Conservation of cofitness between PS417_02480 and PS417_05680 in Pseudomonas simiae WCS417

94 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_02480 DNA mismatch repair protein 1.0 PS417_05680 DNA mismatch repair protein MutS 0.40 2
Pseudomonas fluorescens SBW25-INTG 0.98 PFLU_RS02560 DNA mismatch repair endonuclease MutL 0.98 PFLU_RS05765 DNA mismatch repair protein MutS 0.34 89
Pseudomonas fluorescens SBW25 0.98 PFLU_RS02560 DNA mismatch repair endonuclease MutL 0.98 PFLU_RS05765 DNA mismatch repair protein MutS low > 109
Pseudomonas fluorescens FW300-N2E2 0.90 Pf6N2E2_3616 DNA mismatch repair protein MutL 0.93 Pf6N2E2_3035 DNA mismatch repair protein MutS 0.37 4
Pseudomonas fluorescens FW300-N2E3 0.89 AO353_13135 DNA mismatch repair protein 0.94 AO353_16625 DNA mismatch repair protein MutS 0.37 31
Pseudomonas fluorescens FW300-N1B4 0.89 Pf1N1B4_1414 DNA mismatch repair protein MutL 0.93 Pf1N1B4_3117 DNA mismatch repair protein MutS 0.31 25
Pseudomonas fluorescens FW300-N2C3 0.88 AO356_08665 DNA mismatch repair protein 0.93 AO356_05875 DNA mismatch repair protein MutS 0.33 37
Pseudomonas syringae pv. syringae B728a 0.88 Psyr_0570 DNA mismatch repair protein MutL 0.90 Psyr_1376 DNA mismatch repair protein MutS low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.88 Psyr_0570 DNA mismatch repair protein MutL 0.90 Psyr_1376 DNA mismatch repair protein MutS low > 86
Pseudomonas fluorescens GW456-L13 0.88 PfGW456L13_156 DNA mismatch repair protein MutL 0.92 PfGW456L13_4672 DNA mismatch repair protein MutS 0.32 50
Pseudomonas sp. RS175 0.88 PFR28_05119 DNA mismatch repair protein MutL 0.92 PFR28_00429 DNA mismatch repair protein MutS 0.41 15
Pseudomonas putida KT2440 0.85 PP_4896 DNA mismatch repair protein MutL 0.89 PP_1626 DNA mismatch repair protein MutS 0.51 2
Pseudomonas sp. S08-1 0.81 OH686_09480 DNA mismatch repair protein MutL 0.85 OH686_18195 DNA mismatch repair protein MutS 0.91 11
Pseudomonas stutzeri RCH2 0.80 Psest_0681 DNA mismatch repair protein MutL 0.86 Psest_2875 DNA mismatch repair protein MutS 0.41 1
Marinobacter adhaerens HP15 0.60 HP15_2501 DNA mismatch repair protein mutL 0.63 HP15_1047 DNA mismatch repair protein MutS low > 73
Dyella japonica UNC79MFTsu3.2 0.49 ABZR86_RS00855 DNA mismatch repair endonuclease MutL 0.52 ABZR86_RS00630 DNA mismatch repair protein MutS 0.63 1
Rhodanobacter denitrificans MT42 0.49 LRK55_RS14865 DNA mismatch repair endonuclease MutL 0.52 LRK55_RS14650 DNA mismatch repair protein MutS low > 63
Rhodanobacter denitrificans FW104-10B01 0.49 LRK54_RS15150 DNA mismatch repair endonuclease MutL 0.51 LRK54_RS14935 DNA mismatch repair protein MutS low > 59
Rhodanobacter sp. FW510-T8 0.49 OKGIIK_03920 mutL DNA mismatch repair endonuclease MutL 0.52 OKGIIK_03705 mutS DNA mismatch repair protein MutS low > 52
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.2256.1 DNA mismatch repair protein MutL 0.50 Xcc-8004.3760.1 DNA mismatch repair protein MutS low > 74
Lysobacter sp. OAE881 0.46 ABIE51_RS08065 DNA mismatch repair endonuclease MutL 0.52 ABIE51_RS07785 DNA mismatch repair protein MutS low > 62
Dechlorosoma suillum PS 0.46 Dsui_1551 DNA mismatch repair protein MutL 0.50 Dsui_2244 DNA mismatch repair protein MutS low > 51
Ralstonia solanacearum IBSBF1503 0.43 RALBFv3_RS05230 DNA mismatch repair endonuclease MutL 0.47 RALBFv3_RS14920 DNA mismatch repair protein MutS low > 76
Ralstonia solanacearum UW163 0.43 UW163_RS08395 DNA mismatch repair endonuclease MutL 0.47 UW163_RS12390 DNA mismatch repair protein MutS — —
