Conservation of cofitness between GFF651 and GFF4044 in Hydrogenophaga sp. GW460-11-11-14-LB1

96 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF651 Aspartate carbamoyltransferase (EC 2.1.3.2) 1.0 GFF4044 ATP-dependent protease La (EC 3.4.21.53) Type I 0.69 13
Variovorax sp. OAS795 0.90 ABID97_RS24660 aspartate carbamoyltransferase catalytic subunit 0.83 ABID97_RS17590 endopeptidase La low > 91
Variovorax sp. SCN45 0.89 GFF2160 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.82 GFF487 ATP-dependent protease La (EC 3.4.21.53) Type I 0.54 80
Acidovorax sp. GW101-3H11 0.89 Ac3H11_3978 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.86 Ac3H11_937 ATP-dependent protease La (EC 3.4.21.53) Type I — —
Cupriavidus basilensis FW507-4G11 0.82 RR42_RS15860 aspartate carbamoyltransferase catalytic subunit 0.76 RR42_RS09030 DNA-binding protein — —
Ralstonia solanacearum GMI1000 0.82 RS_RS03410 aspartate carbamoyltransferase 0.76 RS_RS08655 endopeptidase La — —
Ralstonia solanacearum PSI07 0.82 RPSI07_RS20635 aspartate carbamoyltransferase catalytic subunit 0.77 RPSI07_RS16135 endopeptidase La — —
Paraburkholderia graminis OAS925 0.81 ABIE53_001131 aspartate carbamoyltransferase catalytic subunit 0.74 ABIE53_002117 ATP-dependent Lon protease low > 113
Ralstonia solanacearum UW163 0.81 UW163_RS00940 aspartate carbamoyltransferase catalytic subunit 0.76 UW163_RS14650 endopeptidase La — —
Ralstonia solanacearum IBSBF1503 0.81 RALBFv3_RS12625 aspartate carbamoyltransferase catalytic subunit 0.76 RALBFv3_RS01340 endopeptidase La — —
Paraburkholderia bryophila 376MFSha3.1 0.81 H281DRAFT_04817 aspartate carbamoyltransferase 0.76 H281DRAFT_00898 ATP-dependent proteinase. Serine peptidase. MEROPS family S16 — —
Ralstonia sp. UNC404CL21Col 0.81 ABZR87_RS08625 aspartate carbamoyltransferase catalytic subunit 0.77 ABZR87_RS12785 endopeptidase La 0.50 58
Burkholderia phytofirmans PsJN 0.81 BPHYT_RS04235 aspartate carbamoyltransferase 0.76 BPHYT_RS09460 peptidase — —
Paraburkholderia sabiae LMG 24235 0.81 QEN71_RS25780 aspartate carbamoyltransferase catalytic subunit 0.77 QEN71_RS21975 endopeptidase La low > 153
Herbaspirillum seropedicae SmR1 0.80 HSERO_RS02330 aspartate carbamoyltransferase 0.76 HSERO_RS12905 peptidase — —
Dechlorosoma suillum PS 0.76 Dsui_0596 aspartate carbamoyltransferase 0.72 Dsui_2198 ATP-dependent protease La — —
Pseudomonas sp. S08-1 0.66 OH686_10940 aspartate carbamoyltransferase 0.63 OH686_03635 endopeptidase La — —
Pseudomonas stutzeri RCH2 0.66 Psest_0291 aspartate carbamoyltransferase 0.64 Psest_2285 ATP-dependent protease La — —
Pseudomonas putida KT2440 0.66 PP_4998 Aspartate carbamoyltransferase 0.64 PP_2302 DNA-binding, ATP-dependent protease — —
Pseudomonas simiae WCS417 0.65 PS417_26700 aspartate carbamoyltransferase catalytic subunit 0.65 PS417_17225 DNA-binding protein — —
Pseudomonas fluorescens SBW25 0.65 PFLU_RS28345 aspartate carbamoyltransferase 0.65 PFLU_RS19160 endopeptidase La — —
Pseudomonas fluorescens SBW25-INTG 0.65 PFLU_RS28345 aspartate carbamoyltransferase 0.65 PFLU_RS19160 endopeptidase La — —
Pseudomonas fluorescens GW456-L13 0.65 PfGW456L13_1016 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.65 PfGW456L13_2554 ATP-dependent protease La (EC 3.4.21.53) Type I — —
