Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Echinicola vietnamensis KMM 6221, DSM 17526 | 1.0 | Echvi_1243 | | glutamate synthases, NADH/NADPH, small subunit | 1.0 | Echvi_2055 | | dihydroxy-acid dehydratase | 0.90 | 11 |
Vibrio cholerae E7946 ATCC 55056 | 0.56 | CSW01_12025 | | glutamate synthase subunit beta | 0.30 | CSW01_00140 | | dihydroxy-acid dehydratase | low | > 62 |
Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.56 | ABZR88_RS06910 | | glutamate synthase subunit beta | 0.59 | ABZR88_RS11575 | | dihydroxy-acid dehydratase | 0.45 | 47 |
Pedobacter sp. GW460-11-11-14-LB5 | 0.55 | CA265_RS08705 | | glutamate synthase | 0.61 | CA265_RS15795 | | dihydroxy-acid dehydratase | 0.80 | 41 |
Ralstonia sp. UNC404CL21Col | 0.53 | ABZR87_RS02565 | | glutamate synthase subunit beta | 0.48 | ABZR87_RS00135 | | dihydroxy-acid dehydratase | low | > 80 |
Paraburkholderia sabiae LMG 24235 | 0.52 | QEN71_RS28005 | | glutamate synthase subunit beta | 0.49 | QEN71_RS25185 | | dihydroxy-acid dehydratase | low | > 153 |
Variovorax sp. OAS795 | 0.52 | ABID97_RS23220 | | glutamate synthase subunit beta | 0.49 | ABID97_RS17500 | | dihydroxy-acid dehydratase | — | — |
Paraburkholderia bryophila 376MFSha3.1 | 0.51 | H281DRAFT_05621 | | glutamate synthase (NADH) small subunit | 0.49 | H281DRAFT_00127 | | dihydroxyacid dehydratase | low | > 103 |
Burkholderia phytofirmans PsJN | 0.51 | BPHYT_RS17850 | | dihydropyrimidine dehydrogenase subunit A | 0.48 | BPHYT_RS04815 | | dihydroxy-acid dehydratase | — | — |
Paraburkholderia graminis OAS925 | 0.51 | ABIE53_003732 | | glutamate synthase (NADPH/NADH) small chain | 0.49 | ABIE53_001239 | | dihydroxy-acid dehydratase | — | — |
Ralstonia solanacearum UW163 | 0.51 | UW163_RS06705 | | glutamate synthase subunit beta | 0.48 | UW163_RS09135 | | dihydroxy-acid dehydratase | — | — |
Ralstonia solanacearum IBSBF1503 | 0.51 | RALBFv3_RS06910 | | glutamate synthase subunit beta | 0.48 | RALBFv3_RS04535 | | dihydroxy-acid dehydratase | — | — |
Cupriavidus basilensis FW507-4G11 | 0.51 | RR42_RS18985 | | glutamate synthase | 0.48 | RR42_RS16210 | | dihydroxy-acid dehydratase | — | — |
Ralstonia solanacearum GMI1000 | 0.51 | RS_RS14855 | | glutamate synthase subunit beta | 0.48 | RS_RS12105 | | dihydroxy-acid dehydratase | — | — |
Ralstonia solanacearum PSI07 | 0.51 | RPSI07_RS10325 | | glutamate synthase subunit beta | 0.48 | RPSI07_RS12840 | | dihydroxy-acid dehydratase | — | — |
Acidovorax sp. GW101-3H11 | 0.50 | Ac3H11_4711 | | Glutamate synthase [NADPH] small chain (EC 1.4.1.13) | 0.49 | Ac3H11_954 | | Dihydroxy-acid dehydratase (EC 4.2.1.9) | low | > 79 |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.50 | GFF1326 | | Glutamate synthase [NADPH] small chain (EC 1.4.1.13) | 0.50 | GFF4111 | | Dihydroxy-acid dehydratase (EC 4.2.1.9) | — | — |
