| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Rhodopseudomonas palustris CGA009 | 1.0 | TX73_013920 | | 4-hydroxy-tetrahydrodipicolinate synthase | 1.0 | TX73_006010 | | excinuclease ABC subunit UvrC | 0.55 | 15 |
| Dinoroseobacter shibae DFL-12 | 0.60 | Dshi_0149 | | dihydrodipicolinate synthase (RefSeq) | 0.51 | Dshi_0644 | | excinuclease ABC, C subunit (RefSeq) | — | — |
| Sinorhizobium meliloti 1021 | 0.60 | SMc02404 | | dihydrodipicolinate synthase | 0.57 | SMc00602 | | excinuclease ABC subunit C | — | — |
| Agrobacterium fabrum C58 | 0.60 | Atu1024 | | dihydrodipicolinate synthase | 0.57 | Atu1129 | | excinuclease ABC chain C | — | — |
| Rhizobium sp. OAE497 | 0.60 | ABIE40_RS06030 | | 4-hydroxy-tetrahydrodipicolinate synthase | 0.57 | ABIE40_RS06500 | | excinuclease ABC subunit UvrC | — | — |
| Azospirillum sp. SherDot2 | 0.60 | MPMX19_01219 | | 4-hydroxy-tetrahydrodipicolinate synthase | 0.50 | MPMX19_01070 | | UvrABC system protein C | — | — |
| Rhodospirillum rubrum S1H | 0.58 | Rru_A1865 | | Dihydrodipicolinate synthase subfamily (NCBI) | 0.49 | Rru_A2220 | | Excinuclease ABC, C subunit (NCBI) | low | > 58 |
| Azospirillum brasilense Sp245 | 0.58 | AZOBR_RS08420 | | dihydrodipicolinate synthase | 0.50 | AZOBR_RS08965 | | excinuclease ABC subunit C | — | — |
| Magnetospirillum magneticum AMB-1 | 0.57 | AMB_RS12805 | | 4-hydroxy-tetrahydrodipicolinate synthase | 0.50 | AMB_RS19240 | | UvrABC system protein C | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.56 | CCNA_01253 | | dihydrodipicolinate synthase | 0.48 | CCNA_02975 | | excinuclease ABC subunit C | — | — |
| Caulobacter crescentus NA1000 | 0.56 | CCNA_01253 | | dihydrodipicolinate synthase | 0.48 | CCNA_02975 | | excinuclease ABC subunit C | — | — |
| Phaeobacter inhibens DSM 17395 | 0.55 | PGA1_c28930 | | dihydrodipicolinate synthase DapA | 0.50 | PGA1_c02880 | | uvrABC system protein C | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.48 | DVU1868 | dapA | dihydrodipicolinate synthase (TIGR) | 0.19 | DVU0801 | uvrC | excinuclease ABC, C subunit (TIGR) | — | — |
| Pseudomonas fluorescens SBW25 | 0.43 | PFLU_RS07275 | | 4-hydroxy-tetrahydrodipicolinate synthase | 0.34 | PFLU_RS10770 | | excinuclease ABC subunit UvrC | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.43 | PFLU_RS07275 | | 4-hydroxy-tetrahydrodipicolinate synthase | 0.34 | PFLU_RS10770 | | excinuclease ABC subunit UvrC | low | > 109 |
| Pseudomonas sp. RS175 | 0.43 | PFR28_00699 | | 4-hydroxy-tetrahydrodipicolinate synthase | 0.33 | PFR28_01411 | | UvrABC system protein C | — | — |
| Variovorax sp. OAS795 | 0.43 | ABID97_RS20125 | | 4-hydroxy-tetrahydrodipicolinate synthase | 0.30 | ABID97_RS10635 | | excinuclease ABC subunit UvrC | low | > 91 |
| Pseudomonas fluorescens FW300-N2E2 | 0.43 | Pf6N2E2_2747 | | 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) | 0.33 | Pf6N2E2_2021 | | Excinuclease ABC subunit C | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.43 | AO356_04530 | | 4-hydroxy-tetrahydrodipicolinate synthase | 0.33 | AO356_00350 | | excinuclease ABC subunit C | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.43 | RALBFv3_RS14890 | | 4-hydroxy-tetrahydrodipicolinate synthase | 0.29 | RALBFv3_RS14525 | | excinuclease ABC subunit UvrC | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.43 | PfGW456L13_4507 | | 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) | 0.33 | PfGW456L13_2886 | | Excinuclease ABC subunit C | low | > 87 |
