Conservation of cofitness between Ga0059261_2764 and Ga0059261_1026 in Sphingomonas koreensis DSMZ 15582

90 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingomonas koreensis DSMZ 15582 1.0 Ga0059261_2764 Site-specific recombinase XerD 1.0 Ga0059261_1026 DNA repair protein RecN 0.35 19
Brevundimonas sp. GW460-12-10-14-LB2 0.48 A4249_RS12210 tyrosine recombinase XerC 0.34 A4249_RS02620 DNA repair protein RecN low > 48
Caulobacter crescentus NA1000 0.47 CCNA_00349 integrase/recombinase, XerC-CodV family 0.39 CCNA_02062 DNA repair protein recN 0.63 12
Caulobacter crescentus NA1000 Δfur 0.47 CCNA_00349 integrase/recombinase, XerC-CodV family 0.39 CCNA_02062 DNA repair protein recN low > 67
Dinoroseobacter shibae DFL-12 0.44 Dshi_5002 xerC hypothetical protein (NCBI) 0.36 Dshi_2413 DNA repair protein RecN (RefSeq) — —
Phaeobacter inhibens DSM 17395 0.44 PGA1_c05760 putative tyrosine recombinase XerC 0.39 PGA1_c09720 DNA repair protein RecN 0.42 13
Magnetospirillum magneticum AMB-1 0.43 AMB_RS21485 tyrosine recombinase XerC 0.43 AMB_RS19520 DNA repair protein RecN — —
Agrobacterium fabrum C58 0.43 Atu2628 site-specific recombinase 0.42 Atu2083 DNA repair protein RecN — —
Sinorhizobium meliloti 1021 0.42 SMc02489 site-specific tyrosine recombinase XerC 0.41 SMc01877 DNA repair protein — —
Rhodopseudomonas palustris CGA009 0.42 TX73_000945 tyrosine recombinase XerC 0.41 TX73_018240 DNA repair protein RecN 0.42 5
Azospirillum brasilense Sp245 0.41 AZOBR_RS03965 tyrosine recombinase XerC 0.44 AZOBR_RS12395 DNA repair protein RecN — —
Bosea sp. OAE506 0.41 ABIE41_RS07870 tyrosine recombinase XerC 0.44 ABIE41_RS12645 DNA repair protein RecN 0.71 3
Rhodospirillum rubrum S1H 0.41 Rru_A1220 Phage integrase (NCBI) 0.40 Rru_A0940 DNA repair protein RecN (NCBI) — —
Azospirillum sp. SherDot2 0.40 MPMX19_02110 Tyrosine recombinase XerC 0.45 MPMX19_01601 DNA repair protein RecN — —
Dechlorosoma suillum PS 0.27 Dsui_0651 tyrosine recombinase XerC 0.28 Dsui_3072 DNA repair protein RecN low > 51
Lysobacter sp. OAE881 0.27 ABIE51_RS03035 tyrosine recombinase XerC 0.30 ABIE51_RS11655 DNA repair protein RecN 0.71 35
Paraburkholderia bryophila 376MFSha3.1 0.27 H281DRAFT_02202 integrase/recombinase XerC 0.27 H281DRAFT_04692 DNA replication and repair protein RecN — —
Burkholderia phytofirmans PsJN 0.27 BPHYT_RS01655 tyrosine recombinase XerC 0.27 BPHYT_RS03560 DNA repair protein — —
Dyella japonica UNC79MFTsu3.2 0.27 ABZR86_RS15025 tyrosine recombinase XerC 0.28 ABZR86_RS05665 DNA repair protein RecN 0.65 11
Shewanella loihica PV-4 0.27 Shew_0325 tyrosine recombinase XerC (RefSeq) 0.28 Shew_1196 recombination and repair protein (RefSeq) low > 60
Paraburkholderia graminis OAS925 0.27 ABIE53_000426 integrase/recombinase XerC 0.27 ABIE53_000856 DNA repair protein RecN (Recombination protein N) — —
Alteromonas macleodii MIT1002 0.26 MIT1002_00157 Tyrosine recombinase XerC 0.25 MIT1002_01443 Recombination protein N low > 70
Pseudomonas fluorescens FW300-N2C3 0.26 AO356_12725 recombinase XerC 0.29 AO356_07510 DNA repair protein RecN low > 104
