Homologs of ybjR from Escherichia coli BW25113

ybjR: predicted amidase and lipoprotein (NCBI)
SEED: N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)
KEGG: N-acetylmuramoyl-L-alanine amidase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Escherichia coli BW25113 b0867 ybjR predicted amidase and lipoprotein (NCBI) sig. 100 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02801 N-acetylmuramoyl-L-alanine amidase AmiD insig. 100 100
o Escherichia coli ECOR27 NOLOHH_22260 amiD N-acetylmuramoyl-L-alanine amidase AmiD cofit 99 100
o Escherichia coli ECRC62 BNILDI_20515 amiD N-acetylmuramoyl-L-alanine amidase AmiD insig. 99 100
o Escherichia coli ECRC101 OKFHMN_05865 amiD N-acetylmuramoyl-L-alanine amidase AmiD insig. 99 100
o Escherichia coli ECRC101 MCAODC_25080 amiD N-acetylmuramoyl-L-alanine amidase AmiD insig. 99 100
o Escherichia coli ECRC102 NIAGMN_03905 amiD N-acetylmuramoyl-L-alanine amidase AmiD insig. 99 100
o Escherichia coli ECRC98 JDDGAC_09500 amiD N-acetylmuramoyl-L-alanine amidase AmiD no data 99 100
o Escherichia coli ECRC99 KEDOAH_22045 amiD N-acetylmuramoyl-L-alanine amidase AmiD no data 99 100
o Escherichia coli ECOR38 HEPCGN_02150 amiD N-acetylmuramoyl-L-alanine amidase AmiD cofit 99 100
o Escherichia fergusonii Becca EFB2_03194 N-acetylmuramoyl-L-alanine amidase AmiD insig. 99 100
o Escherichia coli Nissle 1917 ECOLIN_RS04615 N-acetylmuramoyl-L-alanine amidase AmiD cofit 99 100
o Escherichia coli BL21 ECD_00872 1,6-anhydro-N-acetylmuramyl-L-alanine amidase, Zn-dependent; OM lipoprotein insig. 99 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4915 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) insig. 83 95
o Klebsiella michiganensis M5al BWI76_RS09535 N-acetylmuramoyl-L-alanine amidase amid sig. 77 100
o Enterobacter sp. TBS_079 MPMX20_01510 N-acetylmuramoyl-L-alanine amidase AmiD insig. 77 100
o Enterobacter asburiae PDN3 EX28DRAFT_2084 Negative regulator of beta-lactamase expression insig. 74 100
o Rahnella sp. WP5 EX31_RS18620 N-acetylmuramoyl-L-alanine amidase insig. 61 97
o Pectobacterium carotovorum WPP14 HER17_RS12440 N-acetylmuramoyl-L-alanine amidase insig. 60 97
o Dickeya dianthicola 67-19 HGI48_RS09540 N-acetylmuramoyl-L-alanine amidase insig. 60 96
o Dickeya dianthicola ME23 DZA65_RS09850 N-acetylmuramoyl-L-alanine amidase insig. 59 97
o Serratia liquefaciens MT49 IAI46_08440 N-acetylmuramoyl-L-alanine amidase insig. 58 97
o Pantoea sp. MT58 IAI47_12980 N-acetylmuramoyl-L-alanine amidase insig. 62 94
o Dickeya dadantii 3937 DDA3937_RS09525 N-acetylmuramoyl-L-alanine amidase insig. 57 99
o Paraburkholderia sabiae LMG 24235 QEN71_RS22910 N-acetylmuramoyl-L-alanine amidase insig. 54 90
o Erwinia tracheiphila SCR3 LU632_RS00215 N-acetylmuramoyl-L-alanine amidase insig. 50 92
o Pseudomonas simiae WCS417 PS417_10290 N-acetylmuramoyl-L-alanine amidase insig. 46 99
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS17240 N-acetylmuramoyl-L-alanine amidase insig. 44 97
o Ralstonia solanacearum UW163 UW163_RS21905 N-acetylmuramoyl-L-alanine amidase insig. 44 97
o Pseudomonas fluorescens SBW25 PFLU_RS00430 N-acetylmuramoyl-L-alanine amidase cofit 43 97
o Pseudomonas fluorescens SBW25-INTG PFLU_RS00430 N-acetylmuramoyl-L-alanine amidase strong 43 97
o Ralstonia solanacearum GMI1000 RS_RS09065 N-acetylmuramoyl-L-alanine amidase insig. 45 94
o Ralstonia solanacearum PSI07 RPSI07_RS04695 N-acetylmuramoyl-L-alanine amidase insig. 44 99
