| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas stutzeri RCH2 | 1.0 | Psest_0276 | | putative oxygen-independent coproporphyrinogen III oxidase | 1.0 | Psest_1506 | | queuosine biosynthesis protein QueC | 0.27 | 4 |
| Pseudomonas sp. S08-1 | 0.80 | OH686_11020 | | Oxygen-independent coproporphyrinogen-III oxidase-like protein YggW | 0.85 | OH686_19180 | | queuosine biosynthesis protein QueC | low | > 80 |
| Pseudomonas fluorescens FW300-N2E3 | 0.79 | AO353_08200 | | coproporphyrinogen III oxidase | 0.88 | AO353_03535 | | 7-cyano-7-deazaguanine synthase | low | > 101 |
| Pseudomonas fluorescens FW300-N1B4 | 0.78 | Pf1N1B4_2334 | | Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB | 0.87 | Pf1N1B4_628 | | Queuosine Biosynthesis QueC ATPase | low | > 87 |
| Pseudomonas fluorescens FW300-N2E2 | 0.78 | Pf6N2E2_4593 | | Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB | 0.89 | Pf6N2E2_5546 | | Queuosine Biosynthesis QueC ATPase | low | > 103 |
| Pseudomonas fluorescens GW456-L13 | 0.78 | PfGW456L13_1003 | | Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB | 0.85 | PfGW456L13_1862 | | Queuosine Biosynthesis QueC ATPase | 0.48 | 11 |
| Pseudomonas fluorescens SBW25 | 0.77 | PFLU_RS28405 | | radical SAM family heme chaperone HemW | 0.86 | PFLU_RS24040 | | 7-cyano-7-deazaguanine synthase QueC | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.77 | PFLU_RS28405 | | radical SAM family heme chaperone HemW | 0.86 | PFLU_RS24040 | | 7-cyano-7-deazaguanine synthase QueC | 0.40 | 4 |
| Pseudomonas fluorescens FW300-N2C3 | 0.77 | AO356_13390 | | coproporphyrinogen III oxidase | 0.88 | AO356_18070 | | 7-cyano-7-deazaguanine synthase | low | > 104 |
| Pseudomonas simiae WCS417 | 0.77 | PS417_26760 | | oxidase | 0.87 | PS417_22400 | | 7-cyano-7-deazaguanine synthase | low | > 88 |
| Pseudomonas sp. RS175 | 0.75 | PFR28_04249 | | Heme chaperone HemW | 0.88 | PFR28_03403 | | 7-cyano-7-deazaguanine synthase | low | > 88 |
| Pseudomonas putida KT2440 | 0.75 | PP_5101 | | coproporphyrinogen/heterocyclic compound oxidase (aerobic) | 0.87 | PP_1226 | | pre-queuosine 0 synthase | low | > 96 |
| Pseudomonas syringae pv. syringae B728a | 0.75 | Psyr_0471 | | coproporphyrinogen III oxidase, anaerobic | 0.85 | Psyr_1419 | | preQ(0) biosynthesis protein QueC | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.75 | Psyr_0471 | | coproporphyrinogen III oxidase, anaerobic | 0.85 | Psyr_1419 | | preQ(0) biosynthesis protein QueC | low | > 86 |
| Shewanella oneidensis MR-1 | 0.56 | SO3359 | | oxygen-independent coproporphyrinogen III oxidase, putative (NCBI ptt file) | 0.29 | SO2503 | exsB | exsB protein (NCBI ptt file) | low | > 76 |
| Serratia liquefaciens MT49 | 0.55 | IAI46_21435 | | radical SAM family heme chaperone HemW | 0.31 | IAI46_05045 | | 7-cyano-7-deazaguanine synthase QueC | low | > 86 |
| Shewanella sp. ANA-3 | 0.55 | Shewana3_1188 | | putative oxygen-independent coproporphyrinogen III oxidase (RefSeq) | 0.29 | Shewana3_2164 | | queuosine biosynthesis protein QueC (RefSeq) | low | > 73 |
| Enterobacter asburiae PDN3 | 0.54 | EX28DRAFT_2993 | | putative oxygen-independent coproporphyrinogen III oxidase | 0.33 | EX28DRAFT_2526 | | queuosine biosynthesis protein QueC | low | > 76 |
