Conservation of cofitness between Echvi_0628 and Echvi_2376 in Echinicola vietnamensis KMM 6221, DSM 17526

94 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Echinicola vietnamensis KMM 6221, DSM 17526 1.0 Echvi_0628 putative oxygen-independent coproporphyrinogen III oxidase 1.0 Echvi_2376 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB 0.48 14
Pontibacter actiniarum KMM 6156, DSM 19842 0.52 CA264_16765 coproporphyrinogen III oxidase 0.71 CA264_05315 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.46 CA265_RS18155 coproporphyrinogen III oxidase 0.60 CA265_RS21675 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.53 16
Mucilaginibacter yixingensis YX-36 DSM 26809 0.44 ABZR88_RS03545 radical SAM family heme chaperone HemW 0.63 ABZR88_RS18330 MiaB/RimO family radical SAM methylthiotransferase low > 71
Bacteroides thetaiotaomicron VPI-5482 0.42 BT2168 coproporphyrinogen III oxidase (NCBI ptt file) 0.51 BT3195 conserved hypothetical protein (NCBI ptt file) low > 81
Bacteroides stercoris CC31F 0.40 HMPREF1181_RS06440 radical SAM family heme chaperone HemW 0.51 HMPREF1181_RS01770 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 56
Parabacteroides merdae CL09T00C40 0.39 HMPREF1078_RS11035 radical SAM family heme chaperone HemW 0.50 HMPREF1078_RS17135 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 61
Phocaeicola dorei CL03T12C01 0.37 ABI39_RS00100 radical SAM family heme chaperone HemW 0.51 ABI39_RS05650 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.74 3
Phocaeicola vulgatus CL09T03C04 0.36 HMPREF1058_RS07680 radical SAM family heme chaperone HemW 0.51 HMPREF1058_RS11280 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 67
Bacteroides ovatus ATCC 8483 0.34 BACOVA_03177 putative oxygen-independent coproporphyrinogen III oxidase 0.51 BACOVA_02895 tRNA-i(6)A37 thiotransferase enzyme MiaB 0.39 92
Desulfovibrio vulgaris Miyazaki F 0.31 DvMF_2374 oxygen-independent coproporphyrinogen III oxidase (RefSeq) 0.24 DvMF_1330 RNA modification enzyme, MiaB family (RefSeq) low > 51
Caulobacter crescentus NA1000 0.27 CCNA_00144 oxygen-independent coproporphyrinogen-III oxidase 0.26 CCNA_00054 tRNA 2-methylthioadenosine synthase 0.38 7
Caulobacter crescentus NA1000 Δfur 0.27 CCNA_00144 oxygen-independent coproporphyrinogen-III oxidase 0.26 CCNA_00054 tRNA 2-methylthioadenosine synthase low > 67
Brevundimonas sp. GW460-12-10-14-LB2 0.26 A4249_RS12445 radical SAM family heme chaperone HemW 0.29 A4249_RS14720 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 48
Fusobacterium nucleatum SB010 0.26 HUW76_07285 radical SAM family heme chaperone HemW 0.29 HUW76_07655 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 35
Pseudomonas fluorescens FW300-N2E3 0.26 AO353_08200 coproporphyrinogen III oxidase 0.28 AO353_06375 (dimethylallyl)adenosine tRNA methylthiotransferase low > 101
Pseudomonas fluorescens FW300-N2E2 0.26 Pf6N2E2_4593 Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB 0.28 Pf6N2E2_5018 tRNA-i(6)A37 methylthiotransferase low > 103
Pseudomonas sp. RS175 0.26 PFR28_04249 Heme chaperone HemW 0.28 PFR28_03848 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase low > 88
Pseudomonas syringae pv. syringae B728a 0.26 Psyr_0471 coproporphyrinogen III oxidase, anaerobic 0.28 Psyr_4345 tRNA-i(6)A37 thiotransferase enzyme MiaB low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.26 Psyr_0471 coproporphyrinogen III oxidase, anaerobic 0.28 Psyr_4345 tRNA-i(6)A37 thiotransferase enzyme MiaB low > 86
Pseudomonas fluorescens FW300-N1B4 0.25 Pf1N1B4_2334 Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB 0.28 Pf1N1B4_2712 tRNA-i(6)A37 methylthiotransferase low > 87
Pseudomonas simiae WCS417 0.25 PS417_26760 oxidase 0.28 PS417_24625 (dimethylallyl)adenosine tRNA methylthiotransferase low > 88
Pseudomonas fluorescens FW300-N2C3 0.25 AO356_13390 coproporphyrinogen III oxidase 0.28 AO356_15410 (dimethylallyl)adenosine tRNA methylthiotransferase low > 104