  Pseudomonas simiae WCS417 PS417_00440 N-acetylmuramoyl-L-alanine amidase strong 43 93
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4155 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) strong 43 97
  Serratia liquefaciens MT49 IAI46_17125 N-acetylmuramoyl-L-alanine amidase insig. 48 84
o Pseudomonas sp. RS175 PFR28_00216 N-acetylmuramoyl-L-alanine amidase AmiD insig. 46 84
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1882 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) strong 41 95
o Pseudomonas sp. S08-1 OH686_12170 N-acetylmuramoyl-L-alanine amidase or 1,6-anhydro-N-acetylmuramyl-L-alanine amidase strong 42 93
  Erwinia tracheiphila SCR3 LU632_RS11910 N-acetylmuramoyl-L-alanine amidase insig. 44 88
o Pseudomonas stutzeri RCH2 Psest_0189 Negative regulator of beta-lactamase expression strong 43 93
o Pseudomonas putida KT2440 PP_0130 1,6-anhydro-N-acetylmuramyl-L-alanine amidase sig. 41 93
o Pseudomonas fluorescens FW300-N2C3 AO356_11430 N-acetylmuramoyl-L-alanine amidase strong 40 97
o Pseudomonas syringae pv. syringae B728a Psyr_0265 N-acetylmuramoyl-L-alanine amidase, family 2 insig. 41 93
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0265 N-acetylmuramoyl-L-alanine amidase, family 2 strong 41 93
  Erwinia tracheiphila SCR3 LU632_RS15790 N-acetylmuramoyl-L-alanine amidase insig. 43 88
  Pseudomonas sp. RS175 PFR28_04631 N-acetylmuramoyl-L-alanine amidase AmiD sig. 41 97
o Pseudomonas fluorescens FW300-N2E3 AO353_10965 N-acetylmuramoyl-L-alanine amidase sig. 42 92
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4968 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) insig. 42 87
  Pseudomonas fluorescens GW456-L13 PfGW456L13_587 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) strong 40 95
  Pseudomonas simiae WCS417 PS417_19510 N-acetylmuramoyl-L-alanine amidase insig. 42 83
  Pseudomonas fluorescens SBW25 PFLU_RS21475 N-acetylmuramoyl-L-alanine amidase insig. 43 83
  Pseudomonas fluorescens SBW25-INTG PFLU_RS21475 N-acetylmuramoyl-L-alanine amidase insig. 43 83
o Fusobacterium nucleatum SB010 HUW76_02295 N-acetylmuramoyl-L-alanine amidase cofit 38 89
o Azospirillum brasilense Sp245 AZOBR_RS12270 N-acetylmuramoyl-L-alanine amidase strong 39 79
o Azospirillum sp. SherDot2 MPMX19_01668 N-acetylmuramoyl-L-alanine amidase AmiD no data 39 80
o Magnetospirillum magneticum AMB-1 AMB_RS04375 N-acetylmuramoyl-L-alanine amidase no data 40 82
  Rhodopseudomonas palustris CGA009 TX73_018340 N-acetylmuramoyl-L-alanine amidase strong 39 83
o Rhodospirillum rubrum S1H Rru_A0960 AmpD (negative regulator of AmpC) (NCBI) sig. 39 82
o Sinorhizobium meliloti 1021 SMc01854 amidase (AMPD protein) no data 38 84
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS01470 N-acetylmuramoyl-L-alanine amidase no data 39 82
o Bosea sp. OAE506 ABIE41_RS12525 N-acetylmuramoyl-L-alanine amidase no data 40 82
  Agrobacterium fabrum C58 Atu2113 N-acetylmuramoyl-L-alanine amidase strong 39 79
o Sphingomonas koreensis DSMZ 15582 Ga0059261_0650 Negative regulator of beta-lactamase expression sig. 39 82
o Caulobacter crescentus NA1000 CCNA_02650 N-acetyl-anhydromuramyl-L-alanine amidase strong 35 82
o Caulobacter crescentus NA1000 Δfur CCNA_02650 N-acetyl-anhydromuramyl-L-alanine amidase cofit 35 82
o Rhizobium sp. OAE497 ABIE40_RS11900 N-acetylmuramoyl-L-alanine amidase strong 37 82
  Rhodanobacter sp. FW510-T8 OKGIIK_12400 N-acetylmuramoyl-L-alanine amidase insig. 44 55
