Homologs of rpoZ from Shewanella amazonensis SB2B

rpoZ: DNA-directed RNA polymerase subunit omega (RefSeq)
SEED: DNA-directed RNA polymerase omega subunit (EC 2.7.7.6)
KEGG: DNA-directed RNA polymerase subunit omega

96 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella amazonensis SB2B Sama_0265 rpoZ DNA-directed RNA polymerase subunit omega (RefSeq) no data 100 100
o Shewanella sp. ANA-3 Shewana3_3811 rpoZ DNA-directed RNA polymerase subunit omega (RefSeq) strong 96 100
o Shewanella oneidensis MR-1 SO0360 rpoZ DNA-directed RNA polymerase, omega subunit (NCBI ptt file) strong 95 100
  Shewanella loihica PV-4 Shew_3498 rpoZ DNA-directed RNA polymerase subunit omega (RefSeq) strong 92 78
o Erwinia amylovora T8 OLJFJH_05565 DNA-directed RNA polymerase subunit omega insig. 69 98
o Alteromonas macleodii MIT1002 MIT1002_00107 DNA-directed RNA polymerase subunit omega sig. 71 93
o Pantoea sp. MT58 IAI47_00515 DNA-directed RNA polymerase subunit omega strong 70 98
o Pectobacterium carotovorum WPP14 HER17_RS21380 DNA-directed RNA polymerase subunit omega insig. 71 98
o Klebsiella michiganensis M5al BWI76_RS27425 DNA-directed RNA polymerase subunit omega strong 71 98
o Erwinia tracheiphila SCR3 LU632_RS22205 rpoZ DNA-directed RNA polymerase subunit omega no data 69 98
o Dickeya dadantii 3937 DDA3937_RS00185 DNA-directed RNA polymerase subunit omega strong 72 98
o Escherichia coli BL21 ECD_03506 RNA polymerase, omega subunit strong 71 98
o Escherichia fergusonii Becca EFB2_00139 DNA-directed RNA polymerase subunit omega sig. 71 98
o Escherichia coli ECOR27 NOLOHH_07440 rpoZ DNA-directed RNA polymerase subunit omega strong 71 98
o Escherichia coli ECOR38 HEPCGN_14380 rpoZ DNA-directed RNA polymerase subunit omega cofit 71 98
o Escherichia coli ECRC100 OKFHMN_15560 rpoZ DNA-directed RNA polymerase subunit omega no data 71 98
o Escherichia coli ECRC101 MCAODC_06070 rpoZ DNA-directed RNA polymerase subunit omega cofit 71 98
o Escherichia coli ECRC102 NIAGMN_13320 rpoZ DNA-directed RNA polymerase subunit omega sig. 71 98
o Escherichia coli ECRC62 BNILDI_04075 rpoZ DNA-directed RNA polymerase subunit omega cofit 71 98
o Escherichia coli ECRC98 JDDGAC_19185 rpoZ DNA-directed RNA polymerase subunit omega cofit 71 98
o Escherichia coli ECRC99 KEDOAH_12585 rpoZ DNA-directed RNA polymerase subunit omega no data 71 98
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00052 DNA-directed RNA polymerase subunit omega cofit 71 98
o Escherichia coli Nissle 1917 ECOLIN_RS20785 DNA-directed RNA polymerase subunit omega no data 71 98
o Enterobacter asburiae PDN3 EX28DRAFT_3898 DNA-directed RNA polymerase subunit omega (EC 2.7.7.6) cofit 71 98
o Enterobacter sp. TBS_079 MPMX20_00087 DNA-directed RNA polymerase subunit omega sig. 71 98
o Escherichia coli BW25113 b3649 rpoZ DNA-directed RNA polymerase subunit omega (NCBI) strong 71 98
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF358 DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) no data 71 98
o Dickeya dianthicola 67-19 HGI48_RS21175 DNA-directed RNA polymerase subunit omega no data 71 98
o Dickeya dianthicola ME23 DZA65_RS22145 DNA-directed RNA polymerase subunit omega insig. 71 98
o Rahnella sp. WP5 EX31_RS15805 DNA-directed RNA polymerase subunit omega cofit 69 98
o Serratia liquefaciens MT49 IAI46_24890 DNA-directed RNA polymerase subunit omega no data 69 98
