Homologs of B158DRAFT_0778 from Kangiella aquimarina DSM 16071

DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18)
SEED: Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)
KEGG: formamidopyrimidine-DNA glycosylase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Kangiella aquimarina DSM 16071 B158DRAFT_0778 DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) cofit 100 100
o Alteromonas macleodii MIT1002 MIT1002_00057 Formamidopyrimidine-DNA glycosylase insig. 55 100
o Escherichia coli ECOR27 NOLOHH_07515 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase cofit 55 100
o Escherichia coli BL21 ECD_03492 formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase insig. 55 100
o Escherichia fergusonii Becca EFB2_00178 Formamidopyrimidine-DNA glycosylase insig. 55 100
o Escherichia coli ECRC101 OKFHMN_15635 Formamidopyrimidine-DNA glycosylase insig. 55 100
o Escherichia coli ECRC101 MCAODC_06145 Formamidopyrimidine-DNA glycosylase insig. 55 100
o Escherichia coli ECRC102 NIAGMN_13395 Formamidopyrimidine-DNA glycosylase insig. 55 100
o Escherichia coli ECRC62 BNILDI_04000 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 55 100
o Escherichia coli ECRC98 JDDGAC_19260 Formamidopyrimidine-DNA glycosylase no data 55 100
o Escherichia coli ECRC99 KEDOAH_12515 Formamidopyrimidine-DNA glycosylase no data 55 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00067 Formamidopyrimidine-DNA glycosylase cofit 55 100
o Escherichia coli BW25113 b3635 mutM formamidopyrimidine-DNA glycosylase (NCBI) insig. 55 100
o Escherichia coli Nissle 1917 ECOLIN_RS20715 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 55 100
o Escherichia coli ECOR38 HEPCGN_14460 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase cofit 54 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF374 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) insig. 54 100
o Pantoea sp. MT58 IAI47_00635 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 54 100
o Enterobacter sp. TBS_079 MPMX20_00100 Formamidopyrimidine-DNA glycosylase insig. 52 100
o Klebsiella michiganensis M5al BWI76_RS27330 DNA-formamidopyrimidine glycosylase insig. 52 100
o Pectobacterium carotovorum WPP14 HER17_RS20815 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 52 100
o Vibrio cholerae E7946 ATCC 55056 CSW01_01175 formamidopyrimidine-DNA glycosylase insig. 52 100
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS13335 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 52 100
o Shewanella amazonensis SB2B Sama_0117 formamidopyrimidine-DNA glycosylase (RefSeq) sig. 51 100
o Enterobacter asburiae PDN3 EX28DRAFT_3885 DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) insig. 52 100
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.5281.1 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) insig. 53 100
o Dickeya dadantii 3937 DDA3937_RS20500 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 52 100
o Lysobacter sp. OAE881 ABIE51_RS00335 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 51 100
o Rahnella sp. WP5 EX31_RS14455 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 51 100
o Dickeya dianthicola 67-19 HGI48_RS00715 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 52 100
o Dickeya dianthicola ME23 DZA65_RS00770 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase sig. 52 100
o Serratia liquefaciens MT49 IAI46_24810 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 51 100
o Shewanella oneidensis MR-1 SO4726 mutM formamidopyrimidine-DNA glycosylase (NCBI ptt file) insig. 49 100
o Rhodanobacter sp. FW510-T8 OKGIIK_13060 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 51 100
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS10815 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 50 100
o Erwinia tracheiphila SCR3 LU632_RS21975 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 51 100
o Rhodanobacter denitrificans MT42 LRK55_RS10505 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 50 100
o Shewanella loihica PV-4 Shew_3690 formamidopyrimidine-DNA glycosylase (RefSeq) insig. 48 100
o Shewanella sp. ANA-3 Shewana3_4084 formamidopyrimidine-DNA glycosylase (RefSeq) cofit 50 100
o Pseudomonas syringae pv. syringae B728a Psyr_4761 DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase insig. 50 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4761 DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase insig. 50 100
o Pseudomonas stutzeri RCH2 Psest_0239 formamidopyrimidine-DNA glycosylase (fpg) insig. 50 100
o Burkholderia phytofirmans PsJN BPHYT_RS02870 formamidopyrimidine-DNA glycosylase insig. 48 100
o Pseudomonas sp. RS175 PFR28_04272 Formamidopyrimidine-DNA glycosylase insig. 49 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2309 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) insig. 49 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_979 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) insig. 49 100
o Paraburkholderia sabiae LMG 24235 QEN71_RS01720 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 48 100
o Paraburkholderia graminis OAS925 ABIE53_000711 formamidopyrimidine-DNA glycosylase insig. 48 100
o Pseudomonas putida KT2440 PP_5125 Formamidopyrimidine-DNA glycosylase insig. 50 100