Pseudomonas sp. S08-1 0.25 OH686_11020 Oxygen-independent coproporphyrinogen-III oxidase-like protein YggW 0.30 OH686_09215 tRNA-i(6)A37 thiotransferase enzyme MiaB low > 80
Pseudomonas fluorescens SBW25 0.25 PFLU_RS28405 radical SAM family heme chaperone HemW 0.28 PFLU_RS26555 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 109
Pseudomonas fluorescens SBW25-INTG 0.25 PFLU_RS28405 radical SAM family heme chaperone HemW 0.28 PFLU_RS26555 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 109
Azospirillum brasilense Sp245 0.25 AZOBR_RS02195 coproporphyrinogen III oxidase 0.24 AZOBR_RS01475 (dimethylallyl)adenosine tRNA methylthiotransferase low > 97
Pseudomonas fluorescens GW456-L13 0.25 PfGW456L13_1003 Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB 0.28 PfGW456L13_1380 tRNA-i(6)A37 methylthiotransferase low > 87
Vibrio cholerae E7946 ATCC 55056 0.25 CSW01_02425 YggW family oxidoreductase 0.29 CSW01_04915 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.57 5
Rhodopseudomonas palustris CGA009 0.25 TX73_001700 radical SAM family heme chaperone HemW 0.26 TX73_002325 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
Castellaniella sp019104865 MT123 0.25 ABCV34_RS03525 radical SAM family heme chaperone HemW 0.30 ABCV34_RS15345 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 48
Phaeobacter inhibens DSM 17395 0.25 PGA1_c35050 oxygen-independent coproporphyrinogen III oxidase HemN 0.29 PGA1_c04710 (dimethylallyl)adenosine tRNA methylthiotransferase MiaB low > 62
Synechococcus elongatus PCC 7942 0.25 Synpcc7942_2382 hemN coproporphyrinogen III oxidase 0.28 Synpcc7942_2374 tRNA-i(6)A37 thiotransferase enzyme MiaB low > 38
Bifidobacterium breve UCC2003 0.24 BBR_RS15235 coproporphyrinogen III oxidase 0.24 BBR_RS16570 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 34
Dyella japonica UNC79MFTsu3.2 0.24 ABZR86_RS11910 radical SAM family heme chaperone HemW 0.28 ABZR86_RS09895 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 74
Mycobacterium tuberculosis H37Rv 0.24 Rv2388c Probable oxygen-independent coproporphyrinogen III oxidase HemN (coproporphyrinogenase) (coprogen oxidase) 0.27 Rv2733c Conserved hypothetical alanine, arginine-rich protein low > 58
Azospirillum sp. SherDot2 0.24 MPMX19_02574 Heme chaperone HemW 0.25 MPMX19_02511 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase low > 112
Escherichia coli Nissle 1917 0.23 ECOLIN_RS16435 radical SAM family heme chaperone HemW 0.30 ECOLIN_RS03555 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
Rahnella sp. WP5 0.23 EX31_RS02710 radical SAM family heme chaperone HemW 0.30 EX31_RS23205 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 89
Dechlorosoma suillum PS 0.23 Dsui_0491 putative oxygen-independent coproporphyrinogen III oxidase 0.30 Dsui_1194 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB low > 51
Burkholderia phytofirmans PsJN 0.23 BPHYT_RS15335 coproporphyrinogen III oxidase 0.30 BPHYT_RS16535 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase low > 109
Escherichia fergusonii Becca 0.23 EFB2_00947 Heme chaperone HemW 0.30 EFB2_03438 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase low > 86
Klebsiella michiganensis M5al 0.23 BWI76_RS24120 YggW family oxidoreductase 0.30 BWI76_RS08135 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
Escherichia coli ECOR38 0.23 HEPCGN_18540 hemW radical SAM family heme chaperone HemW 0.30 HEPCGN_01005 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 85
Paraburkholderia sabiae LMG 24235 0.23 QEN71_RS03635 radical SAM family heme chaperone HemW 0.30 QEN71_RS02195 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 153
Paraburkholderia bryophila 376MFSha3.1 0.23 H281DRAFT_04010 oxygen-independent coproporphyrinogen-3 oxidase 0.30 H281DRAFT_04239 tRNA-i(6)A37 thiotransferase enzyme MiaB low > 103
Dinoroseobacter shibae DFL-12 0.23 Dshi_3460 putative oxygen-independent coproporphyrinogen III oxidase (RefSeq) 0.31 Dshi_1019 RNA modification enzyme, MiaB family (RefSeq) low > 64