Magnetospirillum magneticum AMB-1 | 0.49 | AMB_RS11780 | | glutamate synthase subunit beta | 0.31 | AMB_RS12770 | | dihydroxy-acid dehydratase | — | — |
Dechlorosoma suillum PS | 0.49 | Dsui_1097 | | NADH/NADPH-dependent glutamate synthase small subunit | 0.30 | Dsui_1122 | | dihydroxy-acid dehydratase | — | — |
Rhodanobacter sp. FW510-T8 | 0.49 | OKGIIK_15205 | | Glutamate synthase | 0.40 | OKGIIK_13600 | ilvD | dihydroxy-acid dehydratase | low | > 52 |
Castellaniella sp019104865 MT123 | 0.49 | ABCV34_RS11155 | | glutamate synthase subunit beta | 0.47 | ABCV34_RS14820 | | dihydroxy-acid dehydratase | low | > 48 |
Variovorax sp. SCN45 | 0.49 | GFF5333 | | Glutamate synthase [NADPH] small chain (EC 1.4.1.13) | 0.49 | GFF471 | | Dihydroxy-acid dehydratase (EC 4.2.1.9) | — | — |
Rhodopseudomonas palustris CGA009 | 0.48 | TX73_004595 | | glutamate synthase subunit beta | 0.32 | TX73_007515 | | dihydroxy-acid dehydratase | — | — |
Herbaspirillum seropedicae SmR1 | 0.48 | HSERO_RS19590 | | dihydropyrimidine dehydrogenase subunit A | 0.30 | HSERO_RS02650 | | dihydroxy-acid dehydratase | 0.50 | 13 |
Mycobacterium tuberculosis H37Rv | 0.47 | Rv3858c | | Probable NADH-dependent glutamate synthase (small subunit) GltD (L-glutamate synthase) (L-glutamate synthetase) (NADH-glutamate synthase) (glutamate synthase (NADH)) (GLTS beta chain) (NADPH-GOGAT) | 0.44 | Rv0189c | | Probable dihydroxy-acid dehydratase IlvD (dad) | — | — |
Bifidobacterium breve UCC2003 | 0.44 | BBR_RS15260 | | glutamate synthase subunit beta | 0.31 | BBR_RS17635 | | dihydroxy-acid dehydratase | low | > 34 |
Rhizobium sp. OAE497 | 0.44 | ABIE40_RS16270 | | glutamate synthase subunit beta | 0.31 | ABIE40_RS08005 | | dihydroxy-acid dehydratase | — | — |
Sinorhizobium meliloti 1021 | 0.42 | SMc04026 | | glutamate synthase | 0.32 | SMc04045 | | dihydroxy-acid dehydratase | 0.88 | 11 |
Parabacteroides merdae CL09T00C40 | 0.41 | HMPREF1078_RS01265 | | glutamate synthase subunit beta | 0.30 | HMPREF1078_RS16695 | | dihydroxy-acid dehydratase | low | > 61 |
Agrobacterium fabrum C58 | 0.41 | Atu3783 | | glutamate synthase subunit beta | 0.30 | Atu1918 | | dihydroxy-acid dehydratase | — | — |
Bacteroides ovatus ATCC 8483 | 0.40 | BACOVA_03757 | | pyridine nucleotide-disulfide oxidoreductase | 0.30 | BACOVA_03302 | | dihydroxy-acid dehydratase | low | > 94 |
Bacteroides thetaiotaomicron VPI-5482 | 0.40 | BT0552 | | glutamate synthase, small subunit (NCBI ptt file) | 0.31 | BT2078 | | dihydroxy-acid dehydratase (NCBI ptt file) | low | > 81 |
Phocaeicola dorei CL03T12C01 | 0.39 | ABI39_RS20690 | | glutamate synthase subunit beta | 0.30 | ABI39_RS12715 | | dihydroxy-acid dehydratase | low | > 72 |
Bosea sp. OAE506 | 0.39 | ABIE41_RS08570 | | glutamate synthase subunit beta | 0.45 | ABIE41_RS15690 | | dihydroxy-acid dehydratase | — | — |
