Homologs of Atu0474 from Agrobacterium fabrum C58

putative RNA polymerase sigma-70 factor
SEED: RNA polymerase sigma-70 factor, ECF subfamily
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

250 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Agrobacterium fabrum C58 Atu0474 putative RNA polymerase sigma-70 factor insig. 100 100
o Variovorax sp. SCN45 GFF4503 RNA polymerase sigma factor insig. 47 99
o Pseudomonas syringae pv. syringae B728a Psyr_0362 Sigma-70 region 2 insig. 44 96
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0362 Sigma-70 region 2 insig. 44 96
o Bosea sp. OAE506 ABIE41_RS11620 sigma-70 family RNA polymerase sigma factor insig. 45 99
o Pseudomonas segetis P6 ACVTMO_RS06730 sigma-70 family RNA polymerase sigma factor insig. 44 96
o Pseudomonas simiae WCS417 PS417_12610 RNA polymerase sigma factor sig. 45 97
o Pseudomonas fluorescens SBW25 PFLU_RS13305 sigma-70 family RNA polymerase sigma factor insig. 45 96
o Pseudomonas fluorescens SBW25-INTG PFLU_RS13305 sigma-70 family RNA polymerase sigma factor sig. 45 96
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF365 RNA polymerase sigma factor insig. 48 98
o Pseudomonas putida KT2440 PP_3006 RNA polymerase sigma-70 factor, ECF subfamily insig. 46 98
o Pseudomonas orientalis W4I3 QF045_RS17270 sigma-70 family RNA polymerase sigma factor insig. 45 97
o Pseudomonas sp. DMC3 GFF1392 ECF RNA polymerase sigma factor SigK cofit 44 96
o Pseudomonas sp. BP01 JOY50_RS12975 sigma-70 family RNA polymerase sigma factor insig. 44 97
o Cupriavidus basilensis FW507-4G11 RR42_RS15915 RNA polymerase subunit sigma-24 insig. 46 91
  Ralstonia sp. UNC404CL21Col ABZR87_RS16160 sigma-70 family RNA polymerase sigma factor insig. 44 90
  Pseudomonas fluorescens SBW25 PFLU_RS16335 sigma-70 family RNA polymerase sigma factor insig. 40 97
  Pseudomonas fluorescens SBW25-INTG PFLU_RS16335 sigma-70 family RNA polymerase sigma factor insig. 40 97
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS04270 DNA-directed RNA polymerase sigma-70 factor insig. 44 90
  Ralstonia solanacearum UW163 UW163_RS09400 DNA-directed RNA polymerase sigma-70 factor insig. 44 90
o Ralstonia solanacearum GMI1000 RS_RS11855 DNA-directed RNA polymerase sigma-70 factor insig. 41 99
o Pseudomonas fluorescens FW300-N2E3 AO353_07625 RNA polymerase subunit sigma-70 insig. 42 97
o Ralstonia solanacearum PSI07 RPSI07_RS13090 DNA-directed RNA polymerase sigma-70 factor insig. 41 99
o Marinobacter adhaerens HP15 HP15_3899 RNA polymerase, sigma-24 subunit, ECF subfamily insig. 37 97
o Kangiella aquimarina DSM 16071 B158DRAFT_0930 RNA polymerase sigma factor, sigma-70 family insig. 37 93
  Rahnella sp. WP5 EX31_RS18905 sigma-70 family RNA polymerase sigma factor insig. 38 98
o Acidovorax sp. GW101-3H11 Ac3H11_1622 RNA polymerase sigma factor insig. 40 97
o Alteromonas macleodii MIT1002 MIT1002_03202 Sigma-K factor insig. 38 94
o Variovorax sp. OAS795 ABID97_RS08165 sigma-70 family RNA polymerase sigma factor insig. 39 91
  Variovorax sp. SCN45 GFF3817 RNA polymerase sigma factor insig. 39 90
  Marinobacter adhaerens HP15 HP15_p187g100 RNA polymerase sigma factor insig. 35 99
o Burkholderia phytofirmans PsJN BPHYT_RS22710 XRE family transcriptional regulator sig. 41 97
  Pseudomonas orientalis W4I3 QF045_RS00535 sigma-70 family RNA polymerase sigma factor cofit 41 97
  Enterobacter asburiae PDN3 EX28DRAFT_2390 RNA polymerase sigma factor, sigma-70 family cofit 36 94
  Rhodanobacter sp. FW510-T8 OKGIIK_05040 RNA polymerase subunit sigma insig. 34 98