| Kangiella aquimarina DSM 16071 | 0.54 | B158DRAFT_0201 | | coproporphyrinogen III oxidase, anaerobic (EC 1.3.99.22) | 0.69 | B158DRAFT_1146 | | preQ(0) biosynthesis protein QueC | low | > 40 |
| Escherichia coli Nissle 1917 | 0.54 | ECOLIN_RS16435 | | radical SAM family heme chaperone HemW | 0.33 | ECOLIN_RS02660 | | 7-cyano-7-deazaguanine synthase QueC | — | — |
| Enterobacter sp. TBS_079 | 0.54 | MPMX20_03813 | | Heme chaperone HemW | 0.33 | MPMX20_01035 | | 7-cyano-7-deazaguanine synthase | low | > 85 |
| Shewanella amazonensis SB2B | 0.54 | Sama_2483 | | oxygen-independent coproporphyrinogen III oxidase, putative (RefSeq) | 0.31 | Sama_1826 | | ExsB protein (RefSeq) | low | > 62 |
| Escherichia coli ECOR38 | 0.54 | HEPCGN_18540 | hemW | radical SAM family heme chaperone HemW | 0.33 | HEPCGN_06910 | queC | 7-cyano-7-deazaguanine synthase QueC | low | > 85 |
| Escherichia coli BL21 | 0.54 | ECD_02785 | | HemN family putative oxidoreductase | 0.32 | ECD_00396 | | 7-cyano-7-deazaguanine (preQ0) synthase; queuosine biosynthesis | low | > 60 |
| Escherichia fergusonii Becca | 0.54 | EFB2_00947 | | Heme chaperone HemW | 0.33 | EFB2_03613 | | 7-cyano-7-deazaguanine synthase | low | > 86 |
| Escherichia coli ECRC62 | 0.53 | BNILDI_09685 | hemW | radical SAM family heme chaperone HemW | 0.33 | BNILDI_22645 | queC | 7-cyano-7-deazaguanine synthase QueC | — | — |
| Escherichia coli ECRC101 | 0.53 | MCAODC_09755 | hemW | radical SAM family heme chaperone HemW | 0.32 | MCAODC_27520 | queC | 7-cyano-7-deazaguanine synthase QueC | — | — |
| Escherichia coli ECRC101 | 0.53 | OKFHMN_19235 | hemW | radical SAM family heme chaperone HemW | 0.32 | OKFHMN_08295 | queC | 7-cyano-7-deazaguanine synthase QueC | — | — |
| Escherichia coli ECRC102 | 0.53 | NIAGMN_17000 | hemW | radical SAM family heme chaperone HemW | 0.32 | NIAGMN_06350 | queC | 7-cyano-7-deazaguanine synthase QueC | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.53 | GFF3058 | | Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB | 0.34 | GFF4360 | | Queuosine Biosynthesis QueC ATPase | low | > 78 |
| Escherichia coli ECRC98 | 0.53 | JDDGAC_22865 | hemW | radical SAM family heme chaperone HemW | 0.32 | JDDGAC_11950 | queC | 7-cyano-7-deazaguanine synthase QueC | — | — |
| Escherichia coli BW25113 | 0.53 | b2955 | yggW | coproporphyrinogen III oxidase (NCBI) | 0.33 | b0444 | ybaX | predicted aluminum resistance protein (NCBI) | low | > 76 |
| Escherichia coli ECRC99 | 0.53 | KEDOAH_08905 | hemW | radical SAM family heme chaperone HemW | 0.32 | KEDOAH_19670 | queC | 7-cyano-7-deazaguanine synthase QueC | — | — |
| Escherichia coli ECOR27 | 0.53 | NOLOHH_11105 | hemW | radical SAM family heme chaperone HemW | 0.33 | NOLOHH_01230 | queC | 7-cyano-7-deazaguanine synthase QueC | low | > 57 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.53 | OHPLBJKB_00761 | | Oxygen-independent coproporphyrinogen-III oxidase-like protein YqeR | 0.33 | OHPLBJKB_03229 | | 7-cyano-7-deazaguanine synthase | low | > 73 |
| Vibrio cholerae E7946 ATCC 55056 | 0.53 | CSW01_02425 | | YggW family oxidoreductase | 0.31 | CSW01_06875 | | 7-cyano-7-deazaguanine synthase QueC | low | > 62 |
