Conservation of cofitness between TX73_013920 and TX73_015770 in Rhodopseudomonas palustris CGA009

95 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodopseudomonas palustris CGA009 1.0 TX73_013920 4-hydroxy-tetrahydrodipicolinate synthase 1.0 TX73_015770 RNA degradosome polyphosphate kinase 0.60 6
Bosea sp. OAE506 0.76 ABIE41_RS19960 4-hydroxy-tetrahydrodipicolinate synthase 0.67 ABIE41_RS16125 RNA degradosome polyphosphate kinase — —
Dinoroseobacter shibae DFL-12 0.60 Dshi_0149 dihydrodipicolinate synthase (RefSeq) 0.54 Dshi_0740 Polyphosphate kinase (RefSeq) — —
Rhizobium sp. OAE497 0.60 ABIE40_RS06030 4-hydroxy-tetrahydrodipicolinate synthase 0.65 ABIE40_RS06575 RNA degradosome polyphosphate kinase — —
Sinorhizobium meliloti 1021 0.60 SMc02404 dihydrodipicolinate synthase 0.65 SMc00618 polyphosphate kinase — —
Agrobacterium fabrum C58 0.60 Atu1024 dihydrodipicolinate synthase 0.63 Atu1144 polyphosphate kinase — —
Azospirillum sp. SherDot2 0.60 MPMX19_01219 4-hydroxy-tetrahydrodipicolinate synthase 0.60 MPMX19_01149 Polyphosphate kinase — —
Rhodospirillum rubrum S1H 0.58 Rru_A1865 Dihydrodipicolinate synthase subfamily (NCBI) 0.57 Rru_A2161 Polyphosphate kinase (NCBI) low > 58
Azospirillum brasilense Sp245 0.58 AZOBR_RS08420 dihydrodipicolinate synthase 0.61 AZOBR_RS16235 polyphosphate kinase — —
Magnetospirillum magneticum AMB-1 0.57 AMB_RS12805 4-hydroxy-tetrahydrodipicolinate synthase 0.60 AMB_RS14295 RNA degradosome polyphosphate kinase — —
Caulobacter crescentus NA1000 0.56 CCNA_01253 dihydrodipicolinate synthase 0.59 CCNA_01782 polyphosphate kinase 1 — —
Caulobacter crescentus NA1000 Δfur 0.56 CCNA_01253 dihydrodipicolinate synthase 0.59 CCNA_01782 polyphosphate kinase 1 — —
Pseudomonas sp. RS175 0.43 PFR28_00699 4-hydroxy-tetrahydrodipicolinate synthase 0.33 PFR28_04345 Polyphosphate kinase — —
Pseudomonas fluorescens SBW25-INTG 0.43 PFLU_RS07275 4-hydroxy-tetrahydrodipicolinate synthase 0.33 PFLU_RS29095 polyphosphate kinase 1 low > 109
Pseudomonas fluorescens SBW25 0.43 PFLU_RS07275 4-hydroxy-tetrahydrodipicolinate synthase 0.33 PFLU_RS29095 polyphosphate kinase 1 0.53 14
Pseudomonas fluorescens FW300-N2E2 0.43 Pf6N2E2_2747 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) 0.33 Pf6N2E2_4453 Polyphosphate kinase (EC 2.7.4.1) — —
Variovorax sp. OAS795 0.43 ABID97_RS20125 4-hydroxy-tetrahydrodipicolinate synthase 0.30 ABID97_RS14575 polyphosphate kinase 1 low > 91
Pseudomonas fluorescens FW300-N2C3 0.43 AO356_04530 4-hydroxy-tetrahydrodipicolinate synthase 0.33 AO356_12895 polyphosphate kinase — —
Ralstonia solanacearum IBSBF1503 0.43 RALBFv3_RS14890 4-hydroxy-tetrahydrodipicolinate synthase 0.33 RALBFv3_RS02115 polyphosphate kinase 1 — —
Pseudomonas fluorescens GW456-L13 0.43 PfGW456L13_4507 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) 0.33 PfGW456L13_874 Polyphosphate kinase (EC 2.7.4.1) low > 87
Ralstonia solanacearum GMI1000 0.43 RS_RS05700 4-hydroxy-tetrahydrodipicolinate synthase 0.33 RS_RS07705 polyphosphate kinase 1 low > 80
Ralstonia solanacearum UW163 0.43 UW163_RS12360 4-hydroxy-tetrahydrodipicolinate synthase 0.33 UW163_RS15425 polyphosphate kinase 1 — —
Dechlorosoma suillum PS 0.43 Dsui_1977 dihydrodipicolinate synthase 0.35 Dsui_2814 polyphosphate kinase 1 — —
Pseudomonas syringae pv. syringae B728a 0.43 Psyr_1548 dihydrodipicolinate synthase 0.33 Psyr_0293 Polyphosphate kinase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.43 Psyr_1548 dihydrodipicolinate synthase 0.33 Psyr_0293 Polyphosphate kinase — —