Herbaspirillum seropedicae SmR1 0.43 HSERO_RS04190 DNA mismatch repair protein 0.49 HSERO_RS16360 DNA mismatch repair protein MutS low > 78
Ralstonia solanacearum GMI1000 0.43 RS_RS12850 DNA mismatch repair protein MutL 0.47 RS_RS05735 DNA mismatch repair protein MutS low > 80
Ralstonia sp. UNC404CL21Col 0.43 ABZR87_RS00870 DNA mismatch repair endonuclease MutL 0.47 ABZR87_RS10580 DNA mismatch repair protein MutS 0.44 2
Ralstonia solanacearum PSI07 0.42 RPSI07_RS12070 DNA mismatch repair endonuclease MutL 0.47 RPSI07_RS18440 DNA mismatch repair protein MutS low > 81
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_04712 DNA mismatch repair protein MutL 0.48 H281DRAFT_00537 DNA mismatch repair protein MutS low > 103
Paraburkholderia graminis OAS925 0.41 ABIE53_000877 DNA mismatch repair protein MutL 0.46 ABIE53_002719 DNA mismatch repair protein MutS low > 113
Paraburkholderia sabiae LMG 24235 0.41 QEN71_RS26435 DNA mismatch repair endonuclease MutL 0.45 QEN71_RS06085 DNA mismatch repair protein MutS low > 153
Castellaniella sp019104865 MT123 0.41 ABCV34_RS08785 DNA mismatch repair endonuclease MutL 0.44 ABCV34_RS00270 DNA mismatch repair protein MutS low > 48
Hydrogenophaga sp. GW460-11-11-14-LB1 0.39 GFF5485 DNA mismatch repair protein MutL 0.42 GFF3599 DNA mismatch repair protein MutS low > 90
Variovorax sp. SCN45 0.39 GFF4800 DNA mismatch repair protein MutL 0.41 GFF6634 DNA mismatch repair protein MutS low > 127
Variovorax sp. OAS795 0.39 ABID97_RS20310 DNA mismatch repair endonuclease MutL 0.41 ABID97_RS20815 DNA mismatch repair protein MutS low > 91
Acinetobacter radioresistens SK82 0.38 MPMX26_01207 DNA mismatch repair protein MutL 0.46 MPMX26_01954 DNA mismatch repair protein MutS low > 36
Magnetospirillum magneticum AMB-1 0.38 AMB_RS22340 DNA mismatch repair protein MutL 0.31 AMB_RS01455 DNA mismatch repair protein MutS low > 64
Azospirillum brasilense Sp245 0.36 AZOBR_RS05025 DNA mismatch repair protein MutL 0.30 AZOBR_RS02125 DNA mismatch repair protein MutS low > 97
Brevundimonas sp. GW460-12-10-14-LB2 0.35 A4249_RS04225 DNA mismatch repair endonuclease MutL 0.29 A4249_RS12110 DNA mismatch repair protein MutS low > 48
Azospirillum sp. SherDot2 0.35 MPMX19_01619 DNA mismatch repair protein MutL 0.31 MPMX19_00908 DNA mismatch repair protein MutS low > 112
Vibrio cholerae E7946 ATCC 55056 0.35 CSW01_01825 DNA mismatch repair protein MutL 0.56 CSW01_02840 DNA mismatch repair protein MutS low > 62
Serratia liquefaciens MT49 0.35 IAI46_01615 DNA mismatch repair endonuclease MutL 0.57 IAI46_03800 DNA mismatch repair protein MutS low > 86
Dickeya dadantii 3937 0.35 DDA3937_RS18620 DNA mismatch repair endonuclease MutL 0.56 DDA3937_RS05230 DNA mismatch repair protein MutS low > 74
Pectobacterium carotovorum WPP14 0.35 HER17_RS02575 DNA mismatch repair endonuclease MutL 0.56 HER17_RS16220 DNA mismatch repair protein MutS low > 75
Rhodospirillum rubrum S1H 0.35 Rru_A2946 DNA mismatch repair protein (NCBI) 0.32 Rru_A3541 MutS 1 protein (NCBI) low > 58
Dickeya dianthicola 67-19 0.35 HGI48_RS18555 DNA mismatch repair endonuclease MutL 0.56 HGI48_RS05230 DNA mismatch repair protein MutS low > 71
Pantoea sp. MT58 0.34 IAI47_02580 DNA mismatch repair endonuclease MutL 0.55 IAI47_04240 DNA mismatch repair protein MutS low > 76
Caulobacter crescentus NA1000 0.34 CCNA_00731 DNA mismatch repair protein mutL 0.29 CCNA_00012 DNA mismatch repair protein MutS 0.81 4
