Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_05505 | | response regulator | insig. | 100 | 100 |
o | Shewanella oneidensis MR-1 | SO2547 | | response regulator (NCBI ptt file) | insig. | 61 | 100 |
o | Paraburkholderia sabiae LMG 24235 | QEN71_RS16460 | | response regulator | insig. | 52 | 99 |
o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03605 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | insig. | 52 | 99 |
o | Paraburkholderia graminis OAS925 | ABIE53_004651 | | CheY-like chemotaxis protein | strong | 50 | 99 |
o | Burkholderia phytofirmans PsJN | BPHYT_RS34765 | | chemotaxis protein | insig. | 48 | 99 |
| Pseudomonas sp. RS175 | PFR28_02095 | | Protein-glutamate methylesterase/protein-glutamine glutaminase | insig. | 55 | 98 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1641 | | Chemotaxis protein CheC -- inhibitor of MCP methylation | insig. | 54 | 98 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_24215 | | chemotaxis protein CheC | insig. | 54 | 98 |
o | Ralstonia sp. UNC404CL21Col | ABZR87_RS16860 | | response regulator | insig. | 48 | 99 |
| Pseudomonas stutzeri RCH2 | Psest_2105 | | Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain | sig. | 50 | 99 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02779 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | no data | 47 | 99 |
| Shewanella loihica PV-4 | Shew_0453 | | response regulator receiver protein (RefSeq) | insig. | 46 | 100 |
o | Alteromonas macleodii MIT1002 | MIT1002_03354 | | Stage 0 sporulation protein A | insig. | 52 | 100 |
| Shewanella sp. ANA-3 | Shewana3_0571 | | response regulator receiver protein (RefSeq) | sig. | 45 | 100 |
| Shewanella oneidensis MR-1 | SO0570 | | response regulator (NCBI ptt file) | cofit | 45 | 100 |
| Pseudomonas sp. S08-1 | OH686_16630 | | Chemotaxis protein CheC -- inhibitor of MCP methylation | insig. | 50 | 97 |
| Shewanella amazonensis SB2B | Sama_3136 | | CheC, inhibitor of MCP methylation (RefSeq) | cofit | 46 | 100 |
| Paraburkholderia graminis OAS925 | ABIE53_006008 | | two-component system chemotaxis response regulator CheY | sig. | 46 | 99 |
| Pseudomonas syringae pv. syringae B728a | Psyr_0886 | | Response regulator receiver | insig. | 49 | 98 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0886 | | Response regulator receiver | insig. | 49 | 98 |
| Alteromonas macleodii MIT1002 | MIT1002_00652 | | Chemotaxis protein CheY | insig. | 41 | 99 |
| Marinobacter adhaerens HP15 | HP15_2377 | | response regulator receiver protein | insig. | 43 | 99 |
| Pseudomonas sp. S08-1 | OH686_03270 | | Chemotaxis protein CheC -- inhibitor of MCP methylation | insig. | 48 | 98 |
| Alteromonas macleodii MIT1002 | MIT1002_03095 | | Chemotaxis protein CheY | insig. | 38 | 100 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_14930 | | response regulator | insig. | 40 | 95 |
| Alteromonas macleodii MIT1002 | MIT1002_00934 | | Chemotaxis protein CheY | insig. | 42 | 95 |
| Rhodopseudomonas palustris CGA009 | TX73_008370 | | response regulator | cofit | 36 | 95 |
| Burkholderia phytofirmans PsJN | BPHYT_RS01790 | | LuxR family transcriptional regulator | strong | 32 | 92 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02179 | | two component transcriptional regulator, LuxR family | cofit | 32 | 92 |
| Paraburkholderia graminis OAS925 | ABIE53_000448 | | two-component system invasion response regulator UvrY | strong | 32 | 92 |
| Marinobacter adhaerens HP15 | HP15_806 | | response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) | insig. | 34 | 95 |
| Klebsiella michiganensis M5al | BWI76_RS01605 | | transcriptional regulatory protein ZraR | insig. | 31 | 90 |
| Sphingomonas koreensis DSMZ 15582 | Ga0059261_3166 | | two component transcriptional regulator, LytTR family | no data | 32 | 95 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS16785 | | response regulator | insig. | 36 | 70 |