o Kangiella aquimarina DSM 16071 B158DRAFT_0575 DNA-directed RNA polymerase subunit omega (EC 2.7.7.6) no data 64 83
  Vibrio cholerae E7946 ATCC 55056 CSW01_13670 DNA-directed RNA polymerase subunit omega insig. 71 71
  Pseudomonas fluorescens SBW25 PFLU_RS29505 DNA-directed RNA polymerase subunit omega strong 55 65
  Pseudomonas fluorescens SBW25-INTG PFLU_RS29505 DNA-directed RNA polymerase subunit omega strong 55 65
  Pseudomonas simiae WCS417 PS417_27825 DNA-directed RNA polymerase subunit omega no data 55 65
  Pseudomonas sp. RS175 PFR28_04423 DNA-directed RNA polymerase subunit omega strong 55 65
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2114 DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) strong 55 65
  Pseudomonas fluorescens FW300-N2E3 AO353_09275 DNA-directed RNA polymerase subunit omega strong 55 65
  Pseudomonas fluorescens FW300-N2C3 AO356_12485 DNA-directed RNA polymerase subunit omega strong 55 65
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4362 DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) strong 55 65
  Pseudomonas sp. DMC3 GFF418 DNA-directed RNA polymerase subunit omega insig. 55 65
  Acinetobacter radioresistens SK82 MPMX26_02795 DNA-directed RNA polymerase subunit omega strong 59 70
  Pseudomonas sp. SVBP6 COO64_RS01550 rpoZ DNA-directed RNA polymerase subunit omega no data 51 74
  Pseudomonas stutzeri RCH2 Psest_3816 DNA-directed RNA polymerase, omega subunit insig. 53 74
  Marinobacter adhaerens HP15 HP15_304 DNA-directed RNA polymerase subunit omega no data 56 70
  Pseudomonas sp. S08-1 OH686_13555 DNA-directed RNA polymerase, omega subunit cofit 57 66
  Pseudomonas fluorescens GW456-L13 PfGW456L13_781 DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) no data 52 70
  Pseudomonas aeruginosa PA14 IKLFDK_26770 DNA-directed RNA polymerase subunit omega no data 58 65
  Pseudomonas sp. BP01 JOY50_RS08990 rpoZ DNA-directed RNA polymerase subunit omega no data 51 74
  Pseudomonas putida KT2440 PP_5301 DNA-directed RNA polymerase subunit omega no data 51 74
  Pseudomonas syringae pv. syringae B728a Psyr_0210 DNA-directed RNA polymerase subunit omega no data 48 70
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0210 DNA-directed RNA polymerase subunit omega no data 48 70
o Lysobacter sp. OAE881 ABIE51_RS17270 DNA-directed RNA polymerase subunit omega cofit 47 96
  Dechlorosoma suillum PS Dsui_0499 DNA-directed RNA polymerase, omega subunit strong 58 71
  Methylophilus sp. DMC18 GFF2127 DNA-directed RNA polymerase subunit omega no data 61 62
  Burkholderia phytofirmans PsJN BPHYT_RS15310 DNA-directed RNA polymerase subunit omega no data 58 70
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04005 DNA-directed RNA polymerase subunit omega no data 58 70
  Paraburkholderia graminis OAS925 ABIE53_003231 DNA-directed RNA polymerase subunit omega strong 58 70
  Paraburkholderia sabiae LMG 24235 QEN71_RS03660 DNA-directed RNA polymerase subunit omega no data 58 70
  Castellaniella sp019104865 MT123 ABCV34_RS03100 DNA-directed RNA polymerase subunit omega no data 55 70
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS11855 DNA-directed RNA polymerase subunit omega no data 49 71
  Cupriavidus basilensis FW507-4G11 RR42_RS04915 DNA-directed RNA polymerase subunit omega no data 61 62
  Ralstonia sp. UNC404CL21Col ABZR87_RS15230 DNA-directed RNA polymerase subunit omega no data 61 64