Pseudomonas fluorescens GW456-L13 0.26 PfGW456L13_842 Tyrosine recombinase XerC 0.30 PfGW456L13_5106 DNA repair protein RecN low > 87
Acinetobacter radioresistens SK82 0.26 MPMX26_02230 Tyrosine recombinase XerC 0.24 MPMX26_00239 DNA repair protein RecN — —
Pseudomonas fluorescens FW300-N2E2 0.26 Pf6N2E2_4416 Tyrosine recombinase XerC 0.30 Pf6N2E2_3370 DNA repair protein RecN 0.36 12
Pseudomonas fluorescens FW300-N1B4 0.26 Pf1N1B4_2171 Tyrosine recombinase XerC 0.30 Pf1N1B4_1178 DNA repair protein RecN low > 87
Kangiella aquimarina DSM 16071 0.26 B158DRAFT_0244 tyrosine recombinase XerC subunit 0.32 B158DRAFT_0601 DNA replication and repair protein RecN low > 40
Pseudomonas sp. RS175 0.26 PFR28_04378 Tyrosine recombinase XerC 0.29 PFR28_00071 DNA repair protein RecN 0.23 71
Mucilaginibacter yixingensis YX-36 DSM 26809 0.26 ABZR88_RS17800 tyrosine-type recombinase/integrase 0.25 ABZR88_RS06580 DNA repair protein RecN low > 71
Pseudomonas syringae pv. syringae B728a 0.26 Psyr_0185 tyrosine recombinase XerC subunit 0.29 Psyr_4197 DNA replication and repair protein RecN 0.38 4
Echinicola vietnamensis KMM 6221, DSM 17526 0.26 Echvi_0827 Site-specific recombinase XerD 0.24 Echvi_2067 DNA repair protein RecN low > 79
Pseudomonas fluorescens FW300-N2E3 0.26 AO353_09050 recombinase XerC 0.29 AO353_05660 DNA repair protein RecN 0.41 7
Pseudomonas syringae pv. syringae B728a ΔmexB 0.26 Psyr_0185 tyrosine recombinase XerC subunit 0.29 Psyr_4197 DNA replication and repair protein RecN low > 86
Pseudomonas putida KT2440 0.26 PP_5230 Tyrosine recombinase XerC 0.27 PP_4729 factor used in recombination and DNA repair low > 96
Paraburkholderia sabiae LMG 24235 0.26 QEN71_RS00355 tyrosine recombinase XerC 0.28 QEN71_RS26535 DNA repair protein RecN — —
Marinobacter adhaerens HP15 0.26 HP15_250 site-specific tyrosine recombinase XerC 0.32 HP15_3084 DNA repair protein RecN low > 73
Xanthomonas campestris pv. campestris strain 8004 0.25 Xcc-8004.847.1 Site-specific tyrosine recombinase 0.29 Xcc-8004.3431.1 DNA repair protein RecN — —
Pseudomonas sp. S08-1 0.25 OH686_13785 tyrosine recombinase XerC 0.31 OH686_17050 DNA repair protein RecN low > 80
Shewanella sp. ANA-3 0.25 Shewana3_0393 tyrosine recombinase XerC (RefSeq) 0.29 Shewana3_1104 recombination and repair protein (RefSeq) low > 73
Rhodanobacter denitrificans MT42 0.25 LRK55_RS08300 tyrosine recombinase XerC 0.27 LRK55_RS17815 DNA repair protein RecN low > 63
Bacteroides ovatus ATCC 8483 0.25 BACOVA_01050 site-specific recombinase, phage integrase family/ribosomal subunit interface protein 0.24 BACOVA_00200 DNA repair protein RecN low > 94
Pedobacter sp. GW460-11-11-14-LB5 0.25 CA265_RS02835 integrase 0.22 CA265_RS14855 DNA repair protein RecN 0.50 5
Rhodanobacter sp. FW510-T8 0.25 OKGIIK_15325 xerC tyrosine recombinase XerC 0.28 OKGIIK_07340 recN DNA repair protein RecN — —
Cupriavidus basilensis FW507-4G11 0.25 RR42_RS00615 recombinase XerC 0.30 RR42_RS05910 DNA repair protein low > 128