Erwinia tracheiphila SCR3 0.34 LU632_RS02045 mutL DNA mismatch repair endonuclease MutL 0.56 LU632_RS06485 mutS DNA mismatch repair protein MutS low > 74
Dickeya dianthicola ME23 0.34 DZA65_RS19690 DNA mismatch repair endonuclease MutL 0.55 DZA65_RS05570 DNA mismatch repair protein MutS low > 75
Caulobacter crescentus NA1000 Δfur 0.34 CCNA_00731 DNA mismatch repair protein mutL 0.29 CCNA_00012 DNA mismatch repair protein MutS low > 67
Klebsiella michiganensis M5al 0.34 BWI76_RS02525 DNA mismatch repair protein MutL 0.56 BWI76_RS22600 DNA mismatch repair protein MutS 0.26 29
Escherichia coli ECRC62 0.34 BNILDI_06960 mutL DNA mismatch repair endonuclease MutL 0.56 BNILDI_10920 mutS DNA mismatch repair protein MutS — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.34 OHPLBJKB_03872 DNA mismatch repair protein MutL 0.56 OHPLBJKB_01000 DNA mismatch repair protein MutS 0.86 2
Escherichia coli ECOR27 0.34 NOLOHH_04530 mutL DNA mismatch repair endonuclease MutL 0.56 NOLOHH_12370 mutS DNA mismatch repair protein MutS low > 57
Phaeobacter inhibens DSM 17395 0.34 PGA1_c32740 DNA mismatch repair protein MutL 0.33 PGA1_c35000 DNA mismatch repair protein MutS low > 62
Enterobacter sp. TBS_079 0.34 MPMX20_00451 DNA mismatch repair protein MutL 0.56 MPMX20_03619 DNA mismatch repair protein MutS 0.18 43
Escherichia fergusonii Becca 0.34 EFB2_04365 DNA mismatch repair protein MutL 0.56 EFB2_01179 DNA mismatch repair protein MutS low > 86
Rahnella sp. WP5 0.34 EX31_RS08830 DNA mismatch repair endonuclease MutL 0.56 EX31_RS07820 DNA mismatch repair protein MutS low > 89
Escherichia coli ECOR38 0.34 HEPCGN_10495 mutL DNA mismatch repair endonuclease MutL 0.56 HEPCGN_19705 mutS DNA mismatch repair protein MutS 0.95 10
Sinorhizobium meliloti 1021 0.34 SMc00932 DNA mismatch repair protein 0.30 SMc01125 DNA mismatch repair protein MutS low > 103
Escherichia coli ECRC98 0.34 JDDGAC_15905 mutL DNA mismatch repair endonuclease MutL 0.56 JDDGAC_24190 mutS DNA mismatch repair protein MutS — —
Escherichia coli ECRC101 0.34 OKFHMN_12265 mutL DNA mismatch repair endonuclease MutL 0.56 OKFHMN_20525 mutS DNA mismatch repair protein MutS — —
Escherichia coli ECRC102 0.34 NIAGMN_10115 mutL DNA mismatch repair endonuclease MutL 0.56 NIAGMN_18295 mutS DNA mismatch repair protein MutS — —
Escherichia coli ECRC99 0.34 KEDOAH_15890 mutL DNA mismatch repair endonuclease MutL 0.56 KEDOAH_07610 mutS DNA mismatch repair protein MutS — —
Escherichia coli ECRC101 0.34 MCAODC_02780 mutL DNA mismatch repair endonuclease MutL 0.56 MCAODC_11050 mutS DNA mismatch repair protein MutS — —
Escherichia coli BL21 0.34 ECD_04037 methyl-directed mismatch repair protein 0.56 ECD_02583 methyl-directed mismatch repair protein low > 60
Escherichia coli BW25113 0.34 b4170 mutL DNA mismatch repair protein (NCBI) 0.56 b2733 mutS DNA mismatch repair protein (NCBI) 0.36 8
Rhizobium sp. OAE497 0.34 ABIE40_RS05235 DNA mismatch repair endonuclease MutL 0.31 ABIE40_RS01775 DNA mismatch repair protein MutS low > 107
Escherichia coli Nissle 1917 0.34 ECOLIN_RS24220 DNA mismatch repair endonuclease MutL 0.56 ECOLIN_RS15275 DNA mismatch repair protein MutS 0.48 34
Agrobacterium fabrum C58 0.33 Atu0699 DNA mismatch repair protein MutL 0.31 Atu0345 DNA mismatch repair protein, MutS family 0.41 3
Dinoroseobacter shibae DFL-12 0.33 Dshi_0363 DNA mismatch repair protein MutL (RefSeq) 0.33 Dshi_3466 DNA mismatch repair protein MutS (RefSeq) low > 64