Phocaeicola vulgatus CL09T03C04 | 0.38 | HMPREF1058_RS06925 | | glutamate synthase subunit beta | 0.30 | HMPREF1058_RS16815 | | dihydroxy-acid dehydratase | low | > 67 |
Bacteroides stercoris CC31F | 0.37 | HMPREF1181_RS16050 | | glutamate synthase subunit beta | 0.30 | HMPREF1181_RS08335 | | dihydroxy-acid dehydratase | low | > 56 |
Brevundimonas sp. GW460-12-10-14-LB2 | 0.25 | A4249_RS16110 | | NAD(P)-dependent oxidoreductase | 0.35 | A4249_RS10030 | | dihydroxy-acid dehydratase | 0.99 | 24 |
Sphingomonas koreensis DSMZ 15582 | 0.25 | Ga0059261_1797 | | glutamate synthase small subunit family protein, proteobacterial | 0.41 | Ga0059261_4216 | | Dihydroxyacid dehydratase/phosphogluconate dehydratase | 0.79 | 20 |
Azospirillum sp. SherDot2 | 0.25 | MPMX19_02658 | | Glutamate synthase [NADPH] small chain | 0.30 | MPMX19_05356 | | Dihydroxy-acid dehydratase | — | — |
Rhodospirillum rubrum S1H | 0.25 | Rru_A0018 | | Glutamate synthase, NADH/NADPH, small subunit 2 (NCBI) | 0.30 | Rru_A1786 | | Dihydroxy-acid dehydratase (NCBI) | — | — |
Xanthomonas campestris pv. campestris strain 8004 | 0.25 | Xcc-8004.43.1 | | Glutamate synthase [NADPH] small chain (EC 1.4.1.13) | 0.29 | Xcc-8004.451.1 | | Dihydroxy-acid dehydratase (EC 4.2.1.9) | 0.88 | 14 |
Dyella japonica UNC79MFTsu3.2 | 0.24 | ABZR86_RS16800 | | FAD-dependent oxidoreductase | 0.39 | ABZR86_RS15945 | | dihydroxy-acid dehydratase | 0.85 | 59 |
Lysobacter sp. OAE881 | 0.24 | ABIE51_RS01315 | | FAD-dependent oxidoreductase | 0.36 | ABIE51_RS17540 | | dihydroxy-acid dehydratase | 0.97 | 18 |
Alteromonas macleodii MIT1002 | 0.24 | MIT1002_03140 | | Glutamate synthase [NADPH] small chain | 0.32 | MIT1002_04041 | | Dihydroxy-acid dehydratase | 0.98 | 7 |
Rhodanobacter denitrificans FW104-10B01 | 0.24 | LRK54_RS10965 | | FAD-dependent oxidoreductase | 0.37 | LRK54_RS10320 | | dihydroxy-acid dehydratase | 0.81 | 22 |
Rhodanobacter denitrificans MT42 | 0.24 | LRK55_RS10670 | | FAD-dependent oxidoreductase | 0.37 | LRK55_RS09960 | | dihydroxy-acid dehydratase | low | > 63 |
Pseudomonas fluorescens FW300-N1B4 | 0.24 | Pf1N1B4_1533 | | Glutamate synthase [NADPH] small chain (EC 1.4.1.13) | 0.32 | Pf1N1B4_2303 | | Dihydroxy-acid dehydratase (EC 4.2.1.9) | 0.75 | 24 |
Acinetobacter radioresistens SK82 | 0.24 | MPMX26_02807 | | Glutamate synthase [NADPH] small chain | 0.50 | MPMX26_03019 | | Dihydroxy-acid dehydratase | low | > 36 |
Pseudomonas fluorescens FW300-N2E3 | 0.24 | AO353_12520 | | glutamate synthase | 0.32 | AO353_08345 | | dihydroxy-acid dehydratase | 0.76 | 14 |
Pseudomonas fluorescens FW300-N2E2 | 0.24 | Pf6N2E2_3751 | | Glutamate synthase [NADPH] small chain (EC 1.4.1.13) | 0.31 | Pf6N2E2_4564 | | Dihydroxy-acid dehydratase (EC 4.2.1.9) | 0.79 | 4 |