Pseudomonas simiae WCS417 0.43 PS417_07165 dihydrodipicolinate synthase 0.33 PS417_27435 polyphosphate kinase 0.40 4
Brevundimonas sp. GW460-12-10-14-LB2 0.43 A4249_RS05475 4-hydroxy-tetrahydrodipicolinate synthase 0.58 A4249_RS08195 RNA degradosome polyphosphate kinase — —
Ralstonia solanacearum PSI07 0.43 RPSI07_RS18470 4-hydroxy-tetrahydrodipicolinate synthase 0.33 RPSI07_RS15330 polyphosphate kinase 1 low > 81
Variovorax sp. SCN45 0.43 GFF2740 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) 0.30 GFF1089 Polyphosphate kinase (EC 2.7.4.1) low > 127
Pseudomonas fluorescens FW300-N1B4 0.43 Pf1N1B4_3332 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) 0.33 Pf1N1B4_2208 Polyphosphate kinase (EC 2.7.4.1) — —
Ralstonia sp. UNC404CL21Col 0.42 ABZR87_RS10545 4-hydroxy-tetrahydrodipicolinate synthase 0.33 ABZR87_RS14065 polyphosphate kinase 1 — —
Klebsiella michiganensis M5al 0.42 BWI76_RS20905 4-hydroxy-tetrahydrodipicolinate synthase 0.26 BWI76_RS20995 RNA degradosome polyphosphate kinase — —
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS05940 4-hydroxy-tetrahydrodipicolinate synthase 0.34 QEN71_RS04860 polyphosphate kinase 1 — —
Pseudomonas fluorescens FW300-N2E3 0.42 AO353_17670 4-hydroxy-tetrahydrodipicolinate synthase 0.33 AO353_08885 polyphosphate kinase — —
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS06250 dihydrodipicolinate synthase 0.34 RR42_RS13435 polyphosphate kinase low > 128
Herbaspirillum seropedicae SmR1 0.42 HSERO_RS16395 dihydrodipicolinate synthase 0.33 HSERO_RS06305 polyphosphate kinase — —
Enterobacter asburiae PDN3 0.41 EX28DRAFT_0182 4-hydroxy-tetrahydrodipicolinate synthase 0.26 EX28DRAFT_0166 polyphosphate kinase 1 — —
Acinetobacter radioresistens SK82 0.41 MPMX26_02982 4-hydroxy-tetrahydrodipicolinate synthase 0.36 MPMX26_02335 Polyphosphate kinase — —
Burkholderia phytofirmans PsJN 0.41 BPHYT_RS12615 dihydrodipicolinate synthase 0.33 BPHYT_RS14110 polyphosphate kinase low > 109
Kangiella aquimarina DSM 16071 0.41 B158DRAFT_2444 dihydrodipicolinate synthase 0.33 B158DRAFT_2312 polyphosphate kinase 1 — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.41 GFF2180 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) 0.25 GFF2167 Polyphosphate kinase (EC 2.7.4.1) — —
Enterobacter sp. TBS_079 0.41 MPMX20_03340 4-hydroxy-tetrahydrodipicolinate synthase 0.26 MPMX20_03356 Polyphosphate kinase — —
Pseudomonas stutzeri RCH2 0.41 Psest_1515 dihydrodipicolinate synthase 0.34 Psest_3732 polyphosphate kinase 1 — —
Sphingomonas koreensis DSMZ 15582 0.41 Ga0059261_0213 4-hydroxy-tetrahydrodipicolinate synthase 0.55 Ga0059261_0225 polyphosphate kinase 1 — —
Pseudomonas sp. S08-1 0.41 OH686_19215 4-hydroxy-tetrahydrodipicolinate synthase 0.35 OH686_13995 polyphosphate kinase 1 — —
Paraburkholderia bryophila 376MFSha3.1 0.41 H281DRAFT_00509 dihydrodipicolinate synthase 0.34 H281DRAFT_04418 polyphosphate kinase — —
Paraburkholderia graminis OAS925 0.40 ABIE53_002749 4-hydroxy-tetrahydrodipicolinate synthase 0.33 ABIE53_002988 polyphosphate kinase — —
Erwinia tracheiphila SCR3 0.40 LU632_RS08325 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.26 LU632_RS08260 ppk1 polyphosphate kinase 1 — —
Escherichia coli ECOR38 0.40 HEPCGN_21085 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.26 HEPCGN_20965 ppk1 polyphosphate kinase 1 — —