| Ralstonia solanacearum UW163 | 0.43 | UW163_RS12360 | | 4-hydroxy-tetrahydrodipicolinate synthase | 0.29 | UW163_RS11990 | | excinuclease ABC subunit UvrC | — | — |
| Ralstonia solanacearum GMI1000 | 0.43 | RS_RS05700 | | 4-hydroxy-tetrahydrodipicolinate synthase | 0.29 | RS_RS05305 | | excinuclease ABC subunit UvrC | low | > 80 |
| Dechlorosoma suillum PS | 0.43 | Dsui_1977 | | dihydrodipicolinate synthase | 0.32 | Dsui_2470 | | excinuclease ABC, C subunit | — | — |
| Pseudomonas simiae WCS417 | 0.43 | PS417_07165 | | dihydrodipicolinate synthase | 0.33 | PS417_10725 | | excinuclease ABC subunit C | low | > 88 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.43 | Psyr_1548 | | dihydrodipicolinate synthase | 0.33 | Psyr_2896 | | Excinuclease ABC subunit C | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.43 | Psyr_1548 | | dihydrodipicolinate synthase | 0.33 | Psyr_2896 | | Excinuclease ABC subunit C | — | — |
| Variovorax sp. SCN45 | 0.43 | GFF2740 | | 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) | 0.29 | GFF2859 | | Excinuclease ABC subunit C | low | > 127 |
| Pseudomonas fluorescens FW300-N1B4 | 0.43 | Pf1N1B4_3332 | | 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) | 0.33 | Pf1N1B4_5618 | | Excinuclease ABC subunit C | — | — |
| Ralstonia solanacearum PSI07 | 0.43 | RPSI07_RS18470 | | 4-hydroxy-tetrahydrodipicolinate synthase | 0.29 | RPSI07_RS18935 | | excinuclease ABC subunit UvrC | low | > 81 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.43 | A4249_RS05475 | | 4-hydroxy-tetrahydrodipicolinate synthase | 0.49 | A4249_RS01670 | | excinuclease ABC subunit UvrC | — | — |
| Ralstonia sp. UNC404CL21Col | 0.42 | ABZR87_RS10545 | | 4-hydroxy-tetrahydrodipicolinate synthase | 0.30 | ABZR87_RS10245 | | excinuclease ABC subunit UvrC | — | — |
| Klebsiella michiganensis M5al | 0.42 | BWI76_RS20905 | | 4-hydroxy-tetrahydrodipicolinate synthase | 0.31 | BWI76_RS18330 | | excinuclease ABC subunit C | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.42 | AO353_17670 | | 4-hydroxy-tetrahydrodipicolinate synthase | 0.33 | AO353_21835 | | excinuclease ABC subunit C | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.42 | RR42_RS06250 | | dihydrodipicolinate synthase | 0.30 | RR42_RS14000 | | excinuclease ABC subunit C | low | > 128 |
| Herbaspirillum seropedicae SmR1 | 0.42 | HSERO_RS16395 | | dihydrodipicolinate synthase | 0.31 | HSERO_RS09690 | | excinuclease ABC subunit C | — | — |
| Enterobacter asburiae PDN3 | 0.41 | EX28DRAFT_0182 | | 4-hydroxy-tetrahydrodipicolinate synthase | 0.30 | EX28DRAFT_0634 | | Excinuclease ABC subunit C | — | — |
| Acinetobacter radioresistens SK82 | 0.41 | MPMX26_02982 | | 4-hydroxy-tetrahydrodipicolinate synthase | 0.28 | MPMX26_00228 | | UvrABC system protein C | — | — |