Xanthomonas campestris pv. campestris strain 8004 0.23 Xcc-8004.1224.1 Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB 0.28 Xcc-8004.2224.1 tRNA-i(6)A37 methylthiotransferase low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.23 GFF3058 Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB 0.30 GFF4579 tRNA-i(6)A37 methylthiotransferase low > 78
Escherichia coli BL21 0.23 ECD_02785 HemN family putative oxidoreductase 0.30 ECD_00629 tRNA-i(6)A37 methylthiotransferase low > 60
Escherichia coli ECRC101 0.23 MCAODC_09755 hemW radical SAM family heme chaperone HemW 0.30 MCAODC_26440 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
Escherichia coli HS(pFamp)R (ATCC 700891) 0.23 OHPLBJKB_00761 Oxygen-independent coproporphyrinogen-III oxidase-like protein YqeR 0.30 OHPLBJKB_03051 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase low > 73
Escherichia coli ECRC98 0.23 JDDGAC_22865 hemW radical SAM family heme chaperone HemW 0.30 JDDGAC_10870 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
Escherichia coli ECRC102 0.23 NIAGMN_17000 hemW radical SAM family heme chaperone HemW 0.30 NIAGMN_05280 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
Escherichia coli BW25113 0.23 b2955 yggW coproporphyrinogen III oxidase (NCBI) 0.30 b0661 miaB isopentenyl-adenosine A37 tRNA methylthiolase (NCBI) low > 76
Magnetospirillum magneticum AMB-1 0.23 AMB_RS22770 radical SAM protein 0.25 AMB_RS22585 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase low > 64
Escherichia coli ECRC101 0.23 OKFHMN_19235 hemW radical SAM family heme chaperone HemW 0.30 OKFHMN_07225 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
Escherichia coli ECRC99 0.23 KEDOAH_08905 hemW radical SAM family heme chaperone HemW 0.30 KEDOAH_20745 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
Serratia liquefaciens MT49 0.23 IAI46_21435 radical SAM family heme chaperone HemW 0.29 IAI46_06025 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 86
Pantoea sp. MT58 0.23 IAI47_03580 radical SAM family heme chaperone HemW 0.28 IAI47_13945 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 76
Escherichia coli ECRC62 0.23 BNILDI_09685 hemW radical SAM family heme chaperone HemW 0.30 BNILDI_21610 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
Enterobacter asburiae PDN3 0.23 EX28DRAFT_2993 putative oxygen-independent coproporphyrinogen III oxidase 0.29 EX28DRAFT_2310 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB low > 76
Rhodanobacter denitrificans MT42 0.23 LRK55_RS11460 radical SAM family heme chaperone HemW 0.28 LRK55_RS13465 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 63
Lysobacter sp. OAE881 0.23 ABIE51_RS17300 radical SAM family heme chaperone HemW 0.29 ABIE51_RS15455 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 62
Escherichia coli ECOR27 0.23 NOLOHH_11105 hemW radical SAM family heme chaperone HemW 0.30 NOLOHH_23605 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 57
Dickeya dadantii 3937 0.22 DDA3937_RS17325 radical SAM family heme chaperone HemW 0.29 DDA3937_RS06250 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 74
Dickeya dianthicola 67-19 0.22 HGI48_RS17370 radical SAM family heme chaperone HemW 0.29 HGI48_RS06295 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 71
Enterobacter sp. TBS_079 0.22 MPMX20_03813 Heme chaperone HemW 0.29 MPMX20_01311 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase low > 85
Rhizobium sp. OAE497 0.22 ABIE40_RS01625 radical SAM family heme chaperone HemW 0.28 ABIE40_RS01705 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
Shewanella oneidensis MR-1 0.22 SO3359 oxygen-independent coproporphyrinogen III oxidase, putative (NCBI ptt file) 0.29 SO1181 miaB tRNA-i(6)A37 modification enzyme MiaB (NCBI ptt file) 0.28 36
Agrobacterium fabrum C58 0.22 Atu0325 oxygen-independent coproporphyrinogen III oxidase 0.28 Atu0356 miaB protein
Rhodanobacter denitrificans FW104-10B01 0.22 LRK54_RS11735 radical SAM family heme chaperone HemW 0.27 LRK54_RS13750 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 59
