Homologs of CSW01_04190 from Vibrio cholerae E7946 ATCC 55056

DEAD/DEAH box helicase
SEED: ATP-dependent RNA helicase YejH

167 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Vibrio cholerae E7946 ATCC 55056 CSW01_04190 DEAD/DEAH box helicase insig. 100 100
o Shewanella oneidensis MR-1 SO1408 helicase, putative (NCBI ptt file) insig. 75 99
  Dinoroseobacter shibae DFL-12 Dshi_0992 type III restriction protein res subunit (RefSeq) cofit 43 66
  Fusobacterium nucleatum SB010 HUW76_10085 DUF3427 domain-containing protein cofit 33 63
  Bifidobacterium breve UCC2003 BBR_RS10690 DUF3427 domain-containing protein cofit 29 61
  Shewanella oneidensis MR-1 SO0368 helicase (NCBI ptt file) insig. 34 56
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS16220 DEAD/DEAH box helicase insig. 30 34
  Phocaeicola dorei CL03T12C01 ABI39_RS11135 DEAD/DEAH box helicase sig. 30 34
  Phocaeicola dorei CL03T12C01 ABI39_RS12105 DEAD/DEAH box helicase insig. 30 34
  Synechococcus elongatus PCC 7942 Synpcc7942_0725 DEAD/DEAH box helicase-like insig. 29 34
  Phocaeicola dorei CL03T12C01 ABI39_RS20720 DEAD/DEAH box helicase insig. 28 33
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS03500 DEAD/DEAH box helicase insig. 28 33
  Phocaeicola dorei CL03T12C01 ABI39_RS14855 DEAD/DEAH box helicase insig. 29 33
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS18545 DEAD/DEAH box helicase family protein insig. 28 33
  Phocaeicola dorei CL03T12C01 ABI39_RS16865 DEAD/DEAH box helicase insig. 29 33
  Magnetospirillum magneticum AMB-1 AMB_RS01810 DNA helicase insig. 28 34
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS0119825 DEAD/DEAH box helicase strong 27 33
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_16030 ATP-dependent helicase cofit 29 35
  Erwinia tracheiphila SCR3 LU632_RS17600 DEAD/DEAH box helicase insig. 29 35
  Castellaniella sp019104865 MT123 ABCV34_RS05460 DEAD/DEAH box helicase family protein insig. 24 33
  Paraburkholderia graminis OAS925 ABIE53_005410 type I restriction enzyme R subunit insig. 27 33
  Erwinia amylovora T8 OLJFJH_11705 ATP-dependent helicase insig. 28 35
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0422 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases insig. 25 33
  Pectobacterium carotovorum WPP14 HER17_RS12960 DEAD/DEAH box helicase family protein insig. 26 33
  Enterobacter sp. TBS_079 MPMX20_03150 Putative DNA repair helicase RadD insig. 26 33
  Dickeya dianthicola 67-19 HGI48_RS09190 DEAD/DEAH box helicase insig. 26 34
  Enterobacter asburiae PDN3 EX28DRAFT_0377 DNA or RNA helicases of superfamily II insig. 26 33
  Rahnella sp. WP5 EX31_RS19200 DEAD/DEAH box helicase insig. 26 33
  Klebsiella michiganensis M5al BWI76_RS19815 ATP-dependent helicase insig. 26 35
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3752 ATP-dependent RNA helicase YejH insig. 26 33
  Dickeya dadantii 3937 DDA3937_RS09150 DEAD/DEAH box helicase insig. 25 34
  Vibrio cholerae E7946 ATCC 55056 CSW01_08225 ATP-dependent helicase insig. 25 34
  Dickeya dianthicola ME23 DZA65_RS09490 DEAD/DEAH box helicase insig. 25 34
  Klebsiella pneumoniae MKP103 KDGMDA_26755 ATP-dependent helicase insig. 25 33
  Klebsiella pneumoniae MRSN742743 KFA93_RS06390 DEAD/DEAH box helicase insig. 25 33
  Serratia liquefaciens MT49 IAI46_17350 DEAD/DEAH box helicase family protein insig. 26 35
  Pseudomonas stutzeri RCH2 Psest_1100 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases insig. 25 35
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS07505 DEAD/DEAH box helicase family protein insig. 24 41
  Pantoea sp. MT58 IAI47_06580 DEAD/DEAH box helicase insig. 26 34
  Cellulophaga baltica 18 M666_RS16900 DEAD/DEAH box helicase family protein sig. 25 33
  Escherichia coli BL21 ECD_02114 putative ATP-dependent DNA or RNA helicase sig. 25 33
