Conservation of cofitness between Psyr_4369 and Psyr_4270 in Pseudomonas syringae pv. syringae B728a

91 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4369 glutamate-5-semialdehyde dehydrogenase 1.0 Psyr_4270 serine hydroxymethyltransferase 0.86 14
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4369 glutamate-5-semialdehyde dehydrogenase 1.00 Psyr_4270 serine hydroxymethyltransferase 0.93 7
Pseudomonas fluorescens FW300-N2E3 0.88 AO353_06495 gamma-glutamyl phosphate reductase 0.97 AO353_14020 serine hydroxymethyltransferase — —
Pseudomonas fluorescens FW300-N2C3 0.88 AO356_15290 gamma-glutamyl phosphate reductase 0.97 AO356_15725 serine hydroxymethyltransferase — —
Pseudomonas sp. RS175 0.87 PFR28_03872 Gamma-glutamyl phosphate reductase 0.96 PFR28_03786 Serine hydroxymethyltransferase — —
Pseudomonas fluorescens FW300-N1B4 0.86 Pf1N1B4_2688 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.97 Pf1N1B4_2778 Serine hydroxymethyltransferase (EC 2.1.2.1) — —
Pseudomonas fluorescens FW300-N2E2 0.85 Pf6N2E2_4993 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.97 Pf6N2E2_5082 Serine hydroxymethyltransferase (EC 2.1.2.1) — —
Pseudomonas putida KT2440 0.85 PP_4811 Gamma-glutamyl phosphate reductase 0.96 PP_0671 serine hydroxymethyltransferase — —
Pseudomonas fluorescens GW456-L13 0.85 PfGW456L13_1356 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.97 PfGW456L13_1451 Serine hydroxymethyltransferase (EC 2.1.2.1) — —
Pseudomonas fluorescens SBW25-INTG 0.75 PFLU_RS26675 glutamate-5-semialdehyde dehydrogenase 0.98 PFLU_RS26195 serine hydroxymethyltransferase — —
Pseudomonas fluorescens SBW25 0.75 PFLU_RS26675 glutamate-5-semialdehyde dehydrogenase 0.98 PFLU_RS26195 serine hydroxymethyltransferase — —
Pseudomonas simiae WCS417 0.75 PS417_24745 gamma-glutamyl phosphate reductase 0.98 PS417_24280 serine hydroxymethyltransferase — —
Pseudomonas stutzeri RCH2 0.73 Psest_0508 gamma-glutamyl phosphate reductase 0.91 Psest_3404 Glycine/serine hydroxymethyltransferase — —
Pseudomonas sp. S08-1 0.72 OH686_09340 Gamma-glutamyl phosphate reductase 0.93 OH686_16230 Serine hydroxymethyltransferase — —
Marinobacter adhaerens HP15 0.70 HP15_601 gamma-glutamyl phosphate reductase 0.81 HP15_489 glycine hydroxymethyltransferase — —
Acinetobacter radioresistens SK82 0.67 MPMX26_00417 Gamma-glutamyl phosphate reductase 0.78 MPMX26_02049 Serine hydroxymethyltransferase — —
Ralstonia sp. UNC404CL21Col 0.61 ABZR87_RS01395 glutamate-5-semialdehyde dehydrogenase 0.64 ABZR87_RS08955 serine hydroxymethyltransferase — —
Dechlorosoma suillum PS 0.60 Dsui_1220 gamma-glutamyl phosphate reductase 0.65 Dsui_1265 glycine/serine hydroxymethyltransferase — —
Ralstonia solanacearum UW163 0.60 UW163_RS07800 glutamate-5-semialdehyde dehydrogenase 0.64 UW163_RS00670 serine hydroxymethyltransferase — —
Ralstonia solanacearum PSI07 0.60 RPSI07_RS11475 glutamate-5-semialdehyde dehydrogenase 0.63 RPSI07_RS20330 serine hydroxymethyltransferase 0.62 7
Ralstonia solanacearum IBSBF1503 0.60 RALBFv3_RS05825 glutamate-5-semialdehyde dehydrogenase 0.64 RALBFv3_RS12895 serine hydroxymethyltransferase — —
Ralstonia solanacearum GMI1000 0.59 RS_RS13715 gamma-glutamyl-phosphate reductase 0.64 RS_RS03670 serine hydroxymethyltransferase — —
Herbaspirillum seropedicae SmR1 0.59 HSERO_RS02965 gamma-glutamyl phosphate reductase 0.65 HSERO_RS06140 serine hydroxymethyltransferase — —