| Klebsiella michiganensis M5al | 0.53 | BWI76_RS24120 | | YggW family oxidoreductase | 0.33 | BWI76_RS06560 | | 7-cyano-7-deazaguanine synthase QueC | low | > 92 |
| Pectobacterium carotovorum WPP14 | 0.53 | HER17_RS03785 | | radical SAM family heme chaperone HemW | 0.32 | HER17_RS15815 | | 7-cyano-7-deazaguanine synthase QueC | low | > 75 |
| Dickeya dianthicola 67-19 | 0.53 | HGI48_RS17370 | | radical SAM family heme chaperone HemW | 0.33 | HGI48_RS05715 | | 7-cyano-7-deazaguanine synthase QueC | low | > 71 |
| Shewanella loihica PV-4 | 0.53 | Shew_1131 | | putative oxygen-independent coproporphyrinogen III oxidase (RefSeq) | 0.30 | Shew_2062 | | exsB protein (RefSeq) | — | — |
| Alteromonas macleodii MIT1002 | 0.53 | MIT1002_00939 | | Oxygen-independent coproporphyrinogen-III oxidase 1 | 0.33 | MIT1002_01263 | | 7-cyano-7-deazaguanine synthase | low | > 70 |
| Dickeya dadantii 3937 | 0.53 | DDA3937_RS17325 | | radical SAM family heme chaperone HemW | 0.32 | DDA3937_RS05670 | | 7-cyano-7-deazaguanine synthase QueC | low | > 74 |
| Rahnella sp. WP5 | 0.52 | EX31_RS02710 | | radical SAM family heme chaperone HemW | 0.32 | EX31_RS22280 | | 7-cyano-7-deazaguanine synthase QueC | low | > 89 |
| Dechlorosoma suillum PS | 0.52 | Dsui_0491 | | putative oxygen-independent coproporphyrinogen III oxidase | 0.66 | Dsui_0549 | | queuosine biosynthesis protein QueC | low | > 51 |
| Dickeya dianthicola ME23 | 0.52 | DZA65_RS18460 | | radical SAM family heme chaperone HemW | 0.32 | DZA65_RS06040 | | 7-cyano-7-deazaguanine synthase QueC | low | > 75 |
| Pantoea sp. MT58 | 0.52 | IAI47_03580 | | radical SAM family heme chaperone HemW | 0.32 | IAI47_14620 | | 7-cyano-7-deazaguanine synthase QueC | low | > 76 |
| Rhodanobacter denitrificans FW104-10B01 | 0.52 | LRK54_RS11735 | | radical SAM family heme chaperone HemW | 0.69 | LRK54_RS04855 | | 7-cyano-7-deazaguanine synthase QueC | 0.51 | 21 |
| Erwinia tracheiphila SCR3 | 0.52 | LU632_RS05445 | hemW | radical SAM family heme chaperone HemW | 0.30 | LU632_RS18310 | queC | 7-cyano-7-deazaguanine synthase QueC | low | > 74 |
| Rhodanobacter denitrificans MT42 | 0.51 | LRK55_RS11460 | | radical SAM family heme chaperone HemW | 0.69 | LRK55_RS04635 | | 7-cyano-7-deazaguanine synthase QueC | low | > 63 |
| Dyella japonica UNC79MFTsu3.2 | 0.50 | ABZR86_RS11910 | | radical SAM family heme chaperone HemW | 0.66 | ABZR86_RS10785 | | 7-cyano-7-deazaguanine synthase QueC | low | > 74 |
| Herbaspirillum seropedicae SmR1 | 0.50 | HSERO_RS10665 | | coproporphyrinogen III oxidase | 0.22 | HSERO_RS20880 | | 7-cyano-7-deazaguanine synthase | low | > 78 |
| Paraburkholderia sabiae LMG 24235 | 0.50 | QEN71_RS03635 | | radical SAM family heme chaperone HemW | 0.24 | QEN71_RS00200 | | 7-cyano-7-deazaguanine synthase QueC | low | > 153 |
| Lysobacter sp. OAE881 | 0.50 | ABIE51_RS17300 | | radical SAM family heme chaperone HemW | 0.70 | ABIE51_RS05105 | | 7-cyano-7-deazaguanine synthase QueC | 0.42 | 18 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.50 | Xcc-8004.1224.1 | | Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB | 0.68 | Xcc-8004.1450.1 | | Queuosine Biosynthesis QueC ATPase | low | > 74 |