o Pseudomonas simiae WCS417 PS417_26870 5-hydroxymethyluracil DNA glycosylase insig. 50 100
o Pseudomonas fluorescens FW300-N2E3 AO353_08320 5-hydroxymethyluracil DNA glycosylase insig. 49 100
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01934 DNA-(apurinic or apyrimidinic site) lyase insig. 47 100
o Pseudomonas sp. S08-1 OH686_14125 DNA-formamidopyrimidine glycosylase cofit 50 100
o Pseudomonas fluorescens SBW25 PFLU_RS28515 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 49 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS28515 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 49 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4569 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) insig. 50 100
o Pseudomonas fluorescens FW300-N2C3 AO356_13270 5-hydroxymethyluracil DNA glycosylase insig. 49 100
o Cupriavidus basilensis FW507-4G11 RR42_RS02040 formamidopyrimidine-DNA glycosylase insig. 46 100
o Variovorax sp. SCN45 GFF2353 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) insig. 46 100
o Marinobacter adhaerens HP15 HP15_3493 formamidopyrimidine-DNA glycosylase insig. 47 88
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF825 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) insig. 45 100
o Ralstonia solanacearum GMI1000 RS_RS01975 formamidopyrimidine-DNA glycosylase insig. 44 100
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS11125 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 45 100
o Ralstonia solanacearum PSI07 RPSI07_RS22175 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 45 100
o Ralstonia solanacearum UW163 UW163_RS02455 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 45 100
o Dechlorosoma suillum PS Dsui_1031 formamidopyrimidine-DNA glycosylase Fpg insig. 44 100
o Acinetobacter radioresistens SK82 MPMX26_02486 Formamidopyrimidine-DNA glycosylase insig. 44 100
o Herbaspirillum seropedicae SmR1 HSERO_RS19545 formamidopyrimidine-DNA glycosylase insig. 45 100
o Castellaniella sp019104865 MT123 ABCV34_RS09265 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 42 100
o Ralstonia sp. UNC404CL21Col ABZR87_RS07015 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase cofit 44 100
o Variovorax sp. OAS795 ABID97_RS23725 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 47 100
o Phaeobacter inhibens DSM 17395 PGA1_c36490 formamidopyrimidine-DNA glycosylase MutM insig. 42 100
o Dinoroseobacter shibae DFL-12 Dshi_3369 formamidopyrimidine-DNA glycosylase (RefSeq) insig. 43 100
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3586 DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) insig. 42 100
o Rhodospirillum rubrum S1H Rru_A3799 DNA-formamidopyrimidine glycosylase (NCBI) insig. 44 100
o Azospirillum brasilense Sp245 AZOBR_RS01270 5-hydroxymethyluracil DNA glycosylase insig. 42 100
o Rhodopseudomonas palustris CGA009 TX73_000435 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 41 100
o Caulobacter crescentus NA1000 CCNA_03822 formamidopyrimidine-DNA glycosylase insig. 38 100
o Caulobacter crescentus NA1000 Δfur CCNA_03822 formamidopyrimidine-DNA glycosylase cofit 38 100
o Azospirillum sp. SherDot2 MPMX19_02764 Formamidopyrimidine-DNA glycosylase insig. 40 100
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS14505 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 38 100
o Bosea sp. OAE506 ABIE41_RS04205 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 38 100
o Synechococcus elongatus PCC 7942 Synpcc7942_1323 fpg DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase insig. 38 100
o Magnetospirillum magneticum AMB-1 AMB_RS03255 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 41 100
o Agrobacterium fabrum C58 Atu0321 formamidopyrimidine-DNA glycosylase insig. 35 100
o Sinorhizobium meliloti 1021 SMc01154 formamidopyrimidine-DNA glycosylase insig. 36 100
o Rhizobium sp. OAE497 ABIE40_RS01590 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase insig. 35 100
o Mycobacterium tuberculosis H37Rv Rv2924c Probable formamidopyrimidine-DNA glycosylase Fpg (FAPY-DNA glycosylase) insig. 33 100
  Variovorax sp. SCN45 GFF7985 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) no data 58 46
  Acidovorax sp. GW101-3H11 Ac3H11_3456 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) insig. 44 55
  Desulfovibrio vulgaris Miyazaki F DvMF_2449 formamidopyrimidine-DNA glycosylase (RefSeq) insig. 34 75
  Desulfovibrio vulgaris Hildenborough JW710 DVU3256 mutM formamidopyrimidine-DNA glycosylase (TIGR) insig. 35 75
  Mycobacterium tuberculosis H37Rv Rv3297 Probable endonuclease VIII Nei insig. 26 100
  Mycobacterium tuberculosis H37Rv Rv2464c Possible DNA glycosylase insig. 28 90
  Pantoea sp. MT58 IAI47_13775 endonuclease VIII insig. 25 100
  Rahnella sp. WP5 EX31_RS23405 endonuclease VIII insig. 27 100
  Mycobacterium tuberculosis H37Rv Rv0944 Possible formamidopyrimidine-DNA glycosylase (FAPY-DNA glycosylase) insig. 34 52
  Escherichia coli BL21 ECD_00674 endonuclease VIII and 5-formyluracil/5-hydroxymethyluracil DNA glycosylase insig. 24 100
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03003 Endonuclease 8 insig. 24 100
  Escherichia coli BW25113 b0714 nei endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase (NCBI) insig. 24 100
  Alteromonas macleodii MIT1002 MIT1002_02957 DNA glycosylase/AP lyase Nei insig. 25 53