Hydrogenophaga sp. GW460-11-11-14-LB1 0.25 GFF547 Tyrosine recombinase XerC 0.29 GFF829 DNA repair protein RecN low > 90
Pantoea sp. MT58 0.25 IAI47_18400 tyrosine recombinase XerC 0.30 IAI47_04810 DNA repair protein RecN 0.34 56
Herbaspirillum seropedicae SmR1 0.25 HSERO_RS21475 recombinase XerC 0.28 HSERO_RS03060 DNA repair protein low > 78
Rhodanobacter denitrificans FW104-10B01 0.25 LRK54_RS08535 tyrosine recombinase XerC 0.27 LRK54_RS17960 DNA repair protein RecN low > 59
Vibrio cholerae E7946 ATCC 55056 0.25 CSW01_00650 tyrosine recombinase XerC 0.27 CSW01_04395 DNA repair protein RecN 0.55 38
Variovorax sp. SCN45 0.25 GFF4490 Site-specific tyrosine recombinase XerC 0.28 GFF2357 DNA repair protein RecN low > 127
Castellaniella sp019104865 MT123 0.24 ABCV34_RS13455 tyrosine recombinase XerC 0.30 ABCV34_RS07470 DNA repair protein RecN low > 48
Erwinia tracheiphila SCR3 0.24 LU632_RS24135 xerC tyrosine recombinase XerC 0.28 LU632_RS16985 recN DNA repair protein RecN — —
Acidovorax sp. GW101-3H11 0.24 Ac3H11_1995 Tyrosine recombinase XerC 0.29 Ac3H11_3460 DNA repair protein RecN low > 79
Pseudomonas fluorescens SBW25-INTG 0.24 PFLU_RS29280 tyrosine recombinase XerC 0.28 PFLU_RS25910 DNA repair protein RecN 0.32 32
Pseudomonas simiae WCS417 0.24 PS417_27595 recombinase XerC 0.28 PS417_24070 recombination and repair protein 0.26 66
Pseudomonas fluorescens SBW25 0.24 PFLU_RS29280 tyrosine recombinase XerC 0.28 PFLU_RS25910 DNA repair protein RecN low > 109
Bifidobacterium breve UCC2003 0.24 BBR_RS16755 site-specific tyrosine recombinase XerD 0.16 BBR_RS14030 DNA repair protein RecN low > 34
Bacteroides thetaiotaomicron VPI-5482 0.24 BT2742 integrase, site-specific recombinase (NCBI ptt file) 0.25 BT1361 DNA repair protein recN (Recombination protein N) (NCBI ptt file) low > 81
Ralstonia solanacearum PSI07 0.24 RPSI07_RS23690 tyrosine recombinase XerC 0.29 RPSI07_RS11890 DNA repair protein RecN low > 81
Ralstonia solanacearum GMI1000 0.24 RS_RS00260 Tyrosine recombinase XerC 1 0.29 RS_RS13275 DNA repair protein RecN low > 80
Rahnella sp. WP5 0.24 EX31_RS15165 tyrosine recombinase XerC 0.30 EX31_RS21760 DNA repair protein RecN low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.23 GFF239 Tyrosine recombinase XerC 0.29 GFF4162 DNA repair protein RecN — —
Dickeya dianthicola 67-19 0.23 HGI48_RS20045 tyrosine recombinase XerC 0.28 HGI48_RS04320 DNA repair protein RecN low > 71
Ralstonia solanacearum IBSBF1503 0.23 RALBFv3_RS09675 tyrosine recombinase XerC 0.29 RALBFv3_RS05415 DNA repair protein RecN 0.45 1
Bacteroides stercoris CC31F 0.23 HMPREF1181_RS00625 tyrosine recombinase XerC 0.25 HMPREF1181_RS10900 DNA repair protein RecN low > 56
Escherichia coli ECRC102 0.23 NIAGMN_12175 xerC tyrosine recombinase XerC 0.29 NIAGMN_18915 recN DNA repair protein RecN — —
Escherichia coli ECRC98 0.23 JDDGAC_18045 xerC tyrosine recombinase XerC 0.29 JDDGAC_24810 recN DNA repair protein RecN — —
Escherichia coli ECRC99 0.23 KEDOAH_13730 xerC tyrosine recombinase XerC 0.29 KEDOAH_07075 recN DNA repair protein RecN — —
