Conservation of cofitness between GFF4227 and GFF147 in Sphingobium sp. HT1-2

101 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingobium sp. HT1-2 1.0 GFF4227 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) 1.0 GFF147 ATP-dependent hsl protease ATP-binding subunit HslU 0.86 10
Agrobacterium fabrum C58 0.71 Atu4617 dTDP-D-glucose-4,6-dehydratase 0.62 Atu0045 heat shock chaperone low > 89
Rhizobium sp. OAE497 0.70 ABIE40_RS08670 dTDP-glucose 4,6-dehydratase 0.61 ABIE40_RS19475 ATP-dependent protease ATPase subunit HslU low > 107
Caulobacter crescentus NA1000 0.65 CCNA_03744 dTDP-glucose 4,6-dehydratase 0.55 CCNA_03844 ATP-dependent endopeptidase hsl ATP-binding subunit HslU low > 66
Caulobacter crescentus NA1000 Δfur 0.65 CCNA_03744 dTDP-glucose 4,6-dehydratase 0.55 CCNA_03844 ATP-dependent endopeptidase hsl ATP-binding subunit HslU low > 67
Xanthobacter sp. DMC5 0.63 GFF1115 dTDP-glucose 4,6-dehydratase 2 0.60 GFF2410 ATP-dependent protease ATPase subunit HslU
Klebsiella pneumoniae MKP103 0.60 KDGMDA_26190 dTDP-glucose 4 6-dehydratase 0.52 KDGMDA_09260 HslU--HslV peptidase ATPase subunit low > 95
Escherichia coli HS(pFamp)R (ATCC 700891) 0.60 OHPLBJKB_01660 dTDP-glucose 4,6-dehydratase 2 0.52 OHPLBJKB_04120 ATP-dependent protease ATPase subunit HslU low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.60 GFF2885 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) 0.52 GFF2313 ATP-dependent hsl protease ATP-binding subunit HslU low > 78
Rahnella sp. WP5 0.60 EX31_RS11515 dTDP-glucose 4,6-dehydratase 0.52 EX31_RS14245 HslU--HslV peptidase ATPase subunit
Dickeya dadantii 3937 0.60 DDA3937_RS06735 dTDP-glucose 4,6-dehydratase 0.52 DDA3937_RS00915 HslU--HslV peptidase ATPase subunit low > 74
Dickeya dianthicola 67-19 0.59 HGI48_RS06755 dTDP-glucose 4,6-dehydratase 0.53 HGI48_RS20460 HslU--HslV peptidase ATPase subunit low > 71
Rhodospirillum rubrum S1H 0.59 Rru_B0050 dTDP-glucose 4,6-dehydratase (NCBI) 0.61 Rru_A3600 Heat shock protein HslU (NCBI) low > 58
Dickeya dianthicola ME23 0.59 DZA65_RS07110 dTDP-glucose 4,6-dehydratase 0.52 DZA65_RS21505 HslU--HslV peptidase ATPase subunit low > 75
Pseudomonas fluorescens FW300-N2C3 0.59 AO356_10040 dTDP-glucose 4,6-dehydratase 0.52 AO356_09460 ATP-dependent protease ATP-binding subunit HslU
Pseudomonas fluorescens FW300-N2E2 0.59 Pf6N2E2_3878 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) 0.51 Pf6N2E2_3770 ATP-dependent hsl protease ATP-binding subunit HslU
Pseudomonas sp. RS175 0.59 PFR28_04894 dTDP-glucose 4,6-dehydratase 2 0.52 PFR28_04998 ATP-dependent protease ATPase subunit HslU
Pseudomonas fluorescens FW300-N2E3 0.59 AO353_11885 dTDP-glucose 4,6-dehydratase 0.52 AO353_12425 ATP-dependent protease ATP-binding subunit HslU
Shewanella sp. ANA-3 0.59 Shewana3_1379 dTDP-glucose 4,6 dehydratase (RefSeq) 0.55 Shewana3_3700 hslU ATP-dependent protease ATP-binding subunit HslU (RefSeq)
Escherichia coli BL21 0.58 ECD_03666 dTDP-glucose 4,6-dehydratase 0.52 ECD_03816 molecular chaperone and ATPase component of HslUV protease low > 61