  Escherichia coli BW25113 b2184 yejH DNA damage response helicase (yejH or radD) (from data) strong 25 33
  Serratia liquefaciens MT49 IAI46_02405 DEAD/DEAH box helicase family protein insig. 24 34
  Escherichia coli ECRC100 OKFHMN_23355 radD Putative DNA repair helicase RadD cofit 25 33
  Escherichia coli ECRC101 MCAODC_14405 radD Putative DNA repair helicase RadD insig. 25 33
  Escherichia coli ECRC102 NIAGMN_21120 radD Putative DNA repair helicase RadD insig. 25 33
  Escherichia coli ECRC98 JDDGAC_27315 radD Putative DNA repair helicase RadD insig. 25 33
  Escherichia coli ECRC99 KEDOAH_04830 radD Putative DNA repair helicase RadD no data 25 33
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01525 Putative DNA repair helicase RadD insig. 25 33
  Dickeya dianthicola 67-19 HGI48_RS21705 DEAD/DEAH box helicase family protein insig. 26 33
  Marinobacter adhaerens HP15 HP15_2832 DNA damage response helicase (yejH or radD) (from data) sig. 26 34
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS00665 DEAD/DEAH box helicase cofit 25 34
  Escherichia coli ECOR27 NOLOHH_14930 radD Putative DNA repair helicase RadD insig. 25 33
  Escherichia coli ECOR38 HEPCGN_22620 radD Putative DNA repair helicase RadD insig. 25 33
  Escherichia coli ECRC62 BNILDI_13850 radD Putative DNA repair helicase RadD insig. 25 33
  Shewanella sp. ANA-3 Shewana3_2026 type III restriction enzyme, res subunit (RefSeq) insig. 22 38
  Pseudomonas putida KT2440 PP_4740 Type I restriction enzyme EcoAI R protein insig. 24 34
  Escherichia coli ECOR38 HEPCGN_09450 hsdR DEAD/DEAH box helicase insig. 23 36
  Escherichia coli ECRC100 OKFHMN_11410 hsdR DEAD/DEAH box helicase insig. 23 36
  Escherichia coli ECRC101 MCAODC_01925 hsdR DEAD/DEAH box helicase insig. 23 36
  Escherichia coli ECRC102 NIAGMN_09260 hsdR DEAD/DEAH box helicase insig. 23 36
  Escherichia coli ECRC98 JDDGAC_15005 hsdR DEAD/DEAH box helicase insig. 23 36
  Escherichia coli ECRC99 KEDOAH_16735 hsdR DEAD/DEAH box helicase no data 23 36
  Escherichia fergusonii Becca EFB2_01672 Putative DNA repair helicase RadD insig. 25 33
  Escherichia coli Nissle 1917 ECOLIN_RS12765 DEAD/DEAH box helicase insig. 25 33
  Phocaeicola dorei CL03T12C01 ABI39_RS21435 DEAD/DEAH box helicase family protein insig. 24 41
  Klebsiella pneumoniae MKP103 KDGMDA_20135 helicase insig. 25 38
  Shewanella sp. ANA-3 Shewana3_2524 type III restriction enzyme, res subunit (RefSeq) insig. 26 34
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS01075 DEAD/DEAH box helicase family protein insig. 24 36
  Shewanella loihica PV-4 Shew_1532 type III restriction enzyme, res subunit (RefSeq) insig. 25 32
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS03830 Helicase associated domain protein cofit 29 32
  Methylophilus sp. DMC18 GFF1952 hypothetical protein cofit 23 38
  Rhodanobacter sp. FW510-T8 OKGIIK_13985 Restriction endonuclease insig. 24 36
  Bacteroides thetaiotaomicron VPI-5482 BT4517 Type I restriction enzyme EcoKI R protein (NCBI ptt file) insig. 24 41
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS02600 Helicase associated domain protein insig. 30 32
  Phocaeicola dorei CL03T12C01 ABI39_RS15790 DEAD/DEAH box helicase insig. 25 33
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0384 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases insig. 23 35
  Shewanella sp. ANA-3 Shewana3_2963 hsdR type I restriction enzyme EcoKI subunit R (RefSeq) insig. 25 34
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS18925 DEAD/DEAH box helicase insig. 26 33
  Ralstonia solanacearum PSI07 RPSI07_RS08090 restriction endonuclease subunit R insig. 25 33
  Shewanella oneidensis MR-1 SO4267 hsdR-2 type I restriction-modification system, R subunit (NCBI ptt file) insig. 25 34
  Alteromonas macleodii MIT1002 MIT1002_03395 Type-1 restriction enzyme R protein insig. 22 44