Escherichia coli Nissle 1917 0.40 ECOLIN_RS14145 4-hydroxy-tetrahydrodipicolinate synthase 0.26 ECOLIN_RS14200 polyphosphate kinase 1 — —
Escherichia coli BW25113 0.40 b2478 dapA dihydrodipicolinate synthase (NCBI) 0.26 b2501 ppk polyphosphate kinase (NCBI) — —
Pantoea sp. MT58 0.40 IAI47_05265 4-hydroxy-tetrahydrodipicolinate synthase 0.25 IAI47_05155 polyphosphate kinase 1 — —
Escherichia coli ECRC101 0.40 MCAODC_12445 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.26 MCAODC_12330 ppk1 polyphosphate kinase 1 — —
Escherichia coli ECRC99 0.40 KEDOAH_06305 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.26 KEDOAH_06420 ppk1 polyphosphate kinase 1 — —
Escherichia coli ECRC102 0.40 NIAGMN_19685 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.26 NIAGMN_19570 ppk1 polyphosphate kinase 1 — —
Escherichia coli BL21 0.40 ECD_02370 dihydrodipicolinate synthase 0.26 ECD_02393 polyphosphate kinase, component of RNA degradosome — —
Escherichia coli ECOR27 0.40 NOLOHH_13575 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.26 NOLOHH_13450 ppk1 polyphosphate kinase 1 — —
Escherichia fergusonii Becca 0.40 EFB2_01408 4-hydroxy-tetrahydrodipicolinate synthase 0.26 EFB2_01397 Polyphosphate kinase — —
Escherichia coli ECRC100 0.40 OKFHMN_21915 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.26 OKFHMN_21800 ppk1 polyphosphate kinase 1 — —
Escherichia coli ECRC98 0.40 JDDGAC_25860 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.26 JDDGAC_25745 ppk1 polyphosphate kinase 1 — —
Escherichia coli ECRC62 0.40 BNILDI_12385 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.26 BNILDI_12260 ppk1 polyphosphate kinase 1 — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.40 OHPLBJKB_01251 4-hydroxy-tetrahydrodipicolinate synthase 0.26 OHPLBJKB_01225 Polyphosphate kinase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.40 GFF5565 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) 0.29 GFF4226 Polyphosphate kinase (EC 2.7.4.1) — —
Dickeya dadantii 3937 0.40 DDA3937_RS06065 4-hydroxy-tetrahydrodipicolinate synthase 0.24 DDA3937_RS15150 polyphosphate kinase 1 — —
Pectobacterium carotovorum WPP14 0.40 HER17_RS15415 4-hydroxy-tetrahydrodipicolinate synthase 0.25 HER17_RS06425 polyphosphate kinase 1 — —
Dickeya dianthicola 67-19 0.40 HGI48_RS06110 4-hydroxy-tetrahydrodipicolinate synthase 0.24 HGI48_RS15225 polyphosphate kinase 1 — —
Pseudomonas putida KT2440 0.40 PP_1237 4-hydroxy-tetrahydrodipicolinate synthase 0.33 PP_5217 Polyphosphate kinase low > 96
Rahnella sp. WP5 0.40 EX31_RS22740 4-hydroxy-tetrahydrodipicolinate synthase 0.25 EX31_RS22680 polyphosphate kinase 1 low > 89
Castellaniella sp019104865 MT123 0.39 ABCV34_RS15825 4-hydroxy-tetrahydrodipicolinate synthase 0.34 ABCV34_RS15580 polyphosphate kinase 1 — —
Acidovorax sp. GW101-3H11 0.39 Ac3H11_277 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) 0.29 Ac3H11_452 Polyphosphate kinase (EC 2.7.4.1) low > 79
Serratia liquefaciens MT49 0.39 IAI46_18780 4-hydroxy-tetrahydrodipicolinate synthase 0.26 IAI46_18915 polyphosphate kinase 1 low > 86
Dickeya dianthicola ME23 0.39 DZA65_RS06460 4-hydroxy-tetrahydrodipicolinate synthase 0.24 DZA65_RS16045 polyphosphate kinase 1 — —
Marinobacter adhaerens HP15 0.39 HP15_2027 dihydrodipicolinate synthase 0.31 HP15_3334 polyphosphate kinase — —
Vibrio cholerae E7946 ATCC 55056 0.38 CSW01_10755 4-hydroxy-tetrahydrodipicolinate synthase 0.24 CSW01_03780 polyphosphate kinase 1 — —