  Acidovorax sp. GW101-3H11 Ac3H11_1599 RNA polymerase sigma factor insig. 35 100
  Rhodopseudomonas palustris CGA009 TX73_008400 sigma-70 family RNA polymerase sigma factor insig. 30 98
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1715 RNA polymerase sigma factor, sigma-70 family insig. 35 93
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS01495 sigma-70 family RNA polymerase sigma factor insig. 33 98
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3601.1 RNA polymerase sigma-70 factor insig. 35 99
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS08045 sigma-70 family RNA polymerase sigma factor cofit 37 91
  Rhizobium sp. OAE497 ABIE40_RS01975 sigma-70 family RNA polymerase sigma factor insig. 34 97
  Agrobacterium fabrum C58 Atu1982 sigma factor insig. 33 90
  Burkholderia phytofirmans PsJN BPHYT_RS21845 hypothetical protein insig. 37 90
  Pantoea sp. MT58 IAI47_19735 sigma-70 family RNA polymerase sigma factor insig. 36 91
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01465 RNA polymerase sigma-70 factor, ECF subfamily insig. 32 96
  Marinobacter adhaerens HP15 HP15_950 RNA polymerase, sigma-24 subunit, ECF subfamily insig. 27 98
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS24900 RNA polymerase subunit sigma-70 insig. 33 91
  Rhodopseudomonas palustris CGA009 TX73_002850 sigma-70 family RNA polymerase sigma factor insig. 30 92
  Bosea sp. OAE506 ABIE41_RS10280 sigma-70 family RNA polymerase sigma factor insig. 31 95
  Mycobacterium tuberculosis H37Rv Rv0445c Alternative RNA polymerase sigma factor SigK insig. 31 96
  Rhizobium sp. OAE497 ABIE40_RS18210 sigma-70 family RNA polymerase sigma factor insig. 33 94
  Rhodospirillum rubrum S1H Rru_A0722 Sigma-24 (FecI) (NCBI) insig. 31 92
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_02680 RNA polymerase subunit sigma-70 insig. 31 88
  Shewanella amazonensis SB2B Sama_2611 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 29 96
  Synechocystis sp000284455 PCC 6803 SGL_RS14165 sigma-70 family RNA polymerase sigma factor insig. 33 93
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS05845 sigma-70 family RNA polymerase sigma factor insig. 33 74
  Shewanella amazonensis SB2B Sama_2036 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 28 93
  Azospirillum sp. SherDot2 MPMX19_05214 ECF RNA polymerase sigma factor SigE insig. 31 96
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS18855 RNA polymerase sigma factor insig. 30 90
  Marinobacter adhaerens HP15 HP15_270 RNA polymerase, sigma-24 subunit, ECF subfamily cofit 33 88
  Synechococcus elongatus PCC 7942 Synpcc7942_2004 sigI RNA polymerase sigma factor insig. 29 91
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0358 RNA polymerase sigma factor, sigma-70 family strong 27 94
  Shewanella oneidensis MR-1 SO1986 RNA polymerase sigma-70 factor, ECF subfamily (NCBI ptt file) insig. 27 96
  Xanthobacter sp. DMC5 GFF1406 RNA polymerase sigma-H factor insig. 31 96
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS15905 RNA polymerase sigma factor cofit 27 94
  Castellaniella sp019104865 MT123 ABCV34_RS04710 sigma factor insig. 31 96
  Shewanella sp. ANA-3 Shewana3_2465 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 30 97
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3485 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 29 86
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12885 RNA polymerase insig. 25 94
  Variovorax sp. OAS795 ABID97_RS21865 sigma-70 family RNA polymerase sigma factor insig. 31 97
  Agrobacterium fabrum C58 Atu3084 RNA polymerase sigma factor insig. 31 99
  Rhodopseudomonas palustris CGA009 TX73_003315 RNA polymerase sigma factor insig. 33 95
  Phaeobacter inhibens DSM 17395 PGA1_c27510 'RNA polymerase sigma factor (sigma-70 family; ECF11 subgroup)' insig. 32 84
  Caulobacter crescentus NA1000 CCNA_00685 RNA polymerase sigma factor sig. 31 88
  Caulobacter crescentus NA1000 Δfur CCNA_00685 RNA polymerase sigma factor cofit 31 88
  Azospirillum sp. SherDot2 MPMX19_02022 ECF RNA polymerase sigma factor RpoE insig. 31 98
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4608 RNA polymerase sigma factor, sigma-70 family insig. 26 95
  Shewanella loihica PV-4 Shew_2956 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 27 98
  Herbaspirillum seropedicae SmR1 HSERO_RS09625 RNA polymerase sigma factor RpoE no data 29 91
  Rhodanobacter sp. FW510-T8 OKGIIK_07900 rpoE RNA polymerase sigma factor RpoE strong 28 98
  Cellulophaga baltica 18 M666_RS08870 RNA polymerase sigma factor insig. 28 89
  Shewanella sp. ANA-3 Shewana3_0763 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 27 99
  Azospirillum sp. SherDot2 MPMX19_05229 ECF RNA polymerase sigma factor RpoE insig. 27 90
  Azospirillum brasilense Sp245 AZOBR_RS00810 RNA polymerase sigma factor RpoE insig. 33 90
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS12005 RNA polymerase sigma factor RpoE no data 28 98
  Rhodanobacter denitrificans MT42 LRK55_RS05200 sigma-70 family RNA polymerase sigma factor insig. 30 92
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS05425 sigma-70 family RNA polymerase sigma factor insig. 30 92
  Rhodanobacter sp. FW510-T8 OKGIIK_13920 RNA polymerase subunit sigma insig. 27 93
  Caulobacter crescentus NA1000 CCNA_02837 RNA polymerase ECF-type sigma factor insig. 27 99
  Caulobacter crescentus NA1000 Δfur CCNA_02837 RNA polymerase ECF-type sigma factor cofit 27 99
  Azospirillum brasilense Sp245 AZOBR_RS21190 RNA polymerase sigma factor RpoE insig. 29 89
  Variovorax sp. SCN45 GFF2126 hypothetical protein no data 29 98
  Rhodanobacter denitrificans MT42 LRK55_RS16655 RNA polymerase sigma factor RpoE no data 27 98
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS16940 RNA polymerase sigma factor RpoE strong 27 98
  Dinoroseobacter shibae DFL-12 Dshi_2428 RNA polymerase, sigma-24 subunit, ECF subfamily (RefSeq) insig. 26 97
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS12920 RNA polymerase sigma-70 factor cofit 31 97
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02732 RNA polymerase sigma-70 factor, ECF subfamily insig. 31 94
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS04580 sigma-70 family RNA polymerase sigma factor insig. 30 99
  Cellulophaga baltica 18 M666_RS18525 RNA polymerase sigma factor insig. 27 88
  Shewanella oneidensis MR-1 SO3840 RNA polymerase sigma-70 factor, ECF subfamily (NCBI ptt file) insig. 25 96
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS03570 RNA polymerase sigma-70 factor insig. 27 97
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS00160 hypothetical protein insig. 30 92
  Pseudomonas sp. S08-1 OH686_11525 hypothetical protein cofit 30 90
  Phaeobacter inhibens DSM 17395 PGA1_c08510 RNA polymerase sigma factor (ECF01 subgroup, ECF20 subgroup) insig. 29 100
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS07180 RNA polymerase sigma factor RpoE strong 28 97
