Homologs of ABIE53_003339 from Paraburkholderia graminis OAS925

ATP-dependent Clp protease protease subunit
SEED: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)
KEGG: ATP-dependent Clp protease, protease subunit

Top 100 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Paraburkholderia graminis OAS925 ABIE53_003339 ATP-dependent Clp protease protease subunit insig. 100 100
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04105 ATP-dependent Clp protease proteolytic subunit ClpP insig. 92 100
o Burkholderia phytofirmans PsJN BPHYT_RS15840 Clp protease proteolytic subunit ClpP insig. 91 98
o Paraburkholderia sabiae LMG 24235 QEN71_RS02860 ATP-dependent Clp endopeptidase proteolytic subunit ClpP insig. 84 93
  Herbaspirillum seropedicae SmR1 HSERO_RS12915 Clp protease proteolytic subunit ClpP no data 73 93
o Castellaniella sp019104865 MT123 ABCV34_RS05135 ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 77 89
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS01350 ATP-dependent Clp protease proteolytic subunit no data 72 93
  Ralstonia solanacearum GMI1000 RS_RS08645 ATP-dependent Clp protease proteolytic subunit no data 72 93
  Ralstonia solanacearum PSI07 RPSI07_RS16125 ATP-dependent Clp protease proteolytic subunit insig. 72 93
  Ralstonia solanacearum UW163 UW163_RS14660 ATP-dependent Clp protease proteolytic subunit no data 72 93
  Ralstonia sp. UNC404CL21Col ABZR87_RS12795 ATP-dependent Clp endopeptidase proteolytic subunit ClpP strong 71 92
  Cupriavidus basilensis FW507-4G11 RR42_RS09020 Clp protease ClpP no data 71 93
  Burkholderia phytofirmans PsJN BPHYT_RS09450 ATP-dependent Clp protease proteolytic subunit 2 no data 73 88
  Paraburkholderia sabiae LMG 24235 QEN71_RS21985 ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 73 88
  Acidovorax sp. GW101-3H11 Ac3H11_935 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) no data 71 89
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00896 ATP-dependent Clp protease proteolytic subunit ClpP sig. 73 88
  Paraburkholderia graminis OAS925 ABIE53_002115 ATP-dependent Clp protease protease subunit strong 73 88
  Rhodanobacter denitrificans MT42 LRK55_RS16450 ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 69 90
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS16725 ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 69 90
  Dechlorosoma suillum PS Dsui_2196 ATP-dependent Clp protease, proteolytic subunit ClpP strong 69 92
  Rhodanobacter sp. FW510-T8 OKGIIK_08040 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 69 90
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4042 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) strong 68 89
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3945 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) no data 70 89
  Variovorax sp. OAS795 ABID97_RS17600 ATP-dependent Clp endopeptidase proteolytic subunit ClpP strong 68 90
  Pseudomonas simiae WCS417 PS417_17235 Clp protease ClpP no data 69 89
  Variovorax sp. SCN45 GFF489 ATP-dependent Clp protease proteolytic subunit ClpP (EC 3.4.21.92) strong 67 92
  Pseudomonas fluorescens SBW25 PFLU_RS19170 ATP-dependent Clp endopeptidase proteolytic subunit ClpP strong 69 89
  Pseudomonas fluorescens SBW25-INTG PFLU_RS19170 ATP-dependent Clp endopeptidase proteolytic subunit ClpP strong 69 89
  Lysobacter sp. OAE881 ABIE51_RS14155 ATP-dependent Clp endopeptidase proteolytic subunit ClpP strong 69 88
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS07330 ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 65 90
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2552 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) strong 70 86