Ralstonia solanacearum PSI07 0.22 RPSI07_RS13830 oxygen-independent coproporphyrinogen III oxidase-like protein 0.28 RPSI07_RS21380 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 81
Shewanella sp. ANA-3 0.22 Shewana3_1188 putative oxygen-independent coproporphyrinogen III oxidase (RefSeq) 0.29 Shewana3_1008 tRNA-i(6)A37 thiotransferase enzyme MiaB (RefSeq) low > 73
Pseudomonas stutzeri RCH2 0.22 Psest_0276 putative oxygen-independent coproporphyrinogen III oxidase 0.29 Psest_0532 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB low > 67
Erwinia tracheiphila SCR3 0.22 LU632_RS05445 hemW radical SAM family heme chaperone HemW 0.31 LU632_RS16305 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 74
Sphingomonas koreensis DSMZ 15582 0.22 Ga0059261_2753 putative oxygen-independent coproporphyrinogen III oxidase 0.26 Ga0059261_1604 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB low > 68
Sinorhizobium meliloti 1021 0.22 SMc01147 coproporphyrinogen III oxidase 0.27 SMc01115 (dimethylallyl)adenosine tRNA methylthiotransferase low > 103
Bosea sp. OAE506 0.22 ABIE41_RS03305 radical SAM family heme chaperone HemW 0.28 ABIE41_RS04495 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 77
Pectobacterium carotovorum WPP14 0.22 HER17_RS03785 radical SAM family heme chaperone HemW 0.30 HER17_RS15165 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 75
Alteromonas macleodii MIT1002 0.22 MIT1002_00939 Oxygen-independent coproporphyrinogen-III oxidase 1 0.31 MIT1002_01480 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB low > 70
Rhodanobacter sp. FW510-T8 0.22 OKGIIK_12160 hemW radical SAM family heme chaperone HemW 0.28 OKGIIK_02990 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 52
Dickeya dianthicola ME23 0.22 DZA65_RS18460 radical SAM family heme chaperone HemW 0.29 DZA65_RS06640 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 75
Hydrogenophaga sp. GW460-11-11-14-LB1 0.22 GFF3256 Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB 0.28 GFF613 tRNA-i(6)A37 methylthiotransferase low > 90
Cupriavidus basilensis FW507-4G11 0.22 RR42_RS04880 coproporphyrinogen III oxidase 0.29 RR42_RS02855 dimethylallyladenosine tRNA methylthiotransferase low > 128
Acidovorax sp. GW101-3H11 0.22 Ac3H11_3672 Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB 0.29 Ac3H11_4008 tRNA-i(6)A37 methylthiotransferase low > 79
Herbaspirillum seropedicae SmR1 0.21 HSERO_RS10665 coproporphyrinogen III oxidase 0.30 HSERO_RS03615 (dimethylallyl)adenosine tRNA methylthiotransferase low > 78
Acinetobacter radioresistens SK82 0.21 MPMX26_00308 Heme chaperone HemW 0.28 MPMX26_02667 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase low > 36
Variovorax sp. SCN45 0.21 GFF2383 Oxygen-independent coproporphyrinogen-III oxidase-like protein YggW 0.28 GFF7320 tRNA-i(6)A37 methylthiotransferase (EC 2.8.4.3) low > 127
Variovorax sp. OAS795 0.21 ABID97_RS23630 radical SAM family heme chaperone HemW 0.28 ABID97_RS06475 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 91
Shewanella loihica PV-4 0.21 Shew_1131 putative oxygen-independent coproporphyrinogen III oxidase (RefSeq) 0.29 Shew_2923 tRNA-i(6)A37 thiotransferase enzyme MiaB (RefSeq) low > 60
Ralstonia sp. UNC404CL21Col 0.20 ABZR87_RS15265 radical SAM family heme chaperone HemW 0.28 ABZR87_RS07780 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 80
Shewanella amazonensis SB2B 0.20 Sama_2483 oxygen-independent coproporphyrinogen III oxidase, putative (RefSeq) 0.30 Sama_2575 tRNA-i(6)A37 modification enzyme MiaB (RefSeq) 0.39 62
Kangiella aquimarina DSM 16071 0.20 B158DRAFT_0201 coproporphyrinogen III oxidase, anaerobic (EC 1.3.99.22) 0.29 B158DRAFT_0099 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB low > 40
Marinobacter adhaerens HP15 0.18 HP15_280 putative oxygen-independent coproporphyrinogen III oxidase 0.28 HP15_2466 tRNA-i(6)A37 thiotransferase enzyme MiaB low > 73

Not shown: 2 genomes with orthologs for Echvi_0628 only; 7 genomes with orthologs for Echvi_2376 only