  Azospirillum sp. SherDot2 MPMX19_05742 hypothetical protein insig. 29 93
  Rhodanobacter denitrificans MT42 LRK55_RS07240 sigma-70 family RNA polymerase sigma factor insig. 27 99
  Bacteroides ovatus ATCC 8483 BACOVA_00284 RNA polymerase sigma-70 factor insig. 26 94
  Variovorax sp. OAS795 ABID97_RS24815 sigma-70 family RNA polymerase sigma factor insig. 29 97
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0603 RNA polymerase sigma factor, sigma-70 family sig. 26 94
  Phocaeicola dorei CL03T12C01 ABI39_RS03415 RNA polymerase sigma-70 factor insig. 26 98
  Paraburkholderia graminis OAS925 ABIE53_005321 RNA polymerase sigma factor (sigma-70 family) sig. 31 94
  Shewanella loihica PV-4 Shew_1476 RNA polymerase sigma factor (RefSeq) insig. 26 90
  Alteromonas macleodii MIT1002 MIT1002_02682 Sigma-W factor strong 31 84
  Rhizobium sp. OAE497 ABIE40_RS26955 sigma-70 family RNA polymerase sigma factor insig. 29 97
  Bacteroides thetaiotaomicron VPI-5482 BT0188 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 29 88
  Alteromonas macleodii MIT1002 MIT1002_02719 Sigma-24 no data 27 91
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS07500 sigma-70 family RNA polymerase sigma factor insig. 27 99
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS03685 sigma-70 family RNA polymerase sigma factor insig. 35 72
  Rhodospirillum rubrum S1H Rru_A2537 Sigma-24 (FecI) (NCBI) insig. 30 97
  Rhodopseudomonas palustris CGA009 TX73_009355 sigma-70 family RNA polymerase sigma factor insig. 27 91
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_11515 RNA polymerase sigma-70 factor insig. 27 96
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS04025 RNA polymerase sigma factor insig. 24 99
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS07365 RNA polymerase sigma factor insig. 29 99
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4220 RNA polymerase sigma factor RpoE insig. 27 84
  Dinoroseobacter shibae DFL-12 Dshi_0366 RNA polymerase, sigma-24 subunit, ECF subfamily (RefSeq) insig. 30 92
  Mycobacterium tuberculosis H37Rv Rv1221 Alternative RNA polymerase sigma factor SigE insig. 28 92
  Ralstonia sp. UNC404CL21Col ABZR87_RS10165 RNA polymerase sigma factor RpoE strong 27 91
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS14445 RNA polymerase sigma factor RpoE strong 27 91
  Ralstonia solanacearum GMI1000 RS_RS05225 RNA polymerase sigma factor RpoE strong 27 91
  Ralstonia solanacearum PSI07 RPSI07_RS19015 RNA polymerase sigma factor RpoE strong 27 91
  Ralstonia solanacearum UW163 UW163_RS11910 RNA polymerase sigma factor RpoE insig. 27 91
  Azospirillum brasilense Sp245 AZOBR_RS31600 RNA polymerase insig. 31 92
  Pseudomonas fluorescens SBW25 PFLU_RS12745 RNA polymerase sigma factor insig. 29 94
  Pseudomonas fluorescens SBW25-INTG PFLU_RS12745 RNA polymerase sigma factor insig. 29 94
  Magnetospirillum magneticum AMB-1 AMB_RS14160 RNA polymerase sigma factor cofit 29 100
  Bosea sp. OAE506 ABIE41_RS07610 sigma-70 family RNA polymerase sigma factor insig. 28 85
  Pseudomonas stutzeri RCH2 Psest_3456 RNA polymerase sigma factor, sigma-70 family insig. 28 90
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS09110 RNA polymerase sigma-70 factor sig. 26 99
  Xanthobacter sp. DMC5 GFF223 hypothetical protein insig. 25 92
  Variovorax sp. OAS795 ABID97_RS08330 RNA polymerase sigma factor RpoE strong 29 88
  Cupriavidus basilensis FW507-4G11 RR42_RS14080 RNA polymerase sigma factor RpoE strong 26 88