Castellaniella sp019104865 MT123 0.58 ABCV34_RS00845 glutamate-5-semialdehyde dehydrogenase 0.74 ABCV34_RS06400 serine hydroxymethyltransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.57 H281DRAFT_06324 glutamate-5-semialdehyde dehydrogenase 0.63 H281DRAFT_04726 serine hydroxymethyltransferase — —
Burkholderia phytofirmans PsJN 0.57 BPHYT_RS16770 gamma-glutamyl phosphate reductase 0.63 BPHYT_RS03725 serine hydroxymethyltransferase — —
Acidovorax sp. GW101-3H11 0.57 Ac3H11_704 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.64 Ac3H11_2921 Serine hydroxymethyltransferase (EC 2.1.2.1) — —
Cupriavidus basilensis FW507-4G11 0.56 RR42_RS17530 gamma-glutamyl phosphate reductase 0.65 RR42_RS15485 serine hydroxymethyltransferase — —
Variovorax sp. SCN45 0.56 GFF6326 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.64 GFF560 Serine hydroxymethyltransferase (EC 2.1.2.1) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.55 GFF2641 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.63 GFF5152 Serine hydroxymethyltransferase (EC 2.1.2.1) — —
Paraburkholderia graminis OAS925 0.55 ABIE53_003523 glutamate-5-semialdehyde dehydrogenase 0.63 ABIE53_000888 glycine hydroxymethyltransferase — —
Variovorax sp. OAS795 0.54 ABID97_RS04600 glutamate-5-semialdehyde dehydrogenase 0.64 ABID97_RS17890 serine hydroxymethyltransferase — —
Magnetospirillum magneticum AMB-1 0.50 AMB_RS20640 glutamate-5-semialdehyde dehydrogenase 0.55 AMB_RS11815 serine hydroxymethyltransferase — —
Azospirillum sp. SherDot2 0.48 MPMX19_01943 Gamma-glutamyl phosphate reductase 0.58 MPMX19_00727 Serine hydroxymethyltransferase 2 — —
Agrobacterium fabrum C58 0.48 Atu2779 gamma-glutamyl phosphate reductase 0.61 Atu1165 serine hydroxymethyltransferase — —
Sinorhizobium meliloti 1021 0.48 SMc03777 gamma-glutamyl phosphate reductase 0.59 SMc01770 serine hydroxymethyltransferase 0.91 24
Azospirillum brasilense Sp245 0.46 AZOBR_RS04075 gamma-glutamyl phosphate reductase 0.59 AZOBR_RS10015 serine hydroxymethyltransferase — —
Rhizobium sp. OAE497 0.46 ABIE40_RS18925 glutamate-5-semialdehyde dehydrogenase 0.60 ABIE40_RS06715 serine hydroxymethyltransferase — —
Caulobacter crescentus NA1000 Δfur 0.45 CCNA_03543 gamma-glutamyl phosphate reductase 0.56 CCNA_01419 serine hydroxymethyltransferase 0.57 42
Caulobacter crescentus NA1000 0.45 CCNA_03543 gamma-glutamyl phosphate reductase 0.56 CCNA_01419 serine hydroxymethyltransferase — —
Rhodanobacter denitrificans MT42 0.44 LRK55_RS02125 glutamate-5-semialdehyde dehydrogenase 0.73 LRK55_RS04400 serine hydroxymethyltransferase low > 63
Rhodanobacter denitrificans FW104-10B01 0.44 LRK54_RS02370 glutamate-5-semialdehyde dehydrogenase 0.73 LRK54_RS04625 serine hydroxymethyltransferase 0.58 54
Alteromonas macleodii MIT1002 0.44 MIT1002_01885 Gamma-glutamyl phosphate reductase 0.71 MIT1002_02702 Serine hydroxymethyltransferase 0.93 46
Lysobacter sp. OAE881 0.44 ABIE51_RS13365 glutamate-5-semialdehyde dehydrogenase 0.75 ABIE51_RS04620 serine hydroxymethyltransferase low > 62
Dyella japonica UNC79MFTsu3.2 0.44 ABZR86_RS08680 glutamate-5-semialdehyde dehydrogenase 0.76 ABZR86_RS10715 serine hydroxymethyltransferase 0.84 53
Klebsiella michiganensis M5al 0.44 BWI76_RS05835 gamma-glutamyl-phosphate reductase 0.74 BWI76_RS21225 serine hydroxymethyltransferase — —
Phaeobacter inhibens DSM 17395 0.44 PGA1_c15520 gamma-glutamyl phosphate reductase ProA 0.59 PGA1_c11870 serine hydroxymethyltransferase GlyA 0.82 7
Escherichia coli Nissle 1917 0.44 ECOLIN_RS01830 glutamate-5-semialdehyde dehydrogenase 0.75 ECOLIN_RS14440 serine hydroxymethyltransferase — —