Alteromonas macleodii MIT1002 0.38 MIT1002_02207 4-hydroxy-tetrahydrodipicolinate synthase 0.25 MIT1002_00872 Polyphosphate kinase — —
Shewanella loihica PV-4 0.36 Shew_1848 dihydrodipicolinate synthase (RefSeq) 0.23 Shew_3079 polyphosphate kinase (RefSeq) — —
Shewanella amazonensis SB2B 0.36 Sama_1908 dihydrodipicolinate synthase (RefSeq) 0.24 Sama_2011 polyphosphate kinase (RefSeq) — —
Shewanella sp. ANA-3 0.35 Shewana3_1656 dihydrodipicolinate synthase (RefSeq) 0.24 Shewana3_2417 polyphosphate kinase (RefSeq) — —
Phocaeicola dorei CL03T12C01 0.34 ABI39_RS17235 4-hydroxy-tetrahydrodipicolinate synthase 0.24 ABI39_RS01585 RNA degradosome polyphosphate kinase — —
Phocaeicola vulgatus CL09T03C04 0.34 HMPREF1058_RS03990 4-hydroxy-tetrahydrodipicolinate synthase 0.24 HMPREF1058_RS02340 RNA degradosome polyphosphate kinase — —
Parabacteroides merdae CL09T00C40 0.34 HMPREF1078_RS01735 4-hydroxy-tetrahydrodipicolinate synthase 0.23 HMPREF1078_RS16770 RNA degradosome polyphosphate kinase — —
Bacteroides thetaiotaomicron VPI-5482 0.33 BT0895 dihydrodipicolinate synthase (NCBI ptt file) 0.23 BT2019 polyphosphate kinase (NCBI ptt file) — —
Bacteroides ovatus ATCC 8483 0.33 BACOVA_02617 dihydrodipicolinate synthase 0.23 BACOVA_01446 polyphosphate kinase 1 — —
Dyella japonica UNC79MFTsu3.2 0.33 ABZR86_RS00785 4-hydroxy-tetrahydrodipicolinate synthase 0.33 ABZR86_RS00710 polyphosphate kinase 1 — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.32 ABZR88_RS15585 4-hydroxy-tetrahydrodipicolinate synthase 0.26 ABZR88_RS04845 polyphosphate kinase 1 — —
Bacteroides stercoris CC31F 0.32 HMPREF1181_RS14165 4-hydroxy-tetrahydrodipicolinate synthase 0.24 HMPREF1181_RS08035 RNA degradosome polyphosphate kinase — —
Pedobacter sp. GW460-11-11-14-LB5 0.31 CA265_RS02050 4-hydroxy-tetrahydrodipicolinate synthase 0.25 CA265_RS09830 polyphosphate kinase 1 — —
Rhodanobacter denitrificans FW104-10B01 0.31 LRK54_RS15085 4-hydroxy-tetrahydrodipicolinate synthase 0.33 LRK54_RS16000 polyphosphate kinase 1 — —
Rhodanobacter denitrificans MT42 0.31 LRK55_RS14800 4-hydroxy-tetrahydrodipicolinate synthase 0.33 LRK55_RS15755 polyphosphate kinase 1 — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.30 Echvi_3959 dihydrodipicolinate synthase 0.28 Echvi_2996 polyphosphate kinase 1 — —
Mycobacterium tuberculosis H37Rv 0.29 Rv2753c Probable dihydrodipicolinate synthase DapA (DHDPS) (dihydrodipicolinate synthetase) 0.38 Rv2984 Polyphosphate kinase PPK (polyphosphoric acid kinase) (ATP-polyphosphate phosphotransferase) — —
Synechococcus elongatus PCC 7942 0.28 Synpcc7942_1847 dapA dihydrodipicolinate synthase 0.40 Synpcc7942_1566 ppk polyphosphate kinase — —
Lysobacter sp. OAE881 0.28 ABIE51_RS07995 4-hydroxy-tetrahydrodipicolinate synthase 0.33 ABIE51_RS14230 polyphosphate kinase 1 — —
Rhodanobacter sp. FW510-T8 0.27 OKGIIK_03855 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.33 OKGIIK_08995 ppk1 RNA degradosome polyphosphate kinase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.26 CA264_04485 4-hydroxy-tetrahydrodipicolinate synthase 0.30 CA264_11200 RNA degradosome polyphosphate kinase — —
Xanthomonas campestris pv. campestris strain 8004 0.26 Xcc-8004.3085.1 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) 0.31 Xcc-8004.4064.1 Polyphosphate kinase (EC 2.7.4.1) — —

Not shown: 6 genomes with orthologs for TX73_013920 only; 1 genomes with orthologs for TX73_015770 only