| Rhodanobacter sp. FW510-T8 | 0.49 | OKGIIK_12160 | hemW | radical SAM family heme chaperone HemW | 0.68 | OKGIIK_01895 | queC | 7-cyano-7-deazaguanine synthase QueC | low | > 52 |
| Paraburkholderia graminis OAS925 | 0.49 | ABIE53_003236 | | putative oxygen-independent coproporphyrinogen III oxidase | 0.24 | ABIE53_000396 | | 7-cyano-7-deazaguanine synthase | 0.51 | 37 |
| Cupriavidus basilensis FW507-4G11 | 0.49 | RR42_RS04880 | | coproporphyrinogen III oxidase | 0.68 | RR42_RS15445 | | 7-cyano-7-deazaguanine synthase | low | > 128 |
| Ralstonia solanacearum PSI07 | 0.49 | RPSI07_RS13830 | | oxygen-independent coproporphyrinogen III oxidase-like protein | 0.70 | RPSI07_RS20285 | | 7-cyano-7-deazaguanine synthase QueC | low | > 81 |
| Marinobacter adhaerens HP15 | 0.49 | HP15_280 | | putative oxygen-independent coproporphyrinogen III oxidase | 0.34 | HP15_3814 | | ExsB protein | low | > 73 |
| Acinetobacter radioresistens SK82 | 0.48 | MPMX26_00308 | | Heme chaperone HemW | 0.60 | MPMX26_02175 | | 7-cyano-7-deazaguanine synthase | low | > 36 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.48 | H281DRAFT_04010 | | oxygen-independent coproporphyrinogen-3 oxidase | 0.23 | H281DRAFT_02232 | | preQ(0) biosynthesis protein QueC | 0.42 | 47 |
| Burkholderia phytofirmans PsJN | 0.48 | BPHYT_RS15335 | | coproporphyrinogen III oxidase | 0.24 | BPHYT_RS01500 | | 7-cyano-7-deazaguanine synthase | low | > 109 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.47 | GFF3256 | | Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB | 0.20 | GFF1402 | | Queuosine Biosynthesis QueC ATPase | low | > 90 |
| Ralstonia solanacearum IBSBF1503 | 0.47 | RALBFv3_RS03355 | | oxygen-independent coproporphyrinogen III oxidase-like protein | 0.69 | RALBFv3_RS12940 | | 7-cyano-7-deazaguanine synthase QueC | low | > 76 |
| Ralstonia solanacearum UW163 | 0.47 | UW163_RS10365 | | oxygen-independent coproporphyrinogen III oxidase-like protein | 0.69 | UW163_RS00625 | | 7-cyano-7-deazaguanine synthase QueC | — | — |
| Ralstonia solanacearum GMI1000 | 0.47 | RS_RS10840 | | oxygen-independent coproporphyrinogen III oxidase-like protein | 0.68 | RS_RS03715 | | 7-cyano-7-deazaguanine synthase | low | > 80 |
| Castellaniella sp019104865 MT123 | 0.46 | ABCV34_RS03525 | | radical SAM family heme chaperone HemW | 0.22 | ABCV34_RS10950 | | 7-cyano-7-deazaguanine synthase QueC | low | > 48 |
| Ralstonia sp. UNC404CL21Col | 0.46 | ABZR87_RS15265 | | radical SAM family heme chaperone HemW | 0.68 | ABZR87_RS09000 | | 7-cyano-7-deazaguanine synthase QueC | 0.54 | 37 |
| Variovorax sp. SCN45 | 0.46 | GFF2383 | | Oxygen-independent coproporphyrinogen-III oxidase-like protein YggW | 0.25 | GFF5214 | | 7-cyano-7-deazaguanine synthase (EC 6.3.4.20) | low | > 127 |
| Acidovorax sp. GW101-3H11 | 0.44 | Ac3H11_3672 | | Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB | 0.23 | Ac3H11_4838 | | Queuosine Biosynthesis QueC ATPase | low | > 79 |
| Azospirillum sp. SherDot2 | 0.32 | MPMX19_02574 | | Heme chaperone HemW | 0.61 | MPMX19_00425 | | 7-cyano-7-deazaguanine synthase | low | > 112 |
| Rhodopseudomonas palustris CGA009 | 0.31 | TX73_001700 | | radical SAM family heme chaperone HemW | 0.24 | TX73_014550 | | 7-cyano-7-deazaguanine synthase QueC | — | — |