Escherichia coli ECRC101 0.43 MCAODC_00190 proA glutamate-5-semialdehyde dehydrogenase 0.74 MCAODC_12040 glyA serine hydroxymethyltransferase low > 87
Escherichia coli ECRC62 0.43 BNILDI_00240 proA glutamate-5-semialdehyde dehydrogenase 0.75 BNILDI_11985 glyA serine hydroxymethyltransferase 0.84 69
Escherichia coli ECOR27 0.43 NOLOHH_02045 proA glutamate-5-semialdehyde dehydrogenase 0.75 NOLOHH_13185 glyA serine hydroxymethyltransferase 0.92 49
Escherichia coli ECRC102 0.43 NIAGMN_07530 proA glutamate-5-semialdehyde dehydrogenase 0.74 NIAGMN_19280 glyA serine hydroxymethyltransferase — —
Escherichia coli ECOR38 0.43 HEPCGN_07775 proA glutamate-5-semialdehyde dehydrogenase 0.75 HEPCGN_20655 glyA serine hydroxymethyltransferase 0.86 60
Escherichia coli BL21 0.43 ECD_00240 gamma-glutamylphosphate reductase 0.75 ECD_02443 serine hydroxymethyltransferase 0.72 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.43 OHPLBJKB_03397 Gamma-glutamyl phosphate reductase 0.75 OHPLBJKB_01156 Serine hydroxymethyltransferase low > 73
Escherichia coli ECRC98 0.43 JDDGAC_13295 proA glutamate-5-semialdehyde dehydrogenase 0.74 JDDGAC_25175 glyA serine hydroxymethyltransferase — —
Escherichia coli ECRC100 0.43 OKFHMN_09670 proA glutamate-5-semialdehyde dehydrogenase 0.74 OKFHMN_21510 glyA serine hydroxymethyltransferase 0.94 44
Escherichia coli ECRC99 0.43 KEDOAH_18485 proA glutamate-5-semialdehyde dehydrogenase 0.74 KEDOAH_06710 glyA serine hydroxymethyltransferase — —
Escherichia fergusonii Becca 0.43 EFB2_03777 Gamma-glutamyl phosphate reductase 0.75 EFB2_01345 Serine hydroxymethyltransferase — —
Escherichia coli BW25113 0.43 b0243 proA gamma-glutamyl phosphate reductase (NCBI) 0.75 b2551 glyA serine hydroxymethyltransferase (NCBI) — —
Enterobacter sp. TBS_079 0.43 MPMX20_00928 Gamma-glutamyl phosphate reductase 0.74 MPMX20_03420 Serine hydroxymethyltransferase — —
Enterobacter asburiae PDN3 0.43 EX28DRAFT_2650 glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) 0.74 EX28DRAFT_0099 Glycine/serine hydroxymethyltransferase — —
Dickeya dadantii 3937 0.43 DDA3937_RS16530 glutamate-5-semialdehyde dehydrogenase 0.77 DDA3937_RS15600 serine hydroxymethyltransferase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.43 GFF4115 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.74 GFF2447 Serine hydroxymethyltransferase (EC 2.1.2.1) — —
Shewanella sp. ANA-3 0.43 Shewana3_4057 glutamate-5-semialdehyde dehydrogenase (RefSeq) 0.77 Shewana3_1094 glyA serine hydroxymethyltransferase (RefSeq) low > 73
Desulfovibrio vulgaris Hildenborough JW710 0.43 DVU1953 proA gamma-glutamyl phosphate reductase (TIGR) 0.57 DVU1203 glyA serine hydroxymethyltransferase (TIGR) — —
Shewanella loihica PV-4 0.43 Shew_3015 gamma-glutamyl phosphate reductase (RefSeq) 0.79 Shew_1185 glyA serine hydroxymethyltransferase (RefSeq) low > 60
Rahnella sp. WP5 0.43 EX31_RS20975 glutamate-5-semialdehyde dehydrogenase 0.76 EX31_RS20585 serine hydroxymethyltransferase — —
Dickeya dianthicola ME23 0.42 DZA65_RS17690 glutamate-5-semialdehyde dehydrogenase 0.77 DZA65_RS16775 serine hydroxymethyltransferase — —
Serratia liquefaciens MT49 0.42 IAI46_04435 glutamate-5-semialdehyde dehydrogenase 0.76 IAI46_19395 serine hydroxymethyltransferase — —
Pantoea sp. MT58 0.41 IAI47_15115 glutamate-5-semialdehyde dehydrogenase 0.75 IAI47_04960 serine hydroxymethyltransferase — —