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.33 GFF823 DNA mismatch repair protein MutL 0.56 GFF4773 DNA mismatch repair protein MutS low > 78
Enterobacter asburiae PDN3 0.33 EX28DRAFT_3367 DNA mismatch repair protein MutL 0.56 EX28DRAFT_2829 DNA mismatch repair protein MutS low > 76
Sphingomonas koreensis DSMZ 15582 0.33 Ga0059261_0371 DNA mismatch repair protein MutL 0.31 Ga0059261_3784 DNA mismatch repair protein MutS low > 68
Rhodopseudomonas palustris CGA009 0.32 TX73_022655 DNA mismatch repair endonuclease MutL 0.32 TX73_002655 DNA mismatch repair protein MutS 0.65 2
Shewanella loihica PV-4 0.31 Shew_0564 DNA mismatch repair protein MutL (RefSeq) 0.54 Shew_1214 DNA mismatch repair protein (RefSeq) 0.74 2
Bosea sp. OAE506 0.31 ABIE41_RS23235 DNA mismatch repair endonuclease MutL 0.31 ABIE41_RS03650 DNA mismatch repair protein MutS low > 77
Shewanella sp. ANA-3 0.31 Shewana3_0595 mutL DNA mismatch repair protein (RefSeq) 0.56 Shewana3_1125 DNA mismatch repair protein MutS (RefSeq) 0.62 4
Shewanella oneidensis MR-1 0.31 SO0601 mutL DNA mismatch repair protein MutL (NCBI ptt file) 0.55 SO3431 mutS DNA mismatch repair protein MutS (NCBI ptt file) 0.53 2
Shewanella amazonensis SB2B 0.30 Sama_3027 mutL DNA mismatch repair protein (RefSeq) 0.54 Sama_1045 DNA mismatch repair protein MutS (RefSeq) 0.88 1
Kangiella aquimarina DSM 16071 0.28 B158DRAFT_1950 DNA mismatch repair protein MutL 0.49 B158DRAFT_1529 DNA mismatch repair protein MutS 0.99 1
Cupriavidus basilensis FW507-4G11 0.26 RR42_RS17205 DNA mismatch repair protein 0.48 RR42_RS06285 DNA mismatch repair protein MutS 0.45 15
Pedobacter sp. GW460-11-11-14-LB5 0.25 CA265_RS17200 DNA mismatch repair protein MutL 0.33 CA265_RS08220 DNA mismatch repair protein MutS low > 88
Pontibacter actiniarum KMM 6156, DSM 19842 0.24 CA264_13305 DNA mismatch repair protein MutL 0.33 CA264_18545 DNA mismatch repair protein MutS — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.24 Echvi_0780 DNA mismatch repair protein MutL 0.32 Echvi_0960 DNA mismatch repair protein MutS — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.23 ABZR88_RS00380 DNA mismatch repair endonuclease MutL 0.34 ABZR88_RS10580 DNA mismatch repair protein MutS — —
Parabacteroides merdae CL09T00C40 0.23 HMPREF1078_RS17005 DNA mismatch repair endonuclease MutL 0.34 HMPREF1078_RS06455 DNA mismatch repair protein MutS low > 61
Phocaeicola dorei CL03T12C01 0.22 ABI39_RS02285 DNA mismatch repair endonuclease MutL 0.33 ABI39_RS05500 DNA mismatch repair protein MutS 0.55 5
Fusobacterium nucleatum SB010 0.22 HUW76_07720 DNA mismatch repair endonuclease MutL 0.33 HUW76_04335 DNA mismatch repair protein MutS low > 35
Phocaeicola vulgatus CL09T03C04 0.22 HMPREF1058_RS02970 DNA mismatch repair endonuclease MutL 0.33 HMPREF1058_RS11435 DNA mismatch repair protein MutS low > 67
Bacteroides stercoris CC31F 0.21 HMPREF1181_RS07405 DNA mismatch repair endonuclease MutL 0.33 HMPREF1181_RS01980 DNA mismatch repair protein MutS — —
Bacteroides thetaiotaomicron VPI-5482 0.19 BT3851 DNA mismatch repair protein mutL (NCBI ptt file) 0.33 BT3121 DNA mismatch repair protein mutS (NCBI ptt file) — —
Burkholderia phytofirmans PsJN 0.18 BPHYT_RS03650 DNA mismatch repair protein 0.47 BPHYT_RS12475 DNA mismatch repair protein MutS 0.69 1
Acidovorax sp. GW101-3H11 0.17 Ac3H11_313 DNA mismatch repair protein MutL 0.43 Ac3H11_3641 DNA mismatch repair protein MutS 0.79 1

Not shown: 0 genomes with orthologs for PS417_02480 only; 5 genomes with orthologs for PS417_05680 only