  Lysobacter sp. OAE881 ABIE51_RS16295 sigma-70 family RNA polymerase sigma factor insig. 31 96
  Dechlorosoma suillum PS Dsui_2453 RNA polymerase sigma factor RpoE no data 28 94
  Bacteroides stercoris CC31F HMPREF1181_RS04900 RNA polymerase sigma-70 factor insig. 30 96
  Vibrio cholerae E7946 ATCC 55056 CSW01_11715 RNA polymerase subunit sigma insig. 29 90
  Shewanella oneidensis MR-1 SO1342 rpoE RNA polymerase sigma-24 factor (NCBI ptt file) no data 28 88
  Kangiella aquimarina DSM 16071 B158DRAFT_0015 RNA polymerase sigma factor, sigma-70 family insig. 35 73
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS17460 RNA polymerase sigma-70 factor insig. 26 88
  Castellaniella sp019104865 MT123 ABCV34_RS08355 RNA polymerase sigma factor RpoE strong 25 88
  Pseudomonas aeruginosa MRSN321 DY961_RS02510 sbrI;inference=COORDINATES ECF family RNA polymerase sigma factor SbrI insig. 30 94
  Pseudomonas aeruginosa PUPa3 DQ20_RS33080 sbrI;inference=COORDINATES ECF family RNA polymerase sigma factor SbrI insig. 30 94
  Bacteroides ovatus ATCC 8483 BACOVA_01251 RNA polymerase sigma-70 factor sig. 27 91
  Bacteroides ovatus ATCC 8483 BACOVA_02037 RNA polymerase sigma-70 factor insig. 22 96
  Pseudomonas aeruginosa PA14 IKLFDK_14715 ECF family RNA polymerase sigma factor SbrI insig. 30 94
  Burkholderia phytofirmans PsJN BPHYT_RS24975 RNA polymerase sigma24 factor strong 28 94
  Phaeobacter inhibens DSM 17395 PGA1_c27070 RNA polymerase sigma factor 70 (ECF15 subgroup, ECF26 subgroup) insig. 28 82
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS07720 sigma-70 family RNA polymerase sigma factor strong 27 90
  Cupriavidus basilensis FW507-4G11 RR42_RS05810 RNA polymerase sigma factor insig. 27 97
  Paraburkholderia sabiae LMG 24235 QEN71_RS04575 RNA polymerase sigma factor RpoE strong 27 88
  Shewanella sp. ANA-3 Shewana3_3032 RNA polymerase sigma factor RpoE (RefSeq) no data 27 88
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS05665 RNA polymerase sigma-70 factor insig. 25 99
  Pseudomonas simiae WCS417 PS417_11995 RNA polymerase sigma factor insig. 30 91
  Pseudomonas syringae pv. syringae B728a Psyr_0892 Sigma-70 region 2:Sigma-70 region 4 insig. 28 94
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0892 Sigma-70 region 2:Sigma-70 region 4 insig. 28 94
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS12340 RNA polymerase sigma-70 factor cofit 28 85
  Burkholderia phytofirmans PsJN BPHYT_RS14405 RNA polymerase sigma factor RpoE no data 26 88
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04355 RNA polymerase, sigma-24 subunit, RpoE no data 26 88
  Paraburkholderia graminis OAS925 ABIE53_003043 RNA polymerase sigma-70 factor (ECF subfamily) strong 26 88
  Azospirillum sp. SherDot2 MPMX19_04274 RNA polymerase sigma-H factor insig. 41 44
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS05195 sigma-70 family RNA polymerase sigma factor insig. 31 83
  Variovorax sp. SCN45 GFF4544 RNA polymerase sigma factor RpoE insig. 31 86
  Bacteroides ovatus ATCC 8483 BACOVA_00669 Sigma-70 region 2 insig. 29 72
  Phocaeicola dorei CL03T12C01 ABI39_RS00235 sigma-70 family RNA polymerase sigma factor sig. 27 90
  Shewanella loihica PV-4 Shew_1048 RNA polymerase sigma factor RpoE (RefSeq) cofit 26 88
  Phocaeicola dorei CL03T12C01 ABI39_RS08620 RNA polymerase sigma-70 factor insig. 24 99
  Shewanella sp. ANA-3 Shewana3_3152 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) cofit 26 91