Pseudomonas fluorescens FW300-N2E3 0.65 AO353_08135 aspartate carbamoyltransferase catalytic subunit 0.65 AO353_20185 DNA-binding protein — —
Pseudomonas fluorescens FW300-N2C3 0.65 AO356_13450 aspartate carbamoyltransferase catalytic subunit 0.65 AO356_01740 DNA-binding protein — —
Pseudomonas fluorescens FW300-N2E2 0.65 Pf6N2E2_4606 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.65 Pf6N2E2_2216 ATP-dependent protease La (EC 3.4.21.53) Type I — —
Pseudomonas fluorescens FW300-N1B4 0.65 Pf1N1B4_2347 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.65 Pf1N1B4_3947 ATP-dependent protease La (EC 3.4.21.53) Type I — —
Pseudomonas sp. RS175 0.65 PFR28_04237 Aspartate carbamoyltransferase 0.65 PFR28_01230 Lon protease — —
Pseudomonas syringae pv. syringae B728a 0.65 Psyr_0482 aspartate carbamoyltransferase 0.65 Psyr_1749 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.65 Psyr_0482 aspartate carbamoyltransferase 0.65 Psyr_1749 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 — —
Marinobacter adhaerens HP15 0.62 HP15_3507 aspartate carbamoyltransferase 0.63 HP15_2183 DNA-binding ATP-dependent protease La low > 73
Acinetobacter radioresistens SK82 0.59 MPMX26_01099 Aspartate carbamoyltransferase 0.53 MPMX26_02299 Lon protease low > 36
Sinorhizobium meliloti 1021 0.49 SMc01360 aspartate carbamoyltransferase catalytic subunit 0.59 SMc01905 ATP-dependent protease LA protein — —
Rhodospirillum rubrum S1H 0.49 Rru_A3190 Aspartate carbamoyltransferase (NCBI) 0.62 Rru_A1552 Peptidase S16, ATP-dependent protease La (NCBI) low > 58
Rhizobium sp. OAE497 0.47 ABIE40_RS07385 aspartate carbamoyltransferase catalytic subunit 0.59 ABIE40_RS07100 endopeptidase La — —
Agrobacterium fabrum C58 0.47 Atu1308 aspartate carbamoyl transferase catalytic subunit 0.60 Atu1261 ATP-dependent protease LA — —
Magnetospirillum magneticum AMB-1 0.47 AMB_RS18300 aspartate carbamoyltransferase 0.63 AMB_RS14035 endopeptidase La — —
Azospirillum sp. SherDot2 0.47 MPMX19_01054 Aspartate carbamoyltransferase 0.63 MPMX19_01545 Lon protease low > 112
Bosea sp. OAE506 0.46 ABIE41_RS17230 aspartate carbamoyltransferase catalytic subunit 0.59 ABIE41_RS18050 endopeptidase La — —
Azospirillum brasilense Sp245 0.46 AZOBR_RS20575 aspartate carbamoyltransferase 0.62 AZOBR_RS07145 peptidase low > 97
Xanthomonas campestris pv. campestris strain 8004 0.46 Xcc-8004.1722.1 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.62 Xcc-8004.4046.1 ATP-dependent protease La (EC 3.4.21.53) Type I — —
Brevundimonas sp. GW460-12-10-14-LB2 0.46 A4249_RS04260 aspartate carbamoyltransferase catalytic subunit 0.59 A4249_RS06460 endopeptidase La — —
Lysobacter sp. OAE881 0.45 ABIE51_RS16015 aspartate carbamoyltransferase catalytic subunit 0.63 ABIE51_RS14145 endopeptidase La low > 62
Rhodopseudomonas palustris CGA009 0.45 TX73_016120 aspartate carbamoyltransferase catalytic subunit 0.59 TX73_015345 endopeptidase La — —
Rhodanobacter denitrificans FW104-10B01 0.44 LRK54_RS04220 aspartate carbamoyltransferase catalytic subunit 0.61 LRK54_RS16735 endopeptidase La — —
Rhodanobacter denitrificans MT42 0.44 LRK55_RS03990 aspartate carbamoyltransferase catalytic subunit 0.61 LRK55_RS16460 endopeptidase La — —
Rhodanobacter sp. FW510-T8 0.44 OKGIIK_11095 pyrB aspartate carbamoyltransferase catalytic subunit 0.60 OKGIIK_08030 lon endopeptidase La — —