| Kangiella aquimarina DSM 16071 | 0.41 | B158DRAFT_2444 | | dihydrodipicolinate synthase | 0.30 | B158DRAFT_1273 | | Excinuclease ABC subunit C | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.41 | GFF2180 | | 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) | 0.30 | GFF1700 | | Excinuclease ABC subunit C | — | — |
| Pseudomonas stutzeri RCH2 | 0.41 | Psest_1515 | | dihydrodipicolinate synthase | 0.34 | Psest_2259 | | excinuclease ABC, C subunit | — | — |
| Enterobacter sp. TBS_079 | 0.41 | MPMX20_03340 | | 4-hydroxy-tetrahydrodipicolinate synthase | 0.30 | MPMX20_02838 | | UvrABC system protein C | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.41 | Ga0059261_0213 | | 4-hydroxy-tetrahydrodipicolinate synthase | 0.45 | Ga0059261_3186 | | Excinuclease ABC subunit C | — | — |
| Pseudomonas sp. S08-1 | 0.41 | OH686_19215 | | 4-hydroxy-tetrahydrodipicolinate synthase | 0.33 | OH686_00340 | | excinuclease ABC subunit C | — | — |
| Erwinia tracheiphila SCR3 | 0.40 | LU632_RS08325 | dapA | 4-hydroxy-tetrahydrodipicolinate synthase | 0.30 | LU632_RS10195 | uvrC | excinuclease ABC subunit UvrC | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.40 | OHPLBJKB_01251 | | 4-hydroxy-tetrahydrodipicolinate synthase | 0.31 | OHPLBJKB_01816 | | UvrABC system protein C | — | — |
| Escherichia coli ECRC102 | 0.40 | NIAGMN_19685 | dapA | 4-hydroxy-tetrahydrodipicolinate synthase | 0.31 | NIAGMN_02225 | uvrC | excinuclease ABC subunit UvrC | — | — |
| Escherichia coli ECRC100 | 0.40 | OKFHMN_21915 | dapA | 4-hydroxy-tetrahydrodipicolinate synthase | 0.31 | OKFHMN_25825 | uvrC | excinuclease ABC subunit UvrC | — | — |
| Escherichia coli ECOR38 | 0.40 | HEPCGN_21085 | dapA | 4-hydroxy-tetrahydrodipicolinate synthase | 0.31 | HEPCGN_04180 | uvrC | excinuclease ABC subunit UvrC | — | — |
| Escherichia coli ECRC101 | 0.40 | MCAODC_12445 | dapA | 4-hydroxy-tetrahydrodipicolinate synthase | 0.31 | MCAODC_19565 | uvrC | excinuclease ABC subunit UvrC | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.40 | GFF5565 | | 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) | 0.29 | GFF3847 | | Excinuclease ABC subunit C | — | — |
| Escherichia coli BL21 | 0.40 | ECD_02370 | | dihydrodipicolinate synthase | 0.31 | ECD_01878 | | excinuclease UvrABC, endonuclease subunit | — | — |
| Escherichia coli BW25113 | 0.40 | b2478 | dapA | dihydrodipicolinate synthase (NCBI) | 0.31 | b1913 | uvrC | excinuclease ABC, subunit C; repair of UV damage to DNA (VIMSS) | — | — |
| Escherichia coli ECRC62 | 0.40 | BNILDI_12385 | dapA | 4-hydroxy-tetrahydrodipicolinate synthase | 0.31 | BNILDI_15235 | uvrC | excinuclease ABC subunit UvrC | — | — |
| Escherichia coli Nissle 1917 | 0.40 | ECOLIN_RS14145 | | 4-hydroxy-tetrahydrodipicolinate synthase | 0.31 | ECOLIN_RS10895 | | excinuclease ABC subunit UvrC | — | — |
| Pantoea sp. MT58 | 0.40 | IAI47_05265 | | 4-hydroxy-tetrahydrodipicolinate synthase | 0.29 | IAI47_12465 | | excinuclease ABC subunit UvrC | — | — |
| Escherichia coli ECOR27 | 0.40 | NOLOHH_13575 | dapA | 4-hydroxy-tetrahydrodipicolinate synthase | 0.31 | NOLOHH_16445 | uvrC | excinuclease ABC subunit UvrC | — | — |
| Escherichia fergusonii Becca | 0.40 | EFB2_01408 | | 4-hydroxy-tetrahydrodipicolinate synthase | 0.31 | EFB2_02033 | | UvrABC system protein C | — | — |