  Pseudomonas syringae pv. syringae B728a Psyr_1747 ATP-dependent Clp protease proteolytic subunit ClpP strong 68 88
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1747 ATP-dependent Clp protease proteolytic subunit ClpP sig. 68 88
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4048.1 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) no data 68 89
  Pseudomonas fluorescens FW300-N2E3 AO353_20175 ATP-dependent Clp protease proteolytic subunit strong 68 88
  Pseudomonas sp. RS175 PFR28_01228 ATP-dependent Clp protease proteolytic subunit no data 67 88
  Pseudomonas fluorescens FW300-N2C3 AO356_01750 ATP-dependent Clp protease proteolytic subunit strong 67 88
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2218 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) strong 67 88
  Acinetobacter radioresistens SK82 MPMX26_00408 ATP-dependent Clp protease proteolytic subunit strong 66 91
  Alteromonas macleodii MIT1002 MIT1002_02760 ATP-dependent Clp protease proteolytic subunit precursor strong 66 88
  Pseudomonas putida KT2440 PP_2300 ATP-dependent Clp protease proteolytic subunit no data 67 88
  Marinobacter adhaerens HP15 HP15_2185 ATP-dependent Clp protease, proteolytic subunit ClpP no data 65 89
  Shewanella loihica PV-4 Shew_2508 clpP ATP-dependent Clp protease proteolytic subunit (RefSeq) insig. 67 87
  Shewanella sp. ANA-3 Shewana3_2661 clpP ATP-dependent Clp protease proteolytic subunit (RefSeq) strong 67 88
  Shewanella oneidensis MR-1 SO1794 clpP ATP-dependent Clp protease, proteolytic subunit (NCBI ptt file) strong 67 88
  Rhodospirillum rubrum S1H Rru_A1550 Endopeptidase Clp (NCBI) no data 67 88
  Shewanella amazonensis SB2B Sama_1224 clpP ATP-dependent Clp protease proteolytic subunit (RefSeq) strong 65 87
  Erwinia tracheiphila SCR3 LU632_RS18345 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 63 88
  Vibrio cholerae E7946 ATCC 55056 CSW01_09615 ATP-dependent Clp endopeptidase, proteolytic subunit ClpP no data 66 88
  Pseudomonas stutzeri RCH2 Psest_2287 ATP-dependent Clp protease, proteolytic subunit ClpP no data 66 88
  Pantoea sp. MT58 IAI47_14655 ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 63 88
  Enterobacter sp. TBS_079 MPMX20_01028 ATP-dependent Clp protease proteolytic subunit cofit 63 88
  Magnetospirillum magneticum AMB-1 AMB_RS14045 ATP-dependent Clp endopeptidase, proteolytic subunit ClpP no data 62 91
  Klebsiella michiganensis M5al BWI76_RS06525 ATP-dependent Clp protease proteolytic subunit strong 63 88
  Azospirillum sp. SherDot2 MPMX19_01548 ATP-dependent Clp protease proteolytic subunit no data 64 90
  Azospirillum brasilense Sp245 AZOBR_RS07135 ATP-dependent Clp protease proteolytic subunit no data 66 87
  Dickeya dadantii 3937 DDA3937_RS05640 ATP-dependent Clp endopeptidase proteolytic subunit ClpP strong 63 88
  Kangiella aquimarina DSM 16071 B158DRAFT_1034 ATP-dependent Clp protease, proteolytic subunit ClpP strong 63 88
o Agrobacterium fabrum C58 Atu1258 ATP-dependent Clp protease, proteolytic subunit strong 58 93
  Rahnella sp. WP5 EX31_RS22245 ATP-dependent Clp endopeptidase proteolytic subunit ClpP strong 62 89
  Dickeya dianthicola 67-19 HGI48_RS05685 ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 63 88
  Dickeya dianthicola ME23 DZA65_RS06010 ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 63 88
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4353 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) strong 62 88
  Enterobacter asburiae PDN3 EX28DRAFT_2534 ATP-dependent Clp endopeptidase, proteolytic subunit ClpP no data 62 88
  Serratia liquefaciens MT49 IAI46_05010 ATP-dependent Clp endopeptidase proteolytic subunit ClpP cofit 62 88
  Synechococcus elongatus PCC 7942 Synpcc7942_1554 clpP1 ATP-dependent Clp protease proteolytic subunit no data 64 88