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS03320 DNA-directed RNA polymerase subunit omega strong 60 65
  Ralstonia solanacearum GMI1000 RS_RS10805 DNA-directed RNA polymerase subunit omega no data 60 65
  Ralstonia solanacearum PSI07 RPSI07_RS13865 DNA-directed RNA polymerase subunit omega no data 60 65
  Ralstonia solanacearum UW163 UW163_RS10400 DNA-directed RNA polymerase subunit omega no data 60 65
  Rhodanobacter sp. FW510-T8 OKGIIK_12105 rpoZ DNA-directed RNA polymerase subunit omega no data 49 71
  Rhodanobacter denitrificans MT42 LRK55_RS11515 DNA-directed RNA polymerase subunit omega no data 48 71
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS11790 DNA-directed RNA polymerase subunit omega no data 48 71
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS16750 DNA-directed RNA polymerase subunit omega no data 48 71
  Herbaspirillum seropedicae SmR1 HSERO_RS10640 DNA-directed RNA polymerase subunit omega no data 58 64
  Agrobacterium fabrum C58 Atu1029 DNA-directed RNA polymerase omega subunit no data 41 97
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1217.1 DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) no data 45 71
o Sphingomonas koreensis DSMZ 15582 Ga0059261_1925 DNA-directed RNA polymerase subunit omega (EC 2.7.7.6) no data 43 100
  Variovorax sp. SCN45 GFF2376 DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) no data 54 62
  Sinorhizobium meliloti 1021 SMc02408 DNA-directed RNA polymerase subunit omega no data 43 82
  Variovorax sp. OAS795 ABID97_RS23665 DNA-directed RNA polymerase subunit omega strong 54 62
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1035 DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) no data 54 64
  Xanthobacter sp. DMC5 GFF410 DNA-directed RNA polymerase subunit omega no data 42 95
  Rhodospirillum rubrum S1H Rru_A1857 RNA polymerase, omega subunit (NCBI) no data 52 70
  Acidovorax sp. GW101-3H11 Ac3H11_3665 DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) no data 53 64
  Rhodopseudomonas palustris CGA009 TX73_013950 DNA-directed RNA polymerase subunit omega no data 52 59
  Phaeobacter inhibens DSM 17395 PGA1_c01000 DNA-directed RNA polymerase subunit omega insig. 47 82
  Rhizobium sp. OAE497 ABIE40_RS06045 DNA-directed RNA polymerase subunit omega no data 41 82
  Caulobacter crescentus NA1000 CCNA_01621 DNA-directed RNA polymerase omega chain no data 48 70
  Caulobacter crescentus NA1000 Δfur CCNA_01621 DNA-directed RNA polymerase omega chain no data 48 70
  Dinoroseobacter shibae DFL-12 Dshi_0193 DNA-directed RNA polymerase, omega subunit (RefSeq) no data 50 59
  Magnetospirillum magneticum AMB-1 AMB_RS11395 DNA-directed RNA polymerase subunit omega no data 56 59
  Azospirillum sp. SherDot2 MPMX19_00837 DNA-directed RNA polymerase subunit omega no data 52 59
  Bosea sp. OAE506 ABIE41_RS19895 DNA-directed RNA polymerase subunit omega no data 52 59
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS05500 DNA-directed RNA polymerase subunit omega no data 52 59
  Desulfovibrio vulgaris Hildenborough JW710 DVU3242 rpoZ DNA-directed RNA polymerase, omega subunit (TIGR) no data 47 64
  Desulfovibrio vulgaris Miyazaki F DvMF_2294 DNA-directed RNA polymerase, omega subunit (RefSeq) no data 42 64
  Bifidobacterium breve UCC2003 BBR_RS17640 DNA-directed RNA polymerase subunit omega strong 33 64