Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Paraburkholderia graminis OAS925 | ABIE53_003339 | | ATP-dependent Clp protease protease subunit | insig. | 100 | 100 |
o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_04105 | | ATP-dependent Clp protease proteolytic subunit ClpP | insig. | 92 | 100 |
o | Burkholderia phytofirmans PsJN | BPHYT_RS15840 | | Clp protease proteolytic subunit ClpP | insig. | 91 | 98 |
o | Paraburkholderia sabiae LMG 24235 | QEN71_RS02860 | | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | insig. | 84 | 93 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS12915 | | Clp protease proteolytic subunit ClpP | no data | 73 | 93 |
o | Castellaniella sp019104865 MT123 | ABCV34_RS05135 | | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | no data | 77 | 89 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS01350 | | ATP-dependent Clp protease proteolytic subunit | no data | 72 | 93 |
| Ralstonia solanacearum GMI1000 | RS_RS08645 | | ATP-dependent Clp protease proteolytic subunit | no data | 72 | 93 |
| Ralstonia solanacearum PSI07 | RPSI07_RS16125 | | ATP-dependent Clp protease proteolytic subunit | insig. | 72 | 93 |
| Ralstonia solanacearum UW163 | UW163_RS14660 | | ATP-dependent Clp protease proteolytic subunit | no data | 72 | 93 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS12795 | | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | strong | 71 | 92 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS09020 | | Clp protease ClpP | no data | 71 | 93 |
| Burkholderia phytofirmans PsJN | BPHYT_RS09450 | | ATP-dependent Clp protease proteolytic subunit 2 | no data | 73 | 88 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS21985 | | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | no data | 73 | 88 |
| Acidovorax sp. GW101-3H11 | Ac3H11_935 | | ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) | no data | 71 | 89 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00896 | | ATP-dependent Clp protease proteolytic subunit ClpP | sig. | 73 | 88 |
| Paraburkholderia graminis OAS925 | ABIE53_002115 | | ATP-dependent Clp protease protease subunit | strong | 73 | 88 |
| Rhodanobacter denitrificans MT42 | LRK55_RS16450 | | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | no data | 69 | 90 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS16725 | | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | no data | 69 | 90 |
| Dechlorosoma suillum PS | Dsui_2196 | | ATP-dependent Clp protease, proteolytic subunit ClpP | strong | 69 | 92 |
| Rhodanobacter sp. FW510-T8 | OKGIIK_08040 | clpP | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | no data | 69 | 90 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4042 | | ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) | strong | 68 | 89 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3945 | | ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) | no data | 70 | 89 |
| Variovorax sp. OAS795 | ABID97_RS17600 | | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | strong | 68 | 90 |
| Pseudomonas simiae WCS417 | PS417_17235 | | Clp protease ClpP | no data | 69 | 89 |
| Variovorax sp. SCN45 | GFF489 | | ATP-dependent Clp protease proteolytic subunit ClpP (EC 3.4.21.92) | strong | 67 | 92 |
| Pseudomonas fluorescens SBW25 | PFLU_RS19170 | | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | strong | 69 | 89 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS19170 | | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | strong | 69 | 89 |
| Lysobacter sp. OAE881 | ABIE51_RS14155 | | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | strong | 69 | 88 |
| Dyella japonica UNC79MFTsu3.2 | ABZR86_RS07330 | | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | no data | 65 | 90 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_2552 | | ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) | strong | 70 | 86 |
| Pseudomonas syringae pv. syringae B728a | Psyr_1747 | | ATP-dependent Clp protease proteolytic subunit ClpP | strong | 68 | 88 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1747 | | ATP-dependent Clp protease proteolytic subunit ClpP | sig. | 68 | 88 |
| Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.4048.1 | | ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) | no data | 68 | 89 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_20175 | | ATP-dependent Clp protease proteolytic subunit | strong | 68 | 88 |
| Pseudomonas sp. RS175 | PFR28_01228 | | ATP-dependent Clp protease proteolytic subunit | no data | 67 | 88 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_01750 | | ATP-dependent Clp protease proteolytic subunit | strong | 67 | 88 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2218 | | ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) | strong | 67 | 88 |
| Acinetobacter radioresistens SK82 | MPMX26_00408 | | ATP-dependent Clp protease proteolytic subunit | strong | 66 | 91 |
| Alteromonas macleodii MIT1002 | MIT1002_02760 | | ATP-dependent Clp protease proteolytic subunit precursor | strong | 66 | 88 |
| Pseudomonas putida KT2440 | PP_2300 | | ATP-dependent Clp protease proteolytic subunit | no data | 67 | 88 |
| Marinobacter adhaerens HP15 | HP15_2185 | | ATP-dependent Clp protease, proteolytic subunit ClpP | no data | 65 | 89 |
| Shewanella loihica PV-4 | Shew_2508 | clpP | ATP-dependent Clp protease proteolytic subunit (RefSeq) | insig. | 67 | 87 |
| Shewanella sp. ANA-3 | Shewana3_2661 | clpP | ATP-dependent Clp protease proteolytic subunit (RefSeq) | strong | 67 | 88 |
| Shewanella oneidensis MR-1 | SO1794 | clpP | ATP-dependent Clp protease, proteolytic subunit (NCBI ptt file) | strong | 67 | 88 |
| Rhodospirillum rubrum S1H | Rru_A1550 | | Endopeptidase Clp (NCBI) | no data | 67 | 88 |
| Shewanella amazonensis SB2B | Sama_1224 | clpP | ATP-dependent Clp protease proteolytic subunit (RefSeq) | strong | 65 | 87 |
| Erwinia tracheiphila SCR3 | LU632_RS18345 | clpP | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | no data | 63 | 88 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_09615 | | ATP-dependent Clp endopeptidase, proteolytic subunit ClpP | no data | 66 | 88 |
| Pseudomonas stutzeri RCH2 | Psest_2287 | | ATP-dependent Clp protease, proteolytic subunit ClpP | no data | 66 | 88 |
| Pantoea sp. MT58 | IAI47_14655 | | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | no data | 63 | 88 |
| Enterobacter sp. TBS_079 | MPMX20_01028 | | ATP-dependent Clp protease proteolytic subunit | cofit | 63 | 88 |
| Magnetospirillum magneticum AMB-1 | AMB_RS14045 | | ATP-dependent Clp endopeptidase, proteolytic subunit ClpP | no data | 62 | 91 |
| Klebsiella michiganensis M5al | BWI76_RS06525 | | ATP-dependent Clp protease proteolytic subunit | strong | 63 | 88 |
| Azospirillum sp. SherDot2 | MPMX19_01548 | | ATP-dependent Clp protease proteolytic subunit | no data | 64 | 90 |
| Azospirillum brasilense Sp245 | AZOBR_RS07135 | | ATP-dependent Clp protease proteolytic subunit | no data | 66 | 87 |
| Dickeya dadantii 3937 | DDA3937_RS05640 | | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | strong | 63 | 88 |
| Kangiella aquimarina DSM 16071 | B158DRAFT_1034 | | ATP-dependent Clp protease, proteolytic subunit ClpP | strong | 63 | 88 |
o | Agrobacterium fabrum C58 | Atu1258 | | ATP-dependent Clp protease, proteolytic subunit | strong | 58 | 93 |
| Rahnella sp. WP5 | EX31_RS22245 | | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | strong | 62 | 89 |
| Dickeya dianthicola 67-19 | HGI48_RS05685 | | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | no data | 63 | 88 |
| Dickeya dianthicola ME23 | DZA65_RS06010 | | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | no data | 63 | 88 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF4353 | | ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) | strong | 62 | 88 |
| Enterobacter asburiae PDN3 | EX28DRAFT_2534 | | ATP-dependent Clp endopeptidase, proteolytic subunit ClpP | no data | 62 | 88 |
| Serratia liquefaciens MT49 | IAI46_05010 | | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | cofit | 62 | 88 |
| Synechococcus elongatus PCC 7942 | Synpcc7942_1554 | clpP1 | ATP-dependent Clp protease proteolytic subunit | no data | 64 | 88 |