| Escherichia coli Nissle 1917 | ECOLIN_RS23090 | | sigma-54-dependent response regulator transcription factor ZraR | insig. | 29 | 90 |
| Escherichia fergusonii Becca | EFB2_04606 | | Transcriptional regulatory protein ZraR | insig. | 29 | 90 |
| Escherichia coli ECRC101 | OKFHMN_13320 | zraR | sigma-54-dependent response regulator transcription factor ZraR | insig. | 29 | 90 |
| Escherichia coli ECRC98 | JDDGAC_16945 | zraR | sigma-54-dependent response regulator transcription factor ZraR | no data | 29 | 90 |
| Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS02895 | | PAS domain-containing protein | insig. | 32 | 94 |
| Escherichia coli BL21 | ECD_03881 | | fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein | insig. | 29 | 90 |
| Escherichia coli ECOR27 | NOLOHH_05465 | zraR | sigma-54-dependent response regulator transcription factor ZraR | cofit | 29 | 90 |
| Escherichia coli ECOR38 | HEPCGN_11960 | zraR | sigma-54-dependent response regulator transcription factor ZraR | cofit | 29 | 90 |
| Escherichia coli ECRC101 | MCAODC_03820 | zraR | sigma-54-dependent response regulator transcription factor ZraR | insig. | 29 | 90 |
| Escherichia coli ECRC102 | NIAGMN_11070 | zraR | sigma-54-dependent response regulator transcription factor ZraR | insig. | 29 | 90 |
| Escherichia coli ECRC62 | BNILDI_06055 | zraR | sigma-54-dependent response regulator transcription factor ZraR | insig. | 29 | 90 |
| Escherichia coli ECRC99 | KEDOAH_14840 | zraR | sigma-54-dependent response regulator transcription factor ZraR | no data | 29 | 90 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_04045 | | Transcriptional regulatory protein ZraR | insig. | 29 | 90 |
| Escherichia coli BW25113 | b4004 | zraR | fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein (NCBI) | insig. | 29 | 90 |
| Mycobacterium tuberculosis H37Rv | Rv0844c | | Possible nitrate/nitrite response transcriptional regulatory protein NarL | insig. | 35 | 84 |
| Phocaeicola dorei CL03T12C01 | ABI39_RS05780 | | response regulator transcription factor | strong | 31 | 93 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS03950 | | PAS domain-containing hybrid sensor histidine kinase/response regulator | insig. | 33 | 88 |
| Phaeobacter inhibens DSM 17395 | PGA1_262p02130 | | response regulator receiver | insig. | 31 | 92 |
| Dechlorosoma suillum PS | Dsui_2485 | | response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain | insig. | 32 | 95 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_0196 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | strong | 33 | 95 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS18540 | | response regulator | insig. | 31 | 95 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_09180 | | DNA-binding response regulator | insig. | 38 | 84 |
| Phaeobacter inhibens DSM 17395 | PGA1_c07670 | | two component regulatory sytem | insig. | 32 | 84 |
| Parabacteroides merdae CL09T00C40 | HMPREF1078_RS12130 | | ATP-binding protein | insig. | 31 | 92 |
| Rhizobium sp. OAE497 | ABIE40_RS16015 | | response regulator | insig. | 30 | 88 |
| Dechlorosoma suillum PS | Dsui_1205 | | response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | insig. | 31 | 98 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS08460 | | chemotaxis protein CheY | insig. | 31 | 95 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF4188 | | Response regulator of zinc sigma-54-dependent two-component system | insig. | 28 | 90 |
| Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS15250 | | response regulator | cofit | 31 | 95 |
| Rhizobium sp. OAE497 | ABIE40_RS28740 | | chemotaxis-specific protein-glutamate methyltransferase CheB | cofit | 32 | 85 |
| Dinoroseobacter shibae DFL-12 | Dshi_1081 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | strong | 29 | 91 |