  Cellulophaga baltica 18 M666_RS16985 DEAD/DEAH box helicase insig. 25 32
  Bacteroides stercoris CC31F HMPREF1181_RS13645 DEAD/DEAH box helicase family protein insig. 23 41
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF788 ATP-dependent RNA helicase YejH cofit 24 33
  Shewanella oneidensis MR-1 SO2744 DNA damage response helicase (yejH or radD) (from data) strong 25 32
  Escherichia coli ECRC100 OKFHMN_04370 DEAD/DEAH box helicase insig. 26 34
  Escherichia coli ECRC101 MCAODC_23715 DEAD/DEAH box helicase insig. 26 34
  Escherichia coli ECRC102 NIAGMN_03795 DEAD/DEAH box helicase cofit 26 34
  Escherichia coli ECRC98 JDDGAC_07975 DEAD/DEAH box helicase insig. 26 34
  Escherichia coli ECRC99 KEDOAH_23540 DEAD/DEAH box helicase no data 26 34
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1002 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) insig. 24 35
  Escherichia coli BW25113 b4350 hsdR endonuclease R (RefSeq) insig. 24 34
  Shewanella amazonensis SB2B Sama_2080 DNA damage response helicase (yejH or radD) (from data) sig. 24 32
  Bifidobacterium breve UCC2003 BBR_RS14285 excinuclease ABC subunit UvrB strong 28 16
  Alteromonas macleodii MIT1002 MIT1002_00122 UvsW helicase insig. 29 13
  Pantoea sp. MT58 IAI47_16555 type I restriction-modification system endonuclease insig. 24 35
  Bacteroides ovatus ATCC 8483 BACOVA_03889 helicase C-terminal domain protein insig. 23 33
  Escherichia coli BL21 ECD_04216 endonuclease R Type I restriction enzyme insig. 29 11
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4151 Uncharacterized protein conserved in bacteria no data 22 33
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4206 Uncharacterized protein conserved in bacteria no data 22 33
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1766 DNA or RNA helicases of superfamily II insig. 23 35
  Synechococcus elongatus PCC 7942 Synpcc7942_0563 uvrB excinuclease ABC subunit B strong 28 10
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS09180 restriction endonuclease subunit R insig. 24 24
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_10235 hypothetical protein cofit 20 34
  Fusobacterium nucleatum SB010 HUW76_02625 excinuclease ABC subunit UvrB strong 26 10
  Ralstonia solanacearum PSI07 RPSI07_RS19240 excinuclease ABC subunit UvrB sig. 29 10
  Lysobacter sp. OAE881 ABIE51_RS15310 excinuclease ABC subunit UvrB strong 25 15
  Marinobacter adhaerens HP15 HP15_1372 excinuclease ABC subunit B strong 27 10
  Rhodospirillum rubrum S1H Rru_A1386 DEAD/DEAH box helicase (NCBI) insig. 25 31
  Synechocystis sp000284455 PCC 6803 SGL_RS14040 excinuclease ABC subunit UvrB cofit 28 10
  Ralstonia solanacearum GMI1000 RS_RS05005 UvrABC system protein B strong 28 10
  Herbaspirillum seropedicae SmR1 HSERO_RS15840 excinuclease ABC subunit B strong 26 15
  Kangiella aquimarina DSM 16071 B158DRAFT_2341 Excinuclease ABC subunit B strong 25 13
  Bacteroides ovatus ATCC 8483 BACOVA_03714 excinuclease ABC, B subunit cofit 25 15
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1215 excinuclease ABC, B subunit strong 28 15
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS14225 excinuclease ABC subunit UvrB cofit 28 10
  Ralstonia solanacearum UW163 UW163_RS11690 excinuclease ABC subunit UvrB insig. 28 10
  Ralstonia solanacearum GMI1000 RS_RS17010 restriction endonuclease subunit R insig. 23 32
  Ralstonia sp. UNC404CL21Col ABZR87_RS09940 excinuclease ABC subunit UvrB strong 28 10
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2034.1 Excinuclease ABC subunit B cofit 28 10
  Mycobacterium tuberculosis H37Rv Rv1633 Probable excinuclease ABC (subunit B-helicase) UvrB strong 29 9
  Enterobacter sp. TBS_079 MPMX20_03447 ATP-dependent RNA helicase SrmB strong 23 12
  Bacteroides stercoris CC31F HMPREF1181_RS15225 excinuclease ABC subunit UvrB insig. 23 15