Escherichia coli BW25113 0.58 b3788 rffG dTDP-glucose 4,6-dehydratase (NCBI) 0.52 b3931 hslU ATP-dependent protease ATP-binding subunit (NCBI) low > 76
Pectobacterium carotovorum WPP14 0.58 HER17_RS01165 dTDP-glucose 4,6-dehydratase 0.52 HER17_RS00850 HslU--HslV peptidase ATPase subunit
Azospirillum sp. SherDot2 0.58 MPMX19_06725 dTDP-glucose 4,6-dehydratase 2 0.61 MPMX19_02549 ATP-dependent protease ATPase subunit HslU
Escherichia coli ECOR27 0.58 NOLOHH_06695 rffG dTDP-glucose 4,6-dehydratase 0.52 NOLOHH_05885 hslU HslU--HslV peptidase ATPase subunit low > 76
Escherichia coli ECRC62 0.58 BNILDI_04830 rffG dTDP-glucose 4,6-dehydratase 0.53 BNILDI_05645 hslU HslU--HslV peptidase ATPase subunit low > 75
Pseudomonas segetis P6 0.58 ACVTMO_RS14265 rfbB dTDP-glucose 4,6-dehydratase 0.52 ACVTMO_RS21070 hslU ATP-dependent protease ATPase subunit HslU
Escherichia fergusonii Becca 0.58 EFB2_04851 dTDP-glucose 4,6-dehydratase 2 0.53 EFB2_04687 ATP-dependent protease ATPase subunit HslU low > 86
Pseudomonas sp. SVBP6 0.58 COO64_RS00570 rfbB dTDP-glucose 4,6-dehydratase 0.52 COO64_RS13560 hslU ATP-dependent protease ATPase subunit HslU
Shewanella loihica PV-4 0.58 Shew_1401 dTDP-glucose 4,6 dehydratase (RefSeq) 0.54 Shew_0374 hslU ATP-dependent protease ATP-binding subunit (RefSeq) low > 60
Pseudomonas simiae WCS417 0.58 PS417_01330 dTDP-glucose 4,6-dehydratase 0.50 PS417_01915 ATP-dependent protease ATP-binding subunit HslU
Pseudomonas fluorescens SBW25-INTG 0.58 PFLU_RS01425 dTDP-glucose 4,6-dehydratase 0.51 PFLU_RS01960 ATP-dependent protease ATPase subunit HslU
Alteromonas macleodii MIT1002 0.58 MIT1002_03557 dTDP-glucose 4,6-dehydratase 0.50 MIT1002_03659 Unfoldase HslU
Pantoea sp. MT58 0.58 IAI47_18500 dTDP-glucose 4,6-dehydratase 0.52 IAI47_00845 HslU--HslV peptidase ATPase subunit
Escherichia coli Nissle 1917 0.58 ECOLIN_RS21745 dTDP-glucose 4,6-dehydratase 0.53 ECOLIN_RS22635 HslU--HslV peptidase ATPase subunit
Pseudomonas fluorescens SBW25 0.58 PFLU_RS01425 dTDP-glucose 4,6-dehydratase 0.51 PFLU_RS01960 ATP-dependent protease ATPase subunit HslU
Pseudomonas syringae pv. syringae B728a ΔmexB 0.58 Psyr_4935 dTDP-glucose 4,6-dehydratase 0.52 Psyr_0394 Heat shock protein HslU low > 86
Pantoea agglomerans CFBP13505 P0401 0.58 PagCFBP13505_RS15495 dTDP-glucose 4,6-dehydratase 0.52 PagCFBP13505_RS18495 HslU--HslV peptidase ATPase subunit low > 74
Serratia liquefaciens MT49 0.58 IAI46_00610 dTDP-glucose 4,6-dehydratase 0.52 IAI46_24575 HslU--HslV peptidase ATPase subunit 0.34 19
Pseudomonas syringae pv. syringae B728a 0.58 Psyr_4935 dTDP-glucose 4,6-dehydratase 0.52 Psyr_0394 Heat shock protein HslU low > 86
Escherichia coli ECRC102 0.58 NIAGMN_12315 rffG dTDP-glucose 4,6-dehydratase 0.52 NIAGMN_11495 hslU HslU--HslV peptidase ATPase subunit low > 80
Escherichia coli ECRC100 0.58 OKFHMN_14560 rffG dTDP-glucose 4,6-dehydratase 0.52 OKFHMN_13740 hslU HslU--HslV peptidase ATPase subunit low > 79
Escherichia coli ECRC101 0.58 MCAODC_05065 rffG dTDP-glucose 4,6-dehydratase 0.52 MCAODC_04240 hslU HslU--HslV peptidase ATPase subunit low > 87