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_08665 N-acetylmuramoyl-L-alanine amidase insig. 32 84
  Rhodanobacter denitrificans MT42 LRK55_RS11190 N-acetylmuramoyl-L-alanine amidase cofit 42 55
  Lysobacter sp. OAE881 ABIE51_RS03785 N-acetylmuramoyl-L-alanine amidase insig. 37 74
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS11460 N-acetylmuramoyl-L-alanine amidase insig. 42 55
  Phaeobacter inhibens DSM 17395 PGA1_c21950 putative N-acetylmuramoyl-L-alanine amidase AmiD strong 42 55
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4814.1 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) insig. 40 55
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS19580 N-acetylmuramoyl-L-alanine amidase insig. 40 58
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS21230 N-acetylmuramoyl-L-alanine amidase insig. 33 75
o Dinoroseobacter shibae DFL-12 Dshi_2783 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD (RefSeq) strong 34 84
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS20020 N-acetylmuramoyl-L-alanine amidase sig. 36 74
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2028 Negative regulator of beta-lactamase expression insig. 33 74
  Dechlorosoma suillum PS Dsui_0134 negative regulator of beta-lactamase expression cofit 38 60
  Herbaspirillum seropedicae SmR1 HSERO_RS01880 N-acetyl-anhydromuranmyl-L-alanine amidase sig. 40 49
  Rahnella sp. WP5 EX31_RS03510 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD insig. 40 46
  Pseudomonas stutzeri RCH2 Psest_0725 Negative regulator of beta-lactamase expression strong 43 43
  Shewanella sp. ANA-3 Shewana3_0423 N-acetyl-anhydromuranmyl-L-alanine amidase (RefSeq) strong 39 47
  Shewanella oneidensis MR-1 SO0421 ampD AmpD protein (NCBI ptt file) strong 38 47
  Ralstonia solanacearum PSI07 RPSI07_RS11160 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD no data 37 59
  Variovorax sp. OAS795 ABID97_RS06410 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD no data 41 46
  Ralstonia solanacearum GMI1000 RS_RS14030 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD no data 38 50
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS06080 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD no data 41 45
  Ralstonia solanacearum UW163 UW163_RS07545 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD no data 41 45
  Pseudomonas syringae pv. syringae B728a Psyr_0817 N-acetylmuramoyl-L-alanine amidase, family 2 sig. 38 45
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0817 N-acetylmuramoyl-L-alanine amidase, family 2 sig. 38 45
  Enterobacter asburiae PDN3 EX28DRAFT_3703 N-acetylmuramoyl-L-alanine amidase no data 35 53
  Escherichia fergusonii Becca EFB2_03939 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD insig. 40 46
  Escherichia coli ECOR38 HEPCGN_08505 ampD 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD cofit 40 46
  Escherichia coli Nissle 1917 ECOLIN_RS00590 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD cofit 40 46
  Shewanella amazonensis SB2B Sama_0372 N-acetyl-anhydromuranmyl-L-alanine amidase (RefSeq) sig. 36 53
  Alteromonas macleodii MIT1002 MIT1002_03138 N-acetylmuramoyl-L-alanine amidase AmiD precursor insig. 33 56
  Variovorax sp. SCN45 GFF4433 1,6-anhydro-N-acetylmuramyl-L-alanine amidase insig. 41 45
  Pectobacterium carotovorum WPP14 HER17_RS03260 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD insig. 37 45