  Rhodanobacter denitrificans MT42 LRK55_RS04975 sigma-70 family RNA polymerase sigma factor cofit 32 83
  Acidovorax sp. GW101-3H11 Ac3H11_1573 RNA polymerase sigma factor RpoE no data 29 96
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS00075 RNA polymerase sigma factor cofit 27 93
  Xanthobacter sp. DMC5 GFF3078 ECF RNA polymerase sigma factor RpoE insig. 27 86
  Bacteroides ovatus ATCC 8483 BACOVA_00842 RNA polymerase sigma-70 factor insig. 23 89
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS13725 sigma-70 family RNA polymerase sigma factor strong 27 92
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2891 RNA polymerase sigma factor, sigma-70 family insig. 26 91
  Phocaeicola dorei CL03T12C01 ABI39_RS02030 RNA polymerase sigma-70 factor insig. 26 96
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS16905 sigma-70 family RNA polymerase sigma factor insig. 27 91
  Alteromonas macleodii MIT1002 MIT1002_03807 Sigma-W factor insig. 23 93
  Pseudomonas simiae WCS417 PS417_00810 RNA polymerase sigma factor insig. 30 99
  Klebsiella michiganensis M5al BWI76_RS21355 RNA polymerase sigma factor RpoE no data 28 88
  Cellulophaga baltica 18 M666_RS08305 RNA polymerase sigma factor insig. 26 90
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2751 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 25 91
  Cellulophaga baltica 18 M666_RS11420 RNA polymerase sigma factor insig. 22 98
  Bacteroides thetaiotaomicron VPI-5482 BT2044 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 29 70
  Mycobacterium tuberculosis H37Rv Rv3223c Alternative RNA polymerase sigma-E factor (sigma-24) SigH (RPOE) insig. 27 92
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19085 RNA polymerase subunit sigma-24 insig. 27 95
  Azospirillum brasilense Sp245 AZOBR_RS28490 hypothetical protein sig. 23 90
  Bacteroides thetaiotaomicron VPI-5482 BT4705 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 25 86
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS19950 RNA polymerase subunit sigma-24 insig. 27 92
  Rhodopseudomonas palustris CGA009 TX73_024905 sigma-70 family RNA polymerase sigma factor insig. 27 91
  Kangiella aquimarina DSM 16071 B158DRAFT_2027 RNA polymerase sigma factor, sigma-70 family insig. 26 96
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS11460 hypothetical protein insig. 24 84
  Pseudomonas segetis P6 ACVTMO_RS06940 rpoE RNA polymerase sigma factor RpoE strong 24 91
  Pseudomonas fluorescens SBW25 PFLU_RS00840 RNA polymerase sigma factor insig. 30 99
  Pseudomonas fluorescens SBW25-INTG PFLU_RS00840 RNA polymerase sigma factor sig. 30 99
  Caulobacter crescentus NA1000 CCNA_01721 RNA polymerase ECF sigma factor sig. 29 100
  Caulobacter crescentus NA1000 Δfur CCNA_01721 RNA polymerase ECF sigma factor insig. 29 100
  Methylophilus sp. DMC18 GFF2730 RNA polymerase sigma-H factor no data 29 97
  Variovorax sp. SCN45 GFF3863 RNA polymerase sigma factor RpoE insig. 27 88
  Dinoroseobacter shibae DFL-12 Dshi_3835 RNA polymerase, sigma-24 subunit, ECF subfamily (RefSeq) insig. 27 80
  Mycobacterium tuberculosis H37Rv Rv0735 Probable alternative RNA polymerase sigma factor SigL insig. 30 87
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS14245 RNA polymerase sigma-70 factor insig. 23 90
  Bacteroides ovatus ATCC 8483 BACOVA_02205 Sigma-70 region 2 sig. 30 80
  Rhodanobacter sp. FW510-T8 OKGIIK_01380 rpoE RNA polymerase subunit sigma-24 insig. 30 73
  Pseudomonas orientalis W4I3 QF045_RS03845 RNA polymerase sigma factor insig. 29 99