Escherichia coli ECOR38 0.58 HEPCGN_13270 rffG dTDP-glucose 4,6-dehydratase 0.53 HEPCGN_12385 hslU HslU--HslV peptidase ATPase subunit low > 88
Escherichia coli ECRC99 0.58 KEDOAH_13590 rffG dTDP-glucose 4,6-dehydratase 0.52 KEDOAH_14420 hslU HslU--HslV peptidase ATPase subunit
Pseudomonas orientalis W4I3 0.58 QF045_RS04450 dTDP-glucose 4,6-dehydratase 0.50 QF045_RS04975 ATP-dependent protease ATPase subunit HslU
Pseudomonas stutzeri RCH2 0.58 Psest_4262 dTDP-glucose 4,6-dehydratase 0.51 Psest_3937 ATP-dependent protease HslVU, ATPase subunit
Escherichia coli ECRC98 0.58 JDDGAC_18185 rffG dTDP-glucose 4,6-dehydratase 0.52 JDDGAC_17365 hslU HslU--HslV peptidase ATPase subunit low > 87
Enterobacter asburiae PDN3 0.58 EX28DRAFT_0515 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) 0.53 EX28DRAFT_4404 ATP-dependent protease HslVU, ATPase subunit
Marinobacter adhaerens HP15 0.58 HP15_p187g47 dTDP-glucose 4,6-dehydratase 0.52 HP15_465 heat shock protein HslVU, ATPase subunit HslU low > 73
Erwinia amylovora T8 0.57 OLJFJH_12090 dTDP-glucose 4 6-dehydratase 0.50 OLJFJH_06060 HslU--HslV peptidase ATPase subunit
Pseudomonas fluorescens FW300-N1B4 0.57 Pf1N1B4_5939 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) 0.52 Pf1N1B4_1553 ATP-dependent hsl protease ATP-binding subunit HslU
Castellaniella sp019104865 MT123 0.57 ABCV34_RS02410 dTDP-glucose 4,6-dehydratase 0.54 ABCV34_RS13410 ATP-dependent protease ATPase subunit HslU
Pseudomonas lactucae CFBP13502 0.57 GEMAOFIL_02615 dTDP-glucose 4,6-dehydratase 2 0.50 GEMAOFIL_00616 ATP-dependent protease ATPase subunit HslU low > 96
Bosea sp. OAE506 0.57 ABIE41_RS02850 dTDP-glucose 4,6-dehydratase 0.63 ABIE41_RS04445 ATP-dependent protease ATPase subunit HslU low > 77
Pseudomonas sp. S08-1 0.57 OH686_14380 dTDP-glucose 4,6-dehydratase 0.51 OH686_10100 ATP-dependent protease HslVU, ATPase subunit
Shewanella oneidensis MR-1 0.56 SO3188 rfbB dTDP-glucose 4,6-dehydratase (NCBI ptt file) 0.56 SO4163 hslU heat shock protein HslVU, ATPase subunit HslU (NCBI ptt file) low > 76
Erwinia tracheiphila HP pepo 2.2 0.56 IJEDHG_18980 rfbB dTDP-glucose 4 6-dehydratase 0.52 IJEDHG_12985 hslU HslU--HslV peptidase ATPase subunit
Erwinia tracheiphila SCR3 0.56 LU632_RS08850 rfbB dTDP-glucose 4,6-dehydratase 0.52 LU632_RS19675 hslU HslU--HslV peptidase ATPase subunit low > 73
Pseudomonas sp. DMC3 0.56 GFF4669 dTDP-glucose 4,6-dehydratase 0.51 GFF3085 ATP-dependent protease ATPase subunit HslU
Enterobacter sp. TBS_079 0.56 MPMX20_03013 dTDP-glucose 4,6-dehydratase 0.53 MPMX20_04538 ATP-dependent protease ATPase subunit HslU low > 85
Klebsiella michiganensis M5al 0.55 BWI76_RS19065 dTDP-glucose 4,6-dehydratase 0.52 BWI76_RS00750 ATP-dependent protease ATP-binding subunit HslU low > 92
Sphingomonas koreensis DSMZ 15582 0.54 Ga0059261_3099 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) 0.79 Ga0059261_3339 ATP-dependent protease HslVU, ATPase subunit low > 68