  Escherichia coli BL21 ECD_00388 proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine proteases strong 62 88
  Escherichia fergusonii Becca EFB2_03620 ATP-dependent Clp protease proteolytic subunit sig. 62 88
  Escherichia coli ECOR27 NOLOHH_01270 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP cofit 62 88
  Escherichia coli ECOR38 HEPCGN_06950 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP strong 62 88
  Escherichia coli ECRC100 OKFHMN_08335 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 62 88
  Escherichia coli ECRC101 MCAODC_27560 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP sig. 62 88
  Escherichia coli ECRC102 NIAGMN_06390 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP strong 62 88
  Escherichia coli ECRC62 BNILDI_22685 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP strong 62 88
  Escherichia coli ECRC98 JDDGAC_11990 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP cofit 62 88
  Escherichia coli ECRC99 KEDOAH_19630 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 62 88
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03236 ATP-dependent Clp protease proteolytic subunit strong 62 88
  Escherichia coli Nissle 1917 ECOLIN_RS02625 ATP-dependent Clp endopeptidase proteolytic subunit ClpP strong 62 88
  Escherichia coli BW25113 b0437 clpP ATP-dependent Clp protease proteolytic subunit (NCBI) strong 62 88
o Rhizobium sp. OAE497 ABIE40_RS07090 ATP-dependent Clp endopeptidase proteolytic subunit ClpP sig. 58 94
  Pectobacterium carotovorum WPP14 HER17_RS15850 ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 62 88
  Synechococcus elongatus PCC 7942 Synpcc7942_2525 clpPII ATP-dependent Clp protease proteolytic subunit ClpP strong 65 86
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0094 Protease subunit of ATP-dependent Clp proteases no data 63 90
o Bosea sp. OAE506 ABIE41_RS18060 ATP-dependent Clp protease proteolytic subunit no data 64 90
  Desulfovibrio vulgaris Hildenborough JW710 DVU1335 clpP ATP-dependent Clp protease, proteolytic subunit (TIGR) strong 65 87
  Sinorhizobium meliloti 1021 SMc01903 ATP-dependent Clp protease proteolytic subunit no data 59 92
  Pseudomonas sp. S08-1 OH686_03645 ATP-dependent Clp endopeptidase, proteolytic subunit ClpP no data 65 88
  Caulobacter crescentus NA1000 CCNA_02041 ATP-dependent endopeptidase clp, proteolytic subunit ClpP no data 61 92
  Caulobacter crescentus NA1000 Δfur CCNA_02041 ATP-dependent endopeptidase clp, proteolytic subunit ClpP no data 61 92
o Dinoroseobacter shibae DFL-12 Dshi_1388 Endopeptidase Clp (RefSeq) no data 59 93
  Rhodopseudomonas palustris CGA009 TX73_015355 ATP-dependent Clp protease proteolytic subunit no data 60 90
o Phaeobacter inhibens DSM 17395 PGA1_c12520 ATP-dependent Clp protease proteolytic subunit no data 61 89
  Desulfovibrio vulgaris Miyazaki F DvMF_0110 ATP-dependent Clp protease, proteolytic subunit ClpP (RefSeq) insig. 64 87
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS06490 ATP-dependent Clp protease proteolytic subunit no data 57 94
  Fusobacterium nucleatum SB010 HUW76_01055 ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 58 85
  Agrobacterium fabrum C58 Atu1627 ATP-dependent Clp protease, proteolytic subunit insig. 57 88
  Sinorhizobium meliloti 1021 SMc03841 ATP-dependent Clp protease proteolytic subunit insig. 56 89
  Rhizobium sp. OAE497 ABIE40_RS04460 ATP-dependent Clp protease proteolytic subunit insig. 57 89
  Serratia liquefaciens MT49 IAI46_10225 ATP-dependent Clp protease proteolytic subunit insig. 58 87
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS04270 ATP-dependent Clp protease proteolytic subunit no data 52 88