Pseudomonas stutzeri RCH2 | 0.24 | Psest_3710 | | glutamate synthase small subunit family protein, proteobacterial | 0.31 | Psest_0234 | | dihydroxy-acid dehydratase | — | — |
Pseudomonas sp. RS175 | 0.24 | PFR28_05016 | | Glutamate synthase [NADPH] small chain | 0.32 | PFR28_04278 | | Dihydroxy-acid dehydratase | 0.38 | 18 |
Pseudomonas fluorescens FW300-N2C3 | 0.24 | AO356_09370 | | glutamate synthase | 0.31 | AO356_13250 | | dihydroxy-acid dehydratase | 0.74 | 15 |
Pseudomonas fluorescens GW456-L13 | 0.24 | PfGW456L13_271 | | Glutamate synthase [NADPH] small chain (EC 1.4.1.13) | 0.52 | PfGW456L13_3725 | | Dihydroxy-acid dehydratase (EC 4.2.1.9) | low | > 87 |
Serratia liquefaciens MT49 | 0.23 | IAI46_22350 | | glutamate synthase small subunit | 0.32 | IAI46_24345 | | dihydroxy-acid dehydratase | 0.76 | 23 |
Pseudomonas simiae WCS417 | 0.23 | PS417_02005 | | glutamate synthase | 0.31 | PS417_26890 | | dihydroxy-acid dehydratase | 0.81 | 7 |
Pseudomonas syringae pv. syringae B728a | 0.23 | Psyr_0412 | | glutamate synthase (NADPH) small subunit | 0.32 | Psyr_0469 | | dihydroxyacid dehydratase | 0.75 | 13 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.23 | Psyr_0412 | | glutamate synthase (NADPH) small subunit | 0.32 | Psyr_0469 | | dihydroxyacid dehydratase | 0.86 | 4 |
Pseudomonas fluorescens SBW25 | 0.23 | PFLU_RS02050 | | NAD(P)-binding protein | 0.31 | PFLU_RS28535 | | dihydroxy-acid dehydratase | low | > 109 |
Pseudomonas fluorescens SBW25-INTG | 0.23 | PFLU_RS02050 | | NAD(P)-binding protein | 0.31 | PFLU_RS28535 | | dihydroxy-acid dehydratase | low | > 109 |
Pseudomonas putida KT2440 | 0.23 | PP_5075 | | glutamate synthase (NADPH) beta subunit | 0.31 | PP_5128 | | Dihydroxy-acid dehydratase | 0.32 | 37 |
Dinoroseobacter shibae DFL-12 | 0.23 | Dshi_0001 | | glutamate synthase, small subunit (RefSeq) | 0.42 | Dshi_0129 | | dihydroxy-acid dehydratase (RefSeq) | — | — |
Phaeobacter inhibens DSM 17395 | 0.23 | PGA1_c36090 | | glutamate synthase [NADPH] small chain | 0.30 | PGA1_c29490 | | dihydroxy-acid dehydratase LivD | 0.72 | 15 |
Escherichia coli ECRC99 | 0.23 | KEDOAH_10270 | gltD | glutamate synthase subunit GltD | 0.32 | KEDOAH_13510 | ilvD | dihydroxy-acid dehydratase | — | — |
Escherichia coli ECRC101 | 0.23 | MCAODC_08400 | gltD | glutamate synthase subunit GltD | 0.32 | MCAODC_05145 | ilvD | dihydroxy-acid dehydratase | — | — |
Escherichia coli ECRC102 | 0.23 | NIAGMN_15640 | gltD | glutamate synthase subunit GltD | 0.32 | NIAGMN_12395 | ilvD | dihydroxy-acid dehydratase | — | — |
Escherichia coli BW25113 | 0.23 | b3213 | gltD | glutamate synthase, 4Fe-4S protein, small subunit (NCBI) | 0.32 | b3771 | ilvD | dihydroxy-acid dehydratase (NCBI) | 0.55 | 25 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.23 | OