Conservation of cofitness between HER17_RS02805 and HER17_RS06935 in Pectobacterium carotovorum WPP14

92 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS02805 threonine synthase 1.0 HER17_RS06935 chorismate synthase 0.95 4
Dickeya dadantii 3937 0.88 DDA3937_RS18405 threonine synthase 0.90 DDA3937_RS14580 chorismate synthase — —
Dickeya dianthicola 67-19 0.87 HGI48_RS18335 threonine synthase 0.90 HGI48_RS14530 chorismate synthase — —
Dickeya dianthicola ME23 0.87 DZA65_RS19475 threonine synthase 0.90 DZA65_RS15465 chorismate synthase — —
Rahnella sp. WP5 0.86 EX31_RS03935 threonine synthase 0.87 EX31_RS19685 chorismate synthase — —
Serratia liquefaciens MT49 0.86 IAI46_03040 threonine synthase 0.91 IAI46_18025 chorismate synthase 0.68 43
Pantoea sp. MT58 0.83 IAI47_16205 threonine synthase 0.87 IAI47_06150 chorismate synthase — —
Erwinia tracheiphila SCR3 0.82 LU632_RS02620 thrC threonine synthase 0.87 LU632_RS07775 aroC chorismate synthase — —
Enterobacter asburiae PDN3 0.82 EX28DRAFT_3616 threonine synthase 0.83 EX28DRAFT_0275 chorismate synthase (EC 4.2.3.5) — —
Enterobacter sp. TBS_079 0.82 MPMX20_00712 Threonine synthase 0.83 MPMX20_03264 Chorismate synthase 0.88 41
Klebsiella michiganensis M5al 0.81 BWI76_RS04255 threonine synthase 0.83 BWI76_RS20435 chorismate synthase 0.68 69
Escherichia coli ECRC101 0.79 MCAODC_01615 thrC threonine synthase 0.85 MCAODC_13655 aroC chorismate synthase 0.82 48
Escherichia coli ECRC98 0.79 JDDGAC_14695 thrC threonine synthase 0.85 JDDGAC_26575 aroC chorismate synthase 0.86 37
Escherichia coli ECRC62 0.79 BNILDI_08170 thrC threonine synthase 0.85 BNILDI_13170 aroC chorismate synthase 0.89 31
Escherichia coli ECOR38 0.79 HEPCGN_09105 thrC threonine synthase 0.85 HEPCGN_21820 aroC chorismate synthase 0.89 43
Escherichia coli BL21 0.79 ECD_00004 L-threonine synthase 0.85 ECD_02254 chorismate synthase low > 61
Escherichia coli ECOR27 0.79 NOLOHH_03430 thrC threonine synthase 0.85 NOLOHH_14250 aroC chorismate synthase 0.94 27
Escherichia coli ECRC102 0.79 NIAGMN_08950 thrC threonine synthase 0.85 NIAGMN_20390 aroC chorismate synthase — —
Escherichia fergusonii Becca 0.79 EFB2_04039 Threonine synthase 0.85 EFB2_01529 Chorismate synthase low > 86
Escherichia coli ECRC99 0.79 KEDOAH_17055 thrC threonine synthase 0.85 KEDOAH_05580 aroC chorismate synthase — —
Escherichia coli ECRC100 0.79 OKFHMN_11100 thrC threonine synthase 0.85 OKFHMN_22615 aroC chorismate synthase 0.97 40
Escherichia coli HS(pFamp)R (ATCC 700891) 0.79 OHPLBJKB_03656 Threonine synthase 0.85 OHPLBJKB_01376 Chorismate synthase low > 73
Escherichia coli BW25113 0.79 b0004 thrC threonine synthase (NCBI) 0.85 b2329 aroC chorismate synthase (NCBI) 0.92 11
Escherichia coli Nissle 1917 0.79 ECOLIN_RS00020 threonine synthase 0.85 ECOLIN_RS13490 chorismate synthase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.79 GFF1080 Threonine synthase (EC 4.2.3.1) 0.84 GFF1950 Chorismate synthase (EC 4.2.3.5) low > 78
Vibrio cholerae E7946 ATCC 55056 0.69 CSW01_11965 threonine synthase 0.76 CSW01_10560 chorismate synthase low > 62
Alteromonas macleodii MIT1002 0.62 MIT1002_03084 Threonine synthase 0.75 MIT1002_01229 Chorismate synthase — —
Shewanella loihica PV-4 0.58 Shew_1081 threonine synthase (RefSeq) 0.76 Shew_2416 chorismate synthase (RefSeq) low > 60
Shewanella sp. ANA-3 0.55 Shewana3_1141 threonine synthase (RefSeq) 0.77 Shewana3_1469 chorismate synthase (RefSeq) 0.91 39
Shewanella amazonensis SB2B 0.55 Sama_0907 threonine synthase (RefSeq) 0.79 Sama_2159 chorismate synthase (RefSeq) — —
Bacteroides thetaiotaomicron VPI-5482 0.42 BT2401 threonine synthase (NCBI ptt file) 0.44 BT2084 chorismate synthase (NCBI ptt file) — —
Bacteroides ovatus ATCC 8483 0.41 BACOVA_03023 threonine synthase 0.44 BACOVA_03296 chorismate synthase low > 94
Phocaeicola vulgatus CL09T03C04 0.41 HMPREF1058_RS14730 threonine synthase 0.46 HMPREF1058_RS16730 chorismate synthase low > 67
Phocaeicola dorei CL03T12C01 0.41 ABI39_RS10440 threonine synthase 0.46 ABI39_RS12645 chorismate synthase 0.85 11
Bacteroides stercoris CC31F 0.41 HMPREF1181_RS00050 threonine synthase 0.45 HMPREF1181_RS08365 chorismate synthase — —
Parabacteroides merdae CL09T00C40 0.39 HMPREF1078_RS10395 threonine synthase 0.47 HMPREF1078_RS16710 chorismate synthase low > 61
Echinicola vietnamensis KMM 6221, DSM 17526 0.39 Echvi_2002 threonine synthase 0.47 Echvi_1518 chorismate synthase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.37 ABZR88_RS18960 threonine synthase 0.45 ABZR88_RS06995 chorismate synthase — —
Pedobacter sp. GW460-11-11-14-LB5 0.37 CA265_RS23465 threonine synthase 0.47 CA265_RS11645 chorismate synthase — —
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.2954.1 Threonine synthase (EC 4.2.3.1) 0.64 Xcc-8004.1955.1 Chorismate synthase (EC 4.2.3.5) 0.75 55
Phaeobacter inhibens DSM 17395 0.29 PGA1_c06310 threonine synthase ThrC 0.54 PGA1_c34060 chorismate synthase AroC — —
Lysobacter sp. OAE881 0.29 ABIE51_RS17530 threonine synthase 0.64 ABIE51_RS08220 chorismate synthase — —
Pseudomonas putida KT2440 0.28 PP_1471 Threonine synthase 0.68 PP_1830 Chorismate synthase — —
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_06370 threonine synthase 0.67 AO356_19540 chorismate synthase — —
Pseudomonas fluorescens FW300-N2E3 0.28 AO353_04350 threonine synthase 0.66 AO353_02250 chorismate synthase — —
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_3142 Threonine synthase (EC 4.2.3.1) 0.67 Pf6N2E2_5822 Chorismate synthase (EC 4.2.3.5) — —
Pseudomonas syringae pv. syringae B728a 0.28 Psyr_1291 L-threonine synthase 0.67 Psyr_1853 chorismate synthase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.28 Psyr_1291 L-threonine synthase 0.67 Psyr_1853 chorismate synthase — —
Rhodanobacter denitrificans MT42 0.28 LRK55_RS09995 threonine synthase 0.66 LRK55_RS01505 chorismate synthase 0.65 57
Rhodanobacter denitrificans FW104-10B01 0.28 LRK54_RS10355 threonine synthase 0.66 LRK54_RS01725 chorismate synthase — —
Pseudomonas sp. S08-1 0.28 OH686_17765 threonine synthase 0.66 OH686_00675 chorismate synthase — —
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_3014 Threonine synthase (EC 4.2.3.1) 0.66 Pf1N1B4_3780 Chorismate synthase (EC 4.2.3.5) — —
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_1724 Threonine synthase (EC 4.2.3.1) 0.66 PfGW456L13_4165 Chorismate synthase (EC 4.2.3.5) — —
Pseudomonas simiae WCS417 0.28 PS417_22880 threonine synthase 0.66 PS417_19315 chorismate synthase — —
Pseudomonas fluorescens SBW25 0.27 PFLU_RS24545 threonine synthase 0.66 PFLU_RS21280 chorismate synthase — —
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS24545 threonine synthase 0.66 PFLU_RS21280 chorismate synthase — —
Pseudomonas sp. RS175 0.27 PFR28_00334 Threonine synthase 0.65 PFR28_03126 Chorismate synthase — —
Dyella japonica UNC79MFTsu3.2 0.27 ABZR86_RS15975 threonine synthase (EC 4.2.3.1) (from data) 0.69 ABZR86_RS08040 chorismate synthase 0.91 63
Rhodanobacter sp. FW510-T8 0.27 OKGIIK_13570 thrC threonine synthase 0.68 OKGIIK_04805 aroC chorismate synthase low > 52
Caulobacter crescentus NA1000 0.27 CCNA_03510 threonine synthase 0.49 CCNA_03256 chorismate synthase — —
Sinorhizobium meliloti 1021 0.27 SMc00077 threonine synthase 0.49 SMc00007 chorismate synthase — —
Caulobacter crescentus NA1000 Δfur 0.27 CCNA_03510 threonine synthase 0.49 CCNA_03256 chorismate synthase — —
Pseudomonas stutzeri RCH2 0.27 Psest_3125 threonine synthase 0.66 Psest_1903 chorismate synthase — —
Bosea sp. OAE506 0.27 ABIE41_RS22985 threonine synthase 0.60 ABIE41_RS10190 chorismate synthase — —
Dinoroseobacter shibae DFL-12 0.26 Dshi_1146 threonine synthase (RefSeq) 0.54 Dshi_3275 Chorismate synthase (RefSeq) — —
Rhodospirillum rubrum S1H 0.26 Rru_A3233 Threonine synthase (NCBI) 0.60 Rru_A2623 Chorismate synthase (NCBI) — —
Azospirillum sp. SherDot2 0.26 MPMX19_00671 Threonine synthase 0.57 MPMX19_01810 Chorismate synthase — —
Agrobacterium fabrum C58 0.26 Atu0787 threonine synthase 0.51 Atu0754 chorismate synthase — —
Rhizobium sp. OAE497 0.26 ABIE40_RS04230 threonine synthase 0.51 ABIE40_RS03980 chorismate synthase — —
Azospirillum brasilense Sp245 0.26 AZOBR_RS10545 threonine synthase 0.60 AZOBR_RS10730 chorismate synthase — —
Marinobacter adhaerens HP15 0.25 HP15_765 threonine synthase 0.72 HP15_1838 chorismate synthase — —
Rhodopseudomonas palustris CGA009 0.25 TX73_004325 threonine synthase 0.61 TX73_006170 chorismate synthase — —
Castellaniella sp019104865 MT123 0.24 ABCV34_RS02300 threonine synthase 0.64 ABCV34_RS04300 chorismate synthase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.24 A4249_RS00020 threonine synthase 0.51 A4249_RS08790 chorismate synthase — —
Magnetospirillum magneticum AMB-1 0.24 AMB_RS17140 threonine synthase 0.63 AMB_RS08025 chorismate synthase — —
Sphingomonas koreensis DSMZ 15582 0.23 Ga0059261_1999 threonine synthase 0.50 Ga0059261_2470 chorismate synthase (EC 4.2.3.5) — —
Dechlorosoma suillum PS 0.23 Dsui_2904 threonine synthase 0.67 Dsui_3204 chorismate synthase — —
Variovorax sp. OAS795 0.22 ABID97_RS25760 threonine synthase 0.60 ABID97_RS19805 chorismate synthase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.22 GFF3936 Threonine synthase (EC 4.2.3.1) 0.63 GFF5239 Chorismate synthase (EC 4.2.3.5) — —
Ralstonia sp. UNC404CL21Col 0.22 ABZR87_RS05865 threonine synthase 0.64 ABZR87_RS13790 chorismate synthase low > 80
Paraburkholderia sabiae LMG 24235 0.22 QEN71_RS22400 threonine synthase 0.67 QEN71_RS05215 chorismate synthase 0.86 9
Variovorax sp. SCN45 0.21 GFF2800 Threonine synthase (EC 4.2.3.1) 0.59 GFF2627 Chorismate synthase (EC 4.2.3.5) — —
Herbaspirillum seropedicae SmR1 0.21 HSERO_RS10470 threonine synthase 0.63 HSERO_RS16525 chorismate synthase — —
Acidovorax sp. GW101-3H11 0.21 Ac3H11_1505 Threonine synthase (EC 4.2.3.1) 0.63 Ac3H11_2925 Chorismate synthase (EC 4.2.3.5) — —
Cupriavidus basilensis FW507-4G11 0.21 RR42_RS12535 threonine synthase 0.65 RR42_RS06485 chorismate synthase — —
Paraburkholderia graminis OAS925 0.21 ABIE53_002027 threonine synthase 0.67 ABIE53_002916 chorismate synthase — —
Bifidobacterium breve UCC2003 0.21 BBR_RS14070 threonine synthase 0.24 BBR_RS15080 chorismate synthase low > 34
Paraburkholderia bryophila 376MFSha3.1 0.21 H281DRAFT_00811 L-threonine synthase 0.67 H281DRAFT_04489 chorismate synthase — —
Ralstonia solanacearum GMI1000 0.20 RS_RS06660 threonine synthase 0.63 RS_RS07885 chorismate synthase — —
Burkholderia phytofirmans PsJN 0.20 BPHYT_RS08960 threonine synthase 0.66 BPHYT_RS13705 chorismate synthase 0.62 60
Ralstonia solanacearum UW163 0.20 UW163_RS13325 threonine synthase 0.63 UW163_RS15160 chorismate synthase — —
Ralstonia solanacearum IBSBF1503 0.20 RALBFv3_RS15880 threonine synthase 0.63 RALBFv3_RS01850 chorismate synthase — —
Ralstonia solanacearum PSI07 0.19 RPSI07_RS17485 threonine synthase 0.63 RPSI07_RS15640 chorismate synthase — —

Not shown: 1 genomes with orthologs for HER17_RS02805 only; 10 genomes with orthologs for HER17_RS06935 only