Dinoroseobacter shibae DFL-12 0.44 Dshi_3091 aspartate carbamoyltransferase (RefSeq) 0.56 Dshi_1777 ATP-dependent protease La (RefSeq) low > 64
Dyella japonica UNC79MFTsu3.2 0.44 ABZR86_RS10390 aspartate carbamoyltransferase catalytic subunit 0.62 ABZR86_RS07320 endopeptidase La — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.43 Echvi_4661 aspartate carbamoyltransferase 0.40 Echvi_4670 ATP-dependent protease La — —
Caulobacter crescentus NA1000 Δfur 0.43 CCNA_02525 aspartate carbamoyltransferase 0.60 CCNA_02037 ATP-dependent endopeptidase Lon — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.43 ABZR88_RS03460 aspartate carbamoyltransferase catalytic subunit 0.42 ABZR88_RS15670 endopeptidase La — —
Phaeobacter inhibens DSM 17395 0.43 PGA1_c03060 aspartate carbamoyltransferase PyrB 0.58 PGA1_c20540 ATP-dependent protease La — —
Caulobacter crescentus NA1000 0.43 CCNA_02525 aspartate carbamoyltransferase 0.60 CCNA_02037 ATP-dependent endopeptidase Lon low > 66
Desulfovibrio vulgaris Hildenborough JW710 0.43 DVU2901 pyrB aspartate carbamoyltransferase (TIGR) 0.51 DVU1337 lon ATP-dependent protease La (TIGR) — —
Pedobacter sp. GW460-11-11-14-LB5 0.43 CA265_RS14660 aspartate carbamoyltransferase 0.40 CA265_RS14555 endopeptidase La — —
Sphingomonas koreensis DSMZ 15582 0.42 Ga0059261_0076 aspartate carbamoyltransferase (EC 2.1.3.2) 0.58 Ga0059261_0102 endopeptidase La — —
Desulfovibrio vulgaris Miyazaki F 0.41 DvMF_1425 pyrB aspartate carbamoyltransferase catalytic subunit (RefSeq) 0.51 DvMF_0112 ATP-dependent protease La (RefSeq) low > 51
Pontibacter actiniarum KMM 6156, DSM 19842 0.41 CA264_20465 aspartate carbamoyltransferase 0.41 CA264_00045 endopeptidase La low > 74
Fusobacterium nucleatum SB010 0.27 HUW76_08765 aspartate carbamoyltransferase catalytic subunit 0.41 HUW76_01065 endopeptidase La low > 35
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.22 GFF930 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.65 GFF4355 ATP-dependent protease La (EC 3.4.21.53) Type I low > 78
Escherichia coli ECOR27 0.21 NOLOHH_04125 pyrB aspartate carbamoyltransferase 0.65 NOLOHH_01255 lon_P403L Lon protease low > 57
Bacteroides ovatus ATCC 8483 0.21 BACOVA_02450 aspartate carbamoyltransferase 0.40 BACOVA_02571 endopeptidase La — —
Escherichia coli ECRC98 0.21 JDDGAC_15505 pyrB aspartate carbamoyltransferase 0.65 JDDGAC_11975 Lon protease — —
Escherichia coli BW25113 0.21 b4245 pyrB aspartate carbamoyltransferase catalytic subunit (NCBI) 0.65 b0439 lon DNA-binding ATP-dependent protease La (NCBI) low > 76
Escherichia coli ECRC102 0.21 NIAGMN_09715 pyrB aspartate carbamoyltransferase 0.65 NIAGMN_06375 Lon protease — —
Escherichia fergusonii Becca 0.21 EFB2_04288 Aspartate carbamoyltransferase catalytic subunit 0.65 EFB2_03618 Lon protease low > 86
Escherichia coli Nissle 1917 0.21 ECOLIN_RS24625 aspartate carbamoyltransferase 0.65 ECOLIN_RS02635 endopeptidase La low > 52
Escherichia coli HS(pFamp)R (ATCC 700891) 0.21 OHPLBJKB_03789 Aspartate carbamoyltransferase catalytic subunit 0.65 OHPLBJKB_03234 Lon protease low > 73
Escherichia coli ECRC101 0.21 MCAODC_02370 pyrB aspartate carbamoyltransferase 0.65 MCAODC_27545 Lon protease — —
Escherichia coli ECOR38 0.21 HEPCGN_10060 pyrB aspartate carbamoyltransferase 0.65 HEPCGN_06935 lon_P403L Lon protease low > 85
Escherichia coli ECRC101 0.21 OKFHMN_11865 pyrB aspartate carbamoyltransferase 0.65 OKFHMN_08320 Lon protease — —