| Escherichia coli BL21 | ECD_00388 | | proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine proteases | strong | 62 | 88 |
| Escherichia fergusonii Becca | EFB2_03620 | | ATP-dependent Clp protease proteolytic subunit | sig. | 62 | 88 |
| Escherichia coli ECOR27 | NOLOHH_01270 | clpP | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | cofit | 62 | 88 |
| Escherichia coli ECOR38 | HEPCGN_06950 | clpP | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | strong | 62 | 88 |
| Escherichia coli ECRC100 | OKFHMN_08335 | clpP | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | no data | 62 | 88 |
| Escherichia coli ECRC101 | MCAODC_27560 | clpP | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | sig. | 62 | 88 |
| Escherichia coli ECRC102 | NIAGMN_06390 | clpP | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | strong | 62 | 88 |
| Escherichia coli ECRC62 | BNILDI_22685 | clpP | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | strong | 62 | 88 |
| Escherichia coli ECRC98 | JDDGAC_11990 | clpP | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | cofit | 62 | 88 |
| Escherichia coli ECRC99 | KEDOAH_19630 | clpP | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | no data | 62 | 88 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_03236 | | ATP-dependent Clp protease proteolytic subunit | strong | 62 | 88 |
| Escherichia coli Nissle 1917 | ECOLIN_RS02625 | | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | strong | 62 | 88 |
| Escherichia coli BW25113 | b0437 | clpP | ATP-dependent Clp protease proteolytic subunit (NCBI) | strong | 62 | 88 |
o | Rhizobium sp. OAE497 | ABIE40_RS07090 | | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | sig. | 58 | 94 |
| Pectobacterium carotovorum WPP14 | HER17_RS15850 | | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | no data | 62 | 88 |
| Synechococcus elongatus PCC 7942 | Synpcc7942_2525 | clpPII | ATP-dependent Clp protease proteolytic subunit ClpP | strong | 65 | 86 |
| Sphingomonas koreensis DSMZ 15582 | Ga0059261_0094 | | Protease subunit of ATP-dependent Clp proteases | no data | 63 | 90 |
o | Bosea sp. OAE506 | ABIE41_RS18060 | | ATP-dependent Clp protease proteolytic subunit | no data | 64 | 90 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU1335 | clpP | ATP-dependent Clp protease, proteolytic subunit (TIGR) | strong | 65 | 87 |
| Sinorhizobium meliloti 1021 | SMc01903 | | ATP-dependent Clp protease proteolytic subunit | no data | 59 | 92 |
| Pseudomonas sp. S08-1 | OH686_03645 | | ATP-dependent Clp endopeptidase, proteolytic subunit ClpP | no data | 65 | 88 |
| Caulobacter crescentus NA1000 | CCNA_02041 | | ATP-dependent endopeptidase clp, proteolytic subunit ClpP | no data | 61 | 92 |
| Caulobacter crescentus NA1000 Δfur | CCNA_02041 | | ATP-dependent endopeptidase clp, proteolytic subunit ClpP | no data | 61 | 92 |
o | Dinoroseobacter shibae DFL-12 | Dshi_1388 | | Endopeptidase Clp (RefSeq) | no data | 59 | 93 |
| Rhodopseudomonas palustris CGA009 | TX73_015355 | | ATP-dependent Clp protease proteolytic subunit | no data | 60 | 90 |
o | Phaeobacter inhibens DSM 17395 | PGA1_c12520 | | ATP-dependent Clp protease proteolytic subunit | no data | 61 | 89 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_0110 | | ATP-dependent Clp protease, proteolytic subunit ClpP (RefSeq) | insig. | 64 | 87 |
| Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS06490 | | ATP-dependent Clp protease proteolytic subunit | no data | 57 | 94 |
| Fusobacterium nucleatum SB010 | HUW76_01055 | | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | no data | 58 | 85 |
| Agrobacterium fabrum C58 | Atu1627 | | ATP-dependent Clp protease, proteolytic subunit | insig. | 57 | 88 |
| Sinorhizobium meliloti 1021 | SMc03841 | | ATP-dependent Clp protease proteolytic subunit | insig. | 56 | 89 |
| Rhizobium sp. OAE497 | ABIE40_RS04460 | | ATP-dependent Clp protease proteolytic subunit | insig. | 57 | 89 |
| Serratia liquefaciens MT49 | IAI46_10225 | | ATP-dependent Clp protease proteolytic subunit | insig. | 58 | 87 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS04270 | | ATP-dependent Clp protease proteolytic subunit | no data | 52 | 88 |