Escherichia coli ECRC101 0.23 MCAODC_04925 xerC tyrosine recombinase XerC 0.29 MCAODC_11670 recN DNA repair protein RecN — —
Escherichia coli ECRC100 0.23 OKFHMN_14420 xerC tyrosine recombinase XerC 0.29 OKFHMN_21145 recN DNA repair protein RecN low > 80
Ralstonia solanacearum UW163 0.23 UW163_RS03905 tyrosine recombinase XerC 0.29 UW163_RS08210 DNA repair protein RecN — —
Escherichia coli BL21 0.23 ECD_03687 site-specific tyrosine recombinase 0.29 ECD_02504 recombination and repair protein low > 61
Dickeya dianthicola ME23 0.23 DZA65_RS21090 tyrosine recombinase XerC 0.28 DZA65_RS04235 DNA repair protein RecN low > 75
Klebsiella michiganensis M5al 0.23 BWI76_RS01210 tyrosine recombinase XerC 0.27 BWI76_RS21560 DNA repair protein RecN low > 92
Enterobacter asburiae PDN3 0.23 EX28DRAFT_4480 tyrosine recombinase XerC 0.28 EX28DRAFT_2719 DNA repair protein RecN — —
Escherichia coli BW25113 0.23 b3811 xerC site-specific tyrosine recombinase XerC (NCBI) 0.29 b2616 recN recombination and repair protein (NCBI) low > 76
Escherichia coli ECRC62 0.23 BNILDI_04985 xerC tyrosine recombinase XerC 0.29 BNILDI_11620 recN DNA repair protein RecN low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.23 OHPLBJKB_04239 Tyrosine recombinase XerC 0.29 OHPLBJKB_01091 DNA repair protein RecN low > 73
Escherichia fergusonii Becca 0.23 EFB2_04826 Tyrosine recombinase XerC 0.29 EFB2_01277 DNA repair protein RecN low > 86
Escherichia coli ECOR38 0.23 HEPCGN_13125 xerC tyrosine recombinase XerC 0.29 HEPCGN_20265 recN DNA repair protein RecN low > 87
Escherichia coli ECOR27 0.23 NOLOHH_06550 xerC tyrosine recombinase XerC 0.29 NOLOHH_12815 recN DNA repair protein RecN low > 75
Pseudomonas stutzeri RCH2 0.23 Psest_3767 tyrosine recombinase XerC 0.29 Psest_0962 DNA repair protein RecN 0.37 5
Escherichia coli Nissle 1917 0.23 ECOLIN_RS21875 tyrosine recombinase XerC 0.29 ECOLIN_RS14775 DNA repair protein RecN low > 55
Mycobacterium tuberculosis H37Rv 0.22 Rv2894c Probable integrase/recombinase XerC 0.20 Rv1696 Probable DNA repair protein RecN (recombination protein N) — —
Phocaeicola vulgatus CL09T03C04 0.22 HMPREF1058_RS09445 tyrosine-type recombinase/integrase 0.25 HMPREF1058_RS18225 DNA repair protein RecN low > 67
Ralstonia sp. UNC404CL21Col 0.22 ABZR87_RS05065 tyrosine recombinase XerC 0.29 ABZR87_RS01065 DNA repair protein RecN low > 80
Pontibacter actiniarum KMM 6156, DSM 19842 0.22 CA264_19035 integrase 0.21 CA264_13235 DNA repair protein RecN — —
Parabacteroides merdae CL09T00C40 0.22 HMPREF1078_RS10885 tyrosine recombinase XerC 0.26 HMPREF1078_RS02000 DNA repair protein RecN low > 61
Phocaeicola dorei CL03T12C01 0.22 ABI39_RS03835 tyrosine-type recombinase/integrase 0.25 ABI39_RS14500 DNA repair protein RecN — —
Desulfovibrio vulgaris Miyazaki F 0.21 DvMF_0767 integrase family protein (RefSeq) 0.19 DvMF_0923 SMC domain protein (RefSeq) low > 51

Not shown: 2 genomes with orthologs for Ga0059261_2764 only; 9 genomes with orthologs for Ga0059261_1026 only