| Escherichia coli ECRC99 | 0.40 | KEDOAH_06305 | dapA | 4-hydroxy-tetrahydrodipicolinate synthase | 0.31 | KEDOAH_02265 | uvrC | excinuclease ABC subunit UvrC | — | — |
| Escherichia coli ECRC98 | 0.40 | JDDGAC_25860 | dapA | 4-hydroxy-tetrahydrodipicolinate synthase | 0.31 | JDDGAC_00415 | uvrC | excinuclease ABC subunit UvrC | — | — |
| Dickeya dianthicola 67-19 | 0.40 | HGI48_RS06110 | | 4-hydroxy-tetrahydrodipicolinate synthase | 0.31 | HGI48_RS13795 | | excinuclease ABC subunit UvrC | — | — |
| Pectobacterium carotovorum WPP14 | 0.40 | HER17_RS15415 | | 4-hydroxy-tetrahydrodipicolinate synthase | 0.30 | HER17_RS07715 | | excinuclease ABC subunit UvrC | — | — |
| Pseudomonas putida KT2440 | 0.40 | PP_1237 | | 4-hydroxy-tetrahydrodipicolinate synthase | 0.34 | PP_4098 | | UvrABC system protein C | low | > 96 |
| Rahnella sp. WP5 | 0.40 | EX31_RS22740 | | 4-hydroxy-tetrahydrodipicolinate synthase | 0.30 | EX31_RS24150 | | excinuclease ABC subunit UvrC | low | > 89 |
| Dickeya dadantii 3937 | 0.40 | DDA3937_RS06065 | | 4-hydroxy-tetrahydrodipicolinate synthase | 0.30 | DDA3937_RS13700 | | excinuclease ABC subunit UvrC | — | — |
| Castellaniella sp019104865 MT123 | 0.39 | ABCV34_RS15825 | | 4-hydroxy-tetrahydrodipicolinate synthase | 0.30 | ABCV34_RS06980 | | excinuclease ABC subunit UvrC | — | — |
| Acidovorax sp. GW101-3H11 | 0.39 | Ac3H11_277 | | 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) | 0.28 | Ac3H11_373 | | Excinuclease ABC subunit C | low | > 79 |
| Serratia liquefaciens MT49 | 0.39 | IAI46_18780 | | 4-hydroxy-tetrahydrodipicolinate synthase | 0.30 | IAI46_09210 | | excinuclease ABC subunit UvrC | low | > 86 |
| Dickeya dianthicola ME23 | 0.39 | DZA65_RS06460 | | 4-hydroxy-tetrahydrodipicolinate synthase | 0.30 | DZA65_RS14285 | | excinuclease ABC subunit UvrC | — | — |
| Marinobacter adhaerens HP15 | 0.39 | HP15_2027 | | dihydrodipicolinate synthase | 0.31 | HP15_1568 | | excinuclease ABC subunit C | — | — |
| Alteromonas macleodii MIT1002 | 0.38 | MIT1002_02207 | | 4-hydroxy-tetrahydrodipicolinate synthase | 0.31 | MIT1002_02153 | | Excinuclease ABC subunit C | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.38 | CSW01_10755 | | 4-hydroxy-tetrahydrodipicolinate synthase | 0.31 | CSW01_06140 | | excinuclease ABC subunit C | — | — |
| Shewanella loihica PV-4 | 0.36 | Shew_1848 | | dihydrodipicolinate synthase (RefSeq) | 0.30 | Shew_1825 | uvrC | excinuclease ABC subunit C (RefSeq) | — | — |
| Shewanella amazonensis SB2B | 0.36 | Sama_1908 | | dihydrodipicolinate synthase (RefSeq) | 0.31 | Sama_1608 | uvrC | excinuclease ABC subunit C (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.35 | SO1879 | dapA | dihydrodipicolinate synthase (NCBI ptt file) | 0.31 | SO1861 | uvrC | excinuclease ABC, C subunit (NCBI ptt file) | — | — |
| Shewanella sp. ANA-3 | 0.35 | Shewana3_1656 | | dihydrodipicolinate synthase (RefSeq) | 0.31 | Shewana3_1609 | uvrC | excinuclease ABC subunit C (RefSeq) | — | — |
| Phocaeicola dorei CL03T12C01 | 0.34 | ABI39_RS17235 | | 4-hydroxy-tetrahydrodipicolinate synthase | 0.20 | ABI39_RS05415 | | excinuclease ABC subunit UvrC | — | — |