| Caulobacter crescentus NA1000 | CCNA_00441 | | chemotaxis receiver domain protein cheYI | strong | 33 | 88 |
| Caulobacter crescentus NA1000 Δfur | CCNA_00441 | | chemotaxis receiver domain protein cheYI | cofit | 33 | 88 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU2934 | ntrX | sigma-54 dependent transcriptional regulator/response regulator (TIGR) | no data | 38 | 64 |
| Bosea sp. OAE506 | ABIE41_RS24085 | | response regulator transcription factor | no data | 34 | 95 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_02305 | | LuxR family transcriptional regulator | insig. | 33 | 94 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4462 | | Serine phosphatase RsbU, regulator of sigma subunit | insig. | 33 | 96 |
| Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS00275 | | ATP-binding protein | insig. | 33 | 90 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU3381 | ntrC | transcriptional regulatory protein zraR (TIGR) | strong | 28 | 90 |
| Lysobacter sp. OAE881 | ABIE51_RS00550 | | LytTR family DNA-binding domain-containing protein | insig. | 28 | 95 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_2107 | | response regulator receiver protein (RefSeq) | strong | 33 | 93 |
| Burkholderia phytofirmans PsJN | BPHYT_RS10860 | | transcriptional regulator | insig. | 32 | 87 |
| Lysobacter sp. OAE881 | ABIE51_RS16750 | | response regulator transcription factor | cofit | 31 | 91 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_1122 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | insig. | 29 | 96 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS00505 | | response regulator transcription factor RqpR | strong | 29 | 92 |
| Dechlorosoma suillum PS | Dsui_1713 | | chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain | insig. | 34 | 87 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_130 | | DNA-binding response regulator, LuxR family | insig. | 32 | 91 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS13890 | | LuxR family transcriptional regulator | strong | 31 | 98 |
| Acinetobacter radioresistens SK82 | MPMX26_02509 | | Sensor histidine kinase RcsC | cofit | 33 | 88 |
| Shewanella oneidensis MR-1 | SO0549 | | chemotaxis protein CheY/response regulator receiver domain protein (NCBI ptt file) | insig. | 28 | 95 |
| Rhizobium sp. OAE497 | ABIE40_RS16445 | | response regulator transcription factor | insig. | 38 | 66 |
| Azospirillum brasilense Sp245 | AZOBR_RS01060 | | ATPase AAA | insig. | 32 | 75 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_2149 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | strong | 31 | 94 |
| Dinoroseobacter shibae DFL-12 | Dshi_2708 | | PAS/PAC sensor hybrid histidine kinase (RefSeq) | sig. | 31 | 95 |
| Pseudomonas putida KT2440 | PP_2126 | | DNA-binding response regulator, LuxR family | insig. | 29 | 95 |
| Alteromonas macleodii MIT1002 | MIT1002_02154 | | Response regulator UvrY | strong | 28 | 95 |
| Marinobacter adhaerens HP15 | HP15_1567 | | two component transcriptional regulator, LuxR family | strong | 27 | 96 |
| Rhodanobacter denitrificans MT42 | LRK55_RS13410 | | chemotaxis response regulator protein-glutamate methylesterase | insig. | 37 | 85 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS13670 | | chemotaxis response regulator protein-glutamate methylesterase | insig. | 37 | 85 |
| Azospirillum sp. SherDot2 | MPMX19_06089 | | Regulatory protein LuxO | insig. | 33 | 74 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_1140 | | Response regulator of the LytR/AlgR family | strong | 32 | 93 |
| Pseudomonas sp. RS175 | PFR28_02510 | | Chemotaxis protein CheY | insig. | 32 | 92 |
| Bosea sp. OAE506 | ABIE41_RS10985 | | response regulator | insig. | 31 | 95 |
| Azospirillum brasilense Sp245 | AZOBR_RS20090 | | chemotaxis protein CheY | cofit | 30 | 95 |
| Sinorhizobium meliloti 1021 | SMc03006 | | chemotaxis regulator protein | insig. | 29 | 92 |