Paraburkholderia graminis OAS925 0.54 ABIE53_001137 dTDP-glucose 4,6-dehydratase 0.54 ABIE53_000421 ATP-dependent HslUV protease ATP-binding subunit HslU
Azospirillum brasilense Sp245 0.54 AZOBR_RS33415 dTDP-glucose 4 6-dehydratase 0.61 AZOBR_RS01650 ATP-dependent protease low > 97
Paraburkholderia bryophila 376MFSha3.1 0.54 H281DRAFT_04822 dTDP-glucose 4,6-dehydratase 0.54 H281DRAFT_02207 ATP-dependent HslUV protease ATP-binding subunit HslU
Pseudomonas fluorescens GW456-L13 0.53 PfGW456L13_2200 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) 0.50 PfGW456L13_290 ATP-dependent hsl protease ATP-binding subunit HslU
Dinoroseobacter shibae DFL-12 0.53 Dshi_4115 dTDP-glucose 4,6-dehydratase (RefSeq) 0.62 Dshi_3441 heat shock protein HslVU, ATPase subunit HslU (RefSeq) low > 64
Pseudomonas putida KT2440 0.53 PP_1785 dTDP-glucose 4,6-dehydratase 2 0.52 PP_5001 protease HslVU, ATPase component
Burkholderia phytofirmans PsJN 0.53 BPHYT_RS04265 dTDP-glucose 4,6-dehydratase 0.54 BPHYT_RS01630 ATP-dependent protease ATPase subunit HslU
Ralstonia solanacearum PSI07 0.53 RPSI07_RS20615 dTDP-glucose 4,6-dehydratase 0.55 RPSI07_RS23740 ATP-dependent protease ATPase subunit HslU
Ralstonia sp. UNC404CL21Col 0.53 ABZR87_RS08645 dTDP-glucose 4,6-dehydratase 0.56 ABZR87_RS05120 ATP-dependent protease ATPase subunit HslU 0.28 42
Ralstonia solanacearum IBSBF1503 0.53 RALBFv3_RS12645 dTDP-glucose 4,6-dehydratase 0.55 RALBFv3_RS09625 ATP-dependent protease ATPase subunit HslU
Ralstonia solanacearum UW163 0.53 UW163_RS00920 dTDP-glucose 4,6-dehydratase 0.55 UW163_RS03955 ATP-dependent protease ATPase subunit HslU
Ralstonia solanacearum GMI1000 0.53 RS_RS03430 dTDP-glucose 4,6-dehydratase 0.55 RS_RS00210 HslU--HslV peptidase ATPase subunit
Phaeobacter inhibens DSM 17395 0.53 PGA1_65p00240 dTDP-glucose 4,6-dehydratase RffG 0.62 PGA1_c35240 ATP-dependent hsl protease ATP-binding subunit HslU low > 62
Rhodanobacter sp000427505 FW510-R12 0.52 LRK53_RS04365 dTDP-glucose 4,6-dehydratase 0.52 LRK53_RS02305 ATP-dependent protease ATPase subunit HslU
Magnetospirillum magneticum AMB-1 0.52 AMB_RS00295 dTDP-glucose 4,6-dehydratase 0.58 AMB_RS22955 ATP-dependent protease ATPase subunit HslU
Sinorhizobium meliloti 1021 0.52 SM_b21326 dTDP-D-glucose 4,6-dehydratase 0.62 SMc02577 ATP-dependent protease ATP-binding subunit HslU low > 103
Paraburkholderia sabiae LMG 24235 0.52 QEN71_RS25755 dTDP-glucose 4,6-dehydratase 0.53 QEN71_RS00330 ATP-dependent protease ATPase subunit HslU
Rhodanobacter sp. FW510-T8 0.52 OKGIIK_01175 rfbB dTDP-glucose 4,6-dehydratase 0.50 OKGIIK_15315 hslU ATP-dependent protease ATPase subunit HslU low > 53
Rhodanobacter denitrificans FW104-10B01 0.51 LRK54_RS05665 dTDP-glucose 4,6-dehydratase 0.51 LRK54_RS08520 ATP-dependent protease ATPase subunit HslU low > 59
Shewanella amazonensis SB2B 0.51 Sama_2242 dTDP-glucose 4,6-dehydratase (RefSeq) 0.54 Sama_0440 hslU ATP-dependent protease ATP-binding subunit HslU (RefSeq)
Xanthomonas campestris pv. campestris strain 8004 0.51 Xcc-8004.4486.1 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) 0.54 Xcc-8004.852.1 ATP-dependent hsl protease ATP-binding subunit HslU low > 74