| Phocaeicola vulgatus CL09T03C04 | 0.34 | HMPREF1058_RS03990 | | 4-hydroxy-tetrahydrodipicolinate synthase | 0.20 | HMPREF1058_RS11525 | | excinuclease ABC subunit UvrC | — | — |
| Parabacteroides merdae CL09T00C40 | 0.34 | HMPREF1078_RS01735 | | 4-hydroxy-tetrahydrodipicolinate synthase | 0.20 | HMPREF1078_RS06310 | | excinuclease ABC subunit UvrC | — | — |
| Bacteroides thetaiotaomicron VPI-5482 | 0.33 | BT0895 | | dihydrodipicolinate synthase (NCBI ptt file) | 0.20 | BT3266 | | excinuclease ABC subunit C (NCBI ptt file) | — | — |
| Bacteroides ovatus ATCC 8483 | 0.33 | BACOVA_02617 | | dihydrodipicolinate synthase | 0.20 | BACOVA_01365 | | excinuclease ABC, C subunit | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.33 | ABZR86_RS00785 | | 4-hydroxy-tetrahydrodipicolinate synthase | 0.33 | ABZR86_RS02245 | | excinuclease ABC subunit UvrC | — | — |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.32 | ABZR88_RS15585 | | 4-hydroxy-tetrahydrodipicolinate synthase | 0.20 | ABZR88_RS04150 | | excinuclease ABC subunit UvrC | — | — |
| Bacteroides stercoris CC31F | 0.32 | HMPREF1181_RS14165 | | 4-hydroxy-tetrahydrodipicolinate synthase | 0.20 | HMPREF1181_RS02095 | | excinuclease ABC subunit UvrC | — | — |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.31 | CA265_RS02050 | | 4-hydroxy-tetrahydrodipicolinate synthase | 0.19 | CA265_RS18110 | | excinuclease ABC subunit C | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.31 | LRK54_RS15085 | | 4-hydroxy-tetrahydrodipicolinate synthase | 0.35 | LRK54_RS00380 | | excinuclease ABC subunit UvrC | — | — |
| Rhodanobacter denitrificans MT42 | 0.31 | LRK55_RS14800 | | 4-hydroxy-tetrahydrodipicolinate synthase | 0.35 | LRK55_RS00120 | | excinuclease ABC subunit UvrC | — | — |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.30 | Echvi_3959 | | dihydrodipicolinate synthase | 0.22 | Echvi_0619 | | excinuclease ABC, C subunit | — | — |
| Mycobacterium tuberculosis H37Rv | 0.29 | Rv2753c | | Probable dihydrodipicolinate synthase DapA (DHDPS) (dihydrodipicolinate synthetase) | 0.23 | Rv1420 | | Probable excinuclease ABC (subunit C-nuclease) UvrC | — | — |
| Synechococcus elongatus PCC 7942 | 0.28 | Synpcc7942_1847 | dapA | dihydrodipicolinate synthase | 0.25 | Synpcc7942_1945 | uvrC | excinuclease ABC subunit C | — | — |
| Lysobacter sp. OAE881 | 0.28 | ABIE51_RS07995 | | 4-hydroxy-tetrahydrodipicolinate synthase | 0.33 | ABIE51_RS12455 | | excinuclease ABC subunit UvrC | — | — |
| Rhodanobacter sp. FW510-T8 | 0.27 | OKGIIK_03855 | dapA | 4-hydroxy-tetrahydrodipicolinate synthase | 0.34 | OKGIIK_06930 | uvrC | excinuclease ABC subunit UvrC | — | — |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.26 | CA264_04485 | | 4-hydroxy-tetrahydrodipicolinate synthase | 0.19 | CA264_16350 | | excinuclease ABC subunit C | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.26 | Xcc-8004.3085.1 | | 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) | 0.32 | Xcc-8004.2477.1 | | Excinuclease ABC subunit C | — | — |
Not shown: 8 genomes with orthologs for TX73_013920 only; 1 genomes with orthologs for TX73_006010 only