Enterobacter asburiae PDN3 0.21 EX28DRAFT_3446 aspartate carbamoyltransferase (EC 2.1.3.2) 0.65 EX28DRAFT_2531 endopeptidase La — —
Escherichia coli ECRC62 0.21 BNILDI_07385 pyrB aspartate carbamoyltransferase 0.65 BNILDI_22670 lon_P403L Lon protease — —
Escherichia coli BL21 0.21 ECD_04113 aspartate carbamoyltransferase, catalytic subunit 0.65 ECD_00391 DNA-binding ATP-dependent protease La low > 60
Escherichia coli ECRC99 0.21 KEDOAH_16290 pyrB aspartate carbamoyltransferase 0.65 KEDOAH_19645 Lon protease — —
Vibrio cholerae E7946 ATCC 55056 0.21 CSW01_12725 aspartate carbamoyltransferase 0.65 CSW01_09605 endopeptidase La low > 62
Parabacteroides merdae CL09T00C40 0.20 HMPREF1078_RS01350 aspartate carbamoyltransferase 0.39 HMPREF1078_RS16185 endopeptidase La — —
Pantoea sp. MT58 0.20 IAI47_16860 aspartate carbamoyltransferase 0.65 IAI47_14645 endopeptidase La — —
Enterobacter sp. TBS_079 0.20 MPMX20_00544 Aspartate carbamoyltransferase catalytic subunit 0.65 MPMX20_01030 Lon protease 0.68 66
Phocaeicola vulgatus CL09T03C04 0.20 HMPREF1058_RS03820 aspartate carbamoyltransferase 0.39 HMPREF1058_RS01210 endopeptidase La — —
Kangiella aquimarina DSM 16071 0.20 B158DRAFT_0021 aspartate carbamoyltransferase (EC 2.1.3.2) 0.65 B158DRAFT_1038 ATP-dependent protease La — —
Dickeya dianthicola 67-19 0.20 HGI48_RS01900 aspartate carbamoyltransferase 0.66 HGI48_RS05695 endopeptidase La low > 71
Dickeya dianthicola ME23 0.20 DZA65_RS01970 aspartate carbamoyltransferase 0.66 DZA65_RS06020 endopeptidase La low > 75
Bacteroides stercoris CC31F 0.20 HMPREF1181_RS14990 aspartate carbamoyltransferase 0.41 HMPREF1181_RS14340 endopeptidase La low > 56
Dickeya dadantii 3937 0.20 DDA3937_RS01925 aspartate carbamoyltransferase 0.66 DDA3937_RS05650 endopeptidase La low > 74
Klebsiella michiganensis M5al 0.20 BWI76_RS02995 aspartate carbamoyltransferase 0.66 BWI76_RS06535 endopeptidase La low > 92
Serratia liquefaciens MT49 0.20 IAI46_02275 aspartate carbamoyltransferase 0.65 IAI46_05020 endopeptidase La 0.55 86
Phocaeicola dorei CL03T12C01 0.20 ABI39_RS17400 aspartate carbamoyltransferase 0.39 ABI39_RS16520 endopeptidase La — —
Erwinia tracheiphila SCR3 0.20 LU632_RS20950 pyrB aspartate carbamoyltransferase 0.66 LU632_RS18335 lon endopeptidase La — —
Rahnella sp. WP5 0.19 EX31_RS12785 aspartate carbamoyltransferase 0.65 EX31_RS22255 endopeptidase La low > 89
Pectobacterium carotovorum WPP14 0.19 HER17_RS19510 aspartate carbamoyltransferase 0.66 HER17_RS15840 endopeptidase La — —
Shewanella oneidensis MR-1 0.19 SO1301 pyrB aspartate carbamoyltransferase (NCBI ptt file) 0.66 SO1796 lon ATP-dependent protease La (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.19 MIT1002_00423 Aspartate carbamoyltransferase catalytic chain 0.65 MIT1002_02757 Lon protease low > 70
Shewanella sp. ANA-3 0.19 Shewana3_3070 aspartate carbamoyltransferase (RefSeq) 0.65 Shewana3_2659 Lon-A peptidase (RefSeq) — —
Shewanella loihica PV-4 0.18 Shew_1013 aspartate carbamoyltransferase (RefSeq) 0.66 Shew_2506 ATP-dependent protease La (RefSeq) — —
Shewanella amazonensis SB2B 0.18 Sama_0840 aspartate carbamoyltransferase (RefSeq) 0.65 Sama_1226 endopeptidase La (RefSeq) low > 62

Not shown: 6 genomes with orthologs for GFF651 only; 1 genomes with orthologs for GFF4044 only