Kangiella aquimarina DSM 16071 0.41 B158DRAFT_1470 glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) 0.74 B158DRAFT_1908 Glycine/serine hydroxymethyltransferase low > 40
Rhodanobacter sp. FW510-T8 0.41 OKGIIK_09415 proA glutamate-5-semialdehyde dehydrogenase 0.74 OKGIIK_11440 glyA serine hydroxymethyltransferase low > 52
Xanthomonas campestris pv. campestris strain 8004 0.41 Xcc-8004.2327.1 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.75 Xcc-8004.4398.1 Serine hydroxymethyltransferase (EC 2.1.2.1) 0.76 28
Brevundimonas sp. GW460-12-10-14-LB2 0.41 A4249_RS16120 glutamate-5-semialdehyde dehydrogenase 0.54 A4249_RS06040 serine hydroxymethyltransferase — —
Erwinia tracheiphila SCR3 0.40 LU632_RS01190 proA glutamate-5-semialdehyde dehydrogenase 0.74 LU632_RS17915 serine hydroxymethyltransferase — —
Desulfovibrio vulgaris Miyazaki F 0.40 DvMF_0612 proA gamma-glutamyl phosphate reductase (RefSeq) 0.58 DvMF_3097 glyA serine hydroxymethyltransferase (RefSeq) — —
Mycobacterium tuberculosis H37Rv 0.40 Rv2427c Probable gamma-glutamyl phosphate reductase protein ProA (GPR) (glutamate-5-semialdehyde dehydrogenase) (glutamyl-gamma-semialdehyde dehydrogenase) 0.53 Rv0070c Serine hydroxymethyltransferase GlyA2 (serine methylase 2) (SHMT 2) low > 58
Dickeya dianthicola 67-19 0.40 HGI48_RS16600 glutamate-5-semialdehyde dehydrogenase 0.77 HGI48_RS15700 serine hydroxymethyltransferase — —
Pectobacterium carotovorum WPP14 0.40 HER17_RS04705 glutamate-5-semialdehyde dehydrogenase 0.77 HER17_RS05950 serine hydroxymethyltransferase — —
Shewanella oneidensis MR-1 0.39 SO1122 proA gamma-glutamyl phosphate reductase (NCBI ptt file) 0.77 SO3471 glyA serine hydroxymethyltransferase (NCBI ptt file) 0.94 45
Vibrio cholerae E7946 ATCC 55056 0.39 CSW01_11570 glutamate-5-semialdehyde dehydrogenase 0.73 CSW01_04820 serine hydroxymethyltransferase low > 62
Shewanella amazonensis SB2B 0.37 Sama_2515 proA gamma-glutamyl phosphate reductase (RefSeq) 0.76 Sama_1014 glyA serine hydroxymethyltransferase (RefSeq) 0.90 47
Synechococcus elongatus PCC 7942 0.36 Synpcc7942_2265 proA glutamate-5-semialdehyde dehydrogenase 0.59 Synpcc7942_0282 glyA serine hydroxymethyltransferase — —
Bacteroides stercoris CC31F 0.36 HMPREF1181_RS03320 glutamate-5-semialdehyde dehydrogenase 0.54 HMPREF1181_RS15010 serine hydroxymethyltransferase low > 56
Parabacteroides merdae CL09T00C40 0.35 HMPREF1078_RS10655 glutamate-5-semialdehyde dehydrogenase 0.52 HMPREF1078_RS02145 serine hydroxymethyltransferase low > 61
Bacteroides thetaiotaomicron VPI-5482 0.34 BT3718 gamma-glutamyl phosphate reductase (NCBI ptt file) 0.54 BT0738 serine hydroxymethyltransferase (NCBI ptt file) 0.85 36
Pedobacter sp. GW460-11-11-14-LB5 0.34 CA265_RS20850 glutamate-5-semialdehyde dehydrogenase 0.52 CA265_RS19165 serine hydroxymethyltransferase 0.89 42
Phocaeicola dorei CL03T12C01 0.33 ABI39_RS02875 glutamate-5-semialdehyde dehydrogenase 0.54 ABI39_RS17420 serine hydroxymethyltransferase 0.68 51
Phocaeicola vulgatus CL09T03C04 0.33 HMPREF1058_RS08645 glutamate-5-semialdehyde dehydrogenase 0.54 HMPREF1058_RS03800 serine hydroxymethyltransferase 0.81 39
Bacteroides ovatus ATCC 8483 0.32 BACOVA_03534 glutamate-5-semialdehyde dehydrogenase 0.54 BACOVA_02446 glycine hydroxymethyltransferase 0.96 12
Echinicola vietnamensis KMM 6221, DSM 17526 0.30 Echvi_2633 gamma-glutamylphosphate reductase (EC 1.2.1.41) (from data) 0.52 Echvi_1188 Glycine/serine hydroxymethyltransferase 0.83 35

Not shown: 9 genomes with orthologs for Psyr_4369 only; 0 genomes with orthologs for Psyr_4270 only