  Phocaeicola dorei CL03T12C01 ABI39_RS15300 excinuclease ABC subunit UvrB cofit 23 15
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS01765 excinuclease ABC subunit UvrB strong 23 15
  Dinoroseobacter shibae DFL-12 Dshi_3695 type III restriction protein res subunit (RefSeq) no data 30 13
  Dinoroseobacter shibae DFL-12 Dshi_4007 type III restriction protein res subunit (RefSeq) no data 30 13
  Methanococcus maripaludis JJ MMJJ_RS07175 DEAD/DEAH box helicase cofit 31 15
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS18110 excinuclease ABC subunit UvrB cofit 29 10
  Dechlorosoma suillum PS Dsui_2434 excinuclease ABC, B subunit strong 28 9
  Paraburkholderia sabiae LMG 24235 QEN71_RS23870 excinuclease ABC subunit UvrB sig. 28 9
  Burkholderia phytofirmans PsJN BPHYT_RS06905 excinuclease ABC subunit B strong 28 10
  Paraburkholderia graminis OAS925 ABIE53_001645 excinuclease ABC subunit B strong 28 10
  Caulobacter crescentus NA1000 CCNA_03076 excinuclease ABC subunit B strong 28 10
  Caulobacter crescentus NA1000 Δfur CCNA_03076 excinuclease ABC subunit B cofit 28 10
  Alteromonas macleodii MIT1002 MIT1002_01261 Excinuclease ABC subunit B cofit 25 15
  Cupriavidus basilensis FW507-4G11 RR42_RS05995 excinuclease ABC subunit B strong 28 10
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04973 Excinuclease ABC subunit B sig. 28 10
  Acidovorax sp. GW101-3H11 Ac3H11_4114 Excinuclease ABC subunit B strong 26 10
  Shewanella oneidensis MR-1 SO2506 uvrB excinuclease ABC, B subunit (NCBI ptt file) strong 27 9
  Shewanella sp. ANA-3 Shewana3_2166 excinuclease ABC subunit B (RefSeq) strong 27 9
  Phaeobacter inhibens DSM 17395 PGA1_c26160 uvrABC system protein B strong 29 9
  Cellulophaga baltica 18 M666_RS19015 excinuclease ABC subunit UvrB insig. 25 15
  Dinoroseobacter shibae DFL-12 Dshi_2192 excinuclease ABC, B subunit (RefSeq) strong 29 9
  Variovorax sp. OAS795 ABID97_RS13995 excinuclease ABC subunit UvrB strong 27 10
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4962 Excinuclease ABC subunit B strong 26 10
  Pseudomonas aeruginosa MRSN321 DY961_RS03545 DEAD/DEAH box helicase family protein insig. 22 34
  Methanococcus maripaludis S2 MMP_RS03805 excinuclease ABC subunit UvrB insig. 26 10
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS14375 excinuclease ABC subunit UvrB insig. 26 9
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19110 excinuclease ABC subunit B strong 27 11
  Methanococcus maripaludis JJ MMJJ_RS01245 excinuclease ABC subunit UvrB insig. 26 10
  Rhodanobacter denitrificans MT42 LRK55_RS13955 excinuclease ABC subunit UvrB strong 26 9
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS14235 excinuclease ABC subunit UvrB insig. 26 9
  Rhodanobacter sp. FW510-T8 OKGIIK_03100 uvrB excinuclease ABC subunit UvrB cofit 26 9
  Pseudomonas sp. RS175 PFR28_04172 ATP-dependent RNA helicase DbpA sig. 23 11
  Pseudomonas syringae pv. syringae B728a Psyr_0516 ATP-dependent RNA helicase DbpA insig. 22 11
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0516 ATP-dependent RNA helicase DbpA insig. 22 11
  Azospirillum brasilense Sp245 AZOBR_RS16420 excinuclease ABC subunit B cofit 27 10
  Castellaniella sp019104865 MT123 ABCV34_RS05110 excinuclease ABC subunit UvrB cofit 27 9
  Burkholderia phytofirmans PsJN BPHYT_RS00550 excinuclease ABC subunit B sig. 26 10
  Bacteroides thetaiotaomicron VPI-5482 BT0570 excinuclease ABC subunit B (NCBI ptt file) strong 23 15
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4673 ATP-dependent 23S rRNA helicase DbpA strong 23 11
  Pseudomonas sp. DMC3 GFF142 ATP-dependent RNA helicase DbpA insig. 22 11
  Bacteroides stercoris CC31F HMPREF1181_RS11590 DEAD/DEAH box helicase family protein insig. 22 37
  Methylophilus sp. DMC18 GFF1123 UvrABC system protein B cofit 27 9
  Pseudomonas fluorescens FW300-N2E3 AO353_07850 ATP-dependent RNA helicase strong 22 11