  Phocaeicola dorei CL03T12C01 ABI39_RS12815 sigma-70 family RNA polymerase sigma factor insig. 27 91
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS13700 hypothetical protein insig. 26 97
  Bacteroides thetaiotaomicron VPI-5482 BT3277 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 29 88
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS13360 RNA polymerase sigma-70 factor insig. 27 89
  Lysobacter sp. OAE881 ABIE51_RS13890 RNA polymerase sigma factor RpoE strong 27 94
  Rhodopseudomonas palustris CGA009 TX73_023085 RNA polymerase sigma factor cofit 31 81
  Klebsiella pneumoniae MKP103 KDGMDA_28480 RNA polymerase sigma factor RpoE no data 28 88
  Klebsiella pneumoniae MRSN742743 KFA93_RS04695 rpoE;go_function=DNA RNA polymerase sigma factor RpoE no data 28 88
  Kangiella aquimarina DSM 16071 B158DRAFT_2180 RNA polymerase, sigma-24 subunit, RpoE strong 24 97
  Bacteroides ovatus ATCC 8483 BACOVA_04399 Sigma-70 region 2 insig. 22 94
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19605 RNA polymerase insig. 29 92
  Bacteroides thetaiotaomicron VPI-5482 BT3457 RNA polymerase ECF-type sigma factor (NCBI ptt file) strong 28 80
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3681.1 RNA polymerase sigma factor RpoE insig. 28 96
  Pseudomonas aeruginosa MRSN321 DY961_RS08690 rpoE;go_component=cytoplasm|0005737||IEA;go_function=sigma RNA polymerase sigma factor RpoE strong 23 91
  Pseudomonas aeruginosa PA14 IKLFDK_03265 alginate biosynthesis protein AlgZ/FimS strong 23 91
  Pseudomonas aeruginosa PUPa3 DQ20_RS44160 rpoE;go_component=cytoplasm|0005737||IEA;go_function=sigma RNA polymerase sigma factor RpoE strong 23 91
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS04435 RNA polymerase sigma factor insig. 22 96
  Azospirillum brasilense Sp245 AZOBR_RS10625 RNA polymerase sigma-70 factor insig. 32 85
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0287 RNA polymerase sigma factor, sigma-70 family strong 22 86
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4018 RNA polymerase sigma-E factor insig. 29 99
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00391 RNA polymerase sigma-H factor cofit 27 98
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS05630 RNA polymerase sigma-70 factor sig. 26 76
  Shewanella amazonensis SB2B Sama_1068 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 26 92
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS24305 hypothetical protein sig. 23 93
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_14945 RNA polymerase subunit sigma-24 strong 27 99
  Fusobacterium nucleatum SB010 HUW76_07635 RNA polymerase sigma factor no data 23 83
  Azospirillum brasilense Sp245 AZOBR_RS06360 RNA polymerase subunit sigma-24 no data 30 78
  Rhizobium sp. OAE497 ABIE40_RS11455 RNA polymerase sigma factor insig. 29 69
  Marinobacter adhaerens HP15 HP15_775 RNA polymerase sigma-70 RpoE type insig. 26 88
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS07715 RNA polymerase sigma factor no data 29 80
  Azospirillum sp. SherDot2 MPMX19_05475 hypothetical protein no data 27 81
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4205 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 27 86
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_06740 hypothetical protein insig. 25 80
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3339 RNA polymerase sigma factor RpoE cofit 28 85
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_05685 RNA polymerase subunit sigma-70 insig. 28 92