSeq) sig. 45 84
o Kangiella aquimarina DSM 16071 B158DRAFT_1514 Pseudouridylate synthases, 23S RNA-specific insig. 44 84
  Pseudomonas aeruginosa PA14 IKLFDK_16600 RNA pseudouridine synthase sig. 47 79
  Pseudomonas aeruginosa PUPa3 DQ20_RS40350 RluA family pseudouridine synthase insig. 46 79
  Pseudomonas aeruginosa MRSN321 DY961_RS00685 RluA family pseudouridine synthase insig. 46 79
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3559 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) insig. 45 78
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS03255 pseudouridine synthase insig. 43 87
  Pseudomonas sp. SVBP6 COO64_RS06925 RluA family pseudouridine synthase insig. 47 79
  Shewanella loihica PV-4 Shew_2529 pseudouridine synthase (RefSeq) insig. 46 82
  Pseudomonas sp. BP01 JOY50_RS16355 RluA family pseudouridine synthase insig. 47 79
  Pseudomonas putida KT2440 PP_1731 23S rRNA (746) and tRNA (32) pseudouridine synthase sig. 46 79
  Vibrio cholerae E7946 ATCC 55056 CSW01_14535 RluA family pseudouridine synthase insig. 43 87
  Pseudomonas syringae pv. syringae B728a Psyr_1610 ribosomal large subunit pseudouridine synthase A insig. 46 78
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1610 ribosomal large subunit pseudouridine synthase A insig. 46 78
  Pseudomonas stutzeri RCH2 Psest_2948 pseudouridine synthase, RluA family sig. 44 79
  Pseudomonas fluorescens FW300-N2C3 AO356_19405 pseudouridine synthase insig. 45 79
  Pseudomonas simiae WCS417 PS417_19475 pseudouridine synthase sig. 45 79
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5794 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) strong 45 79
  Pseudomonas fluorescens SBW25 PFLU_RS21445 RluA family pseudouridine synthase insig. 45 79
  Pseudomonas fluorescens SBW25-INTG PFLU_RS21445 RluA family pseudouridine synthase sig. 45 79
  Enterobacter asburiae PDN3 EX28DRAFT_1359 Pseudouridylate synthases, 23S RNA-specific insig. 44 81
  Pseudomonas fluorescens FW300-N2E3 AO353_02385 pseudouridine synthase no data 45 79
  Variovorax sp. SCN45 GFF7036 LSU rRNA pseudouridine(746) synthase (EC 5.4.99.29) @ tRNA pseudouridine(32) synthase (EC 5.4.99.28) insig. 45 77
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04097 Dual-specificity RNA pseudouridine synthase RluA cofit 44 79
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4194 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) insig. 45 79
  Pseudomonas orientalis W4I3 QF045_RS21620 RluA family pseudouridine synthase insig. 45 79
  Klebsiella michiganensis M5al BWI76_RS17615 RNA pseudouridine synthase insig. 41 88
  Pseudomonas sp. DMC3 GFF2599 Dual-specificity RNA pseudouridine synthase RluA insig. 45 79
  Enterobacter sp. TBS_079 MPMX20_02187 Dual-specificity RNA pseudouridine synthase RluA insig. 44 81
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3753 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) sig. 45 79
  Pseudomonas segetis P6 MPMX49_03213 Dual-specificity RNA pseudouridine synthase RluA insig. 44 79
  Pseudomonas sp. RS175 PFR28_03154 Dual-specificity RNA pseudouridine synthase RluA insig. 45 79
  Pseudomonas sp. S08-1 OH686_19760 LSU rRNA pseudouridine(746) synthase or tRNA pseudouridine(32) synthase insig. 44 79
  Klebsiella pneumoniae MKP103 KDGMDA_24890 RNA pseudouridine synthase insig. 41 83
  Acinetobacter baumannii LAC-4 RR41_RS05195 RluA family pseudouridine synthase insig. 45 83
  Bacteroides ovatus ATCC 8483 BACOVA_05306 pseudouridine synthase, RluA family insig. 41 85
  Serratia liquefaciens MT49 IAI46_20985 RluA family pseudouridine synthase insig. 41 83
  Rahnella sp. WP5 EX31_RS17740 RluA family pseudouridine synthase insig. 42 83
  Acinetobacter radioresistens SK82 MPMX26_01026 Dual-specificity RNA pseudouridine synthase RluA cofit 41 83
o Acidovorax sp. GW101-3H11 Ac3H11_174 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) insig. 41 84
  Erwinia amylovora T8 OLJFJH_10525 RNA pseudouridine synthase insig. 41 83
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS01385 RluA family pseudouridine synthase insig. 40 83
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS05180 RluA family pseudouridine synthase insig. 42 78
  Pantoea sp. MT58 IAI47_07280 RluA family pseudouridine synthase insig. 39 88
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS14830 RluA family pseudouridine synthase insig. 43 80
  Phocaeicola dorei CL03T12C01 ABI39_RS18705 RluA family pseudouridine synthase insig. 41 78
  Bacteroides thetaiotaomicron VPI-5482 BT4501 ribosomal large subunit pseudouridine synthase A (NCBI ptt file) insig. 42 78
  Bacteroides stercoris CC31F HMPREF1181_RS13725 RNA pseudouridine synthase insig. 41 84
  Synechococcus elongatus PCC 7942 Synpcc7942_1374 rluA ribosomal large subunit pseudouridine synthase D sig. 43 78
  Caulobacter crescentus NA1000 CCNA_01343 ribosomal large subunit pseudouridine synthase C sig. 41 83
  Caulobacter crescentus NA1000 Δfur CCNA_01343 ribosomal large subunit pseudouridine synthase C cofit 41 83
  Phocaeicola dorei CL03T12C01 ABI39_RS17485 RluA family pseudouridine synthase insig. 35 89
  Bacteroides stercoris CC31F HMPREF1181_RS16530 RluA family pseudouridine synthase insig. 35 86
  Synechocystis sp000284455 PCC 6803 SGL_RS11530 RluA family pseudouridine synthase strong 34 82
  Azospirillum sp. SherDot2 MPMX19_01718 Ribosomal large subunit pseudouridine synthase C insig. 39 78
  Bacteroides thetaiotaomicron VPI-5482 BT0642 RNA pseudouridylate synthase (NCBI ptt file) sig. 36 78
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS03715 RluA family pseudouridine synthase sig. 35 89
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS08615 RluA family pseudouridine synthase strong 33 81