| Rhodospirillum rubrum S1H | 0.31 | Rru_A3639 | | Putative oxygen-independent coproporphyrinogen III oxidase (NCBI) | 0.59 | Rru_A1957 | | ExsB (NCBI) | low | > 58 |
| Azospirillum brasilense Sp245 | 0.31 | AZOBR_RS02195 | | coproporphyrinogen III oxidase | 0.59 | AZOBR_RS04150 | | 7-cyano-7-deazaguanine synthase | low | > 97 |
| Sinorhizobium meliloti 1021 | 0.29 | SMc01147 | | coproporphyrinogen III oxidase | 0.29 | SM_b20940 | | hypothetical protein | low | > 103 |
| Phaeobacter inhibens DSM 17395 | 0.29 | PGA1_c35050 | | oxygen-independent coproporphyrinogen III oxidase HemN | 0.28 | PGA1_c05600 | | queuosine biosynthesis protein QueC | low | > 62 |
| Bosea sp. OAE506 | 0.29 | ABIE41_RS03305 | | radical SAM family heme chaperone HemW | 0.25 | ABIE41_RS11340 | | 7-cyano-7-deazaguanine synthase QueC | low | > 77 |
| Agrobacterium fabrum C58 | 0.29 | Atu0325 | | oxygen-independent coproporphyrinogen III oxidase | 0.28 | Atu3346 | | succinoglycan biosynthesis regulator | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.27 | A4249_RS12445 | | radical SAM family heme chaperone HemW | 0.24 | A4249_RS08700 | | 7-cyano-7-deazaguanine synthase QueC | — | — |
| Synechococcus elongatus PCC 7942 | 0.27 | Synpcc7942_2382 | hemN | coproporphyrinogen III oxidase | 0.44 | Synpcc7942_1333 | | ExsB | low | > 38 |
| Magnetospirillum magneticum AMB-1 | 0.26 | AMB_RS22770 | | radical SAM protein | 0.61 | AMB_RS20345 | | 7-cyano-7-deazaguanine synthase | low | > 64 |
| Sphingomonas koreensis DSMZ 15582 | 0.26 | Ga0059261_2753 | | putative oxygen-independent coproporphyrinogen III oxidase | 0.61 | Ga0059261_3209 | | queuosine biosynthesis protein QueC | low | > 68 |
| Caulobacter crescentus NA1000 Δfur | 0.25 | CCNA_00144 | | oxygen-independent coproporphyrinogen-III oxidase | 0.25 | CCNA_03262 | | queuosine biosynthesis protein QueC | low | > 67 |
| Phocaeicola vulgatus CL09T03C04 | 0.25 | HMPREF1058_RS07680 | | radical SAM family heme chaperone HemW | 0.29 | HMPREF1058_RS15270 | | 7-cyano-7-deazaguanine synthase QueC | low | > 67 |
| Phocaeicola dorei CL03T12C01 | 0.25 | ABI39_RS00100 | | radical SAM family heme chaperone HemW | 0.29 | ABI39_RS11300 | | 7-cyano-7-deazaguanine synthase QueC | low | > 72 |
| Caulobacter crescentus NA1000 | 0.25 | CCNA_00144 | | oxygen-independent coproporphyrinogen-III oxidase | 0.25 | CCNA_03262 | | queuosine biosynthesis protein QueC | low | > 66 |
| Desulfovibrio vulgaris Miyazaki F | 0.25 | DvMF_2374 | | oxygen-independent coproporphyrinogen III oxidase (RefSeq) | 0.24 | DvMF_1125 | | exsB protein (RefSeq) | low | > 51 |
| Parabacteroides merdae CL09T00C40 | 0.24 | HMPREF1078_RS11035 | | radical SAM family heme chaperone HemW | 0.23 | HMPREF1078_RS14060 | | 7-cyano-7-deazaguanine synthase QueC | low | > 61 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.22 | BT2168 | | coproporphyrinogen III oxidase (NCBI ptt file) | 0.27 | BT1566 | | putative aluminum resistance protein (NCBI ptt file) | — | — |
| Bacteroides stercoris CC31F | 0.22 | HMPREF1181_RS06440 | | radical SAM family heme chaperone HemW | 0.28 | HMPREF1181_RS11150 | | 7-cyano-7-deazaguanine synthase QueC | low | > 56 |
Not shown: 9 genomes with orthologs for Psest_0276 only; 4 genomes with orthologs for Psest_1506 only