Cupriavidus basilensis FW507-4G11 0.51 RR42_RS15840 spore coat protein 0.57 RR42_RS01065 ATP-dependent protease ATP-binding subunit HslU
Pseudomonas sp. BP01 0.50 JOY50_RS16040 rfbB dTDP-glucose 4,6-dehydratase 0.52 JOY50_RS09685 hslU ATP-dependent protease ATPase subunit HslU
Variovorax sp. OAS795 0.50 ABID97_RS05660 dTDP-glucose 4,6-dehydratase 0.56 ABID97_RS06185 ATP-dependent protease ATPase subunit HslU
Dyella japonica UNC79MFTsu3.2 0.50 ABZR86_RS18735 dTDP-glucose 4,6-dehydratase 0.52 ABZR86_RS15040 ATP-dependent protease ATPase subunit HslU low > 74
Variovorax sp. SCN45 0.50 GFF6882 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) 0.56 GFF4483 ATP-dependent hsl protease ATP-binding subunit HslU
Acidovorax sp. GW101-3H11 0.49 Ac3H11_1880 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) 0.56 Ac3H11_2005 ATP-dependent hsl protease ATP-binding subunit HslU
Pseudomonas aeruginosa MRSN321 0.49 DY961_RS11655 rfbB;go_function=dTDP-glucose dTDP-glucose 4 6-dehydratase 0.50 DY961_RS11090 hslU;go_function=ATP ATP-dependent protease ATPase subunit HslU
Pseudomonas aeruginosa PUPa3 0.49 DQ20_RS50445 rfbB;go_function=dTDP-glucose dTDP-glucose 4 6-dehydratase 0.50 DQ20_RS50985 hslU;go_function=ATP ATP-dependent protease ATPase subunit HslU
Pseudomonas aeruginosa PA14 0.49 IKLFDK_27680 dTDP-glucose 4 6-dehydratase 0.50 IKLFDK_28255 ATP-dependent protease ATPase subunit HslU
Dechlorosoma suillum PS 0.49 Dsui_1948 dTDP-glucose 4,6-dehydratase 0.54 Dsui_0580 ATP-dependent protease HslVU, ATPase subunit
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF1837 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) 0.54 GFF553 ATP-dependent hsl protease ATP-binding subunit HslU
Lysobacter sp. OAE881 0.49 ABIE51_RS15620 dTDP-glucose 4,6-dehydratase 0.54 ABIE51_RS03045 ATP-dependent protease ATPase subunit HslU low > 62
Herbaspirillum seropedicae SmR1 0.48 HSERO_RS22050 spore coat protein 0.51 HSERO_RS00915 ATP-dependent protease
Pontibacter actiniarum KMM 6156, DSM 19842 0.47 CA264_17910 dTDP-glucose 4,6-dehydratase 0.49 CA264_00055 ATP-dependent protease ATP-binding subunit HslU
Echinicola vietnamensis KMM 6221, DSM 17526 0.47 Echvi_2329 dTDP-glucose 4,6-dehydratase 0.47 Echvi_4669 ATP-dependent protease HslVU, ATPase subunit
Desulfovibrio vulgaris Miyazaki F 0.40 DvMF_0141 dTDP-glucose 4,6-dehydratase (RefSeq) 0.47 DvMF_0307 hslU ATP-dependent protease ATP-binding subunit HslU (RefSeq)
Desulfovibrio vulgaris Hildenborough JW710 0.40 DVU1364 rfbB dTDP-glucose 4,6-dehydratase (TIGR) 0.50 DVU1467 hslU heat shock protein HslVU, ATPase subunit HslU (TIGR)
Rhodopseudomonas palustris CGA009 0.19 TX73_020345 GDP-mannose 4,6-dehydratase 0.58 TX73_001590 ATP-dependent protease ATPase subunit HslU low > 86
Vibrio cholerae E7946 ATCC 55056 0.11 CSW01_01280 GDP-mannose 4,6-dehydratase 0.52 CSW01_13510 HslU--HslV peptidase ATPase subunit low > 62

Not shown: 17 genomes with orthologs for GFF4227 only; 2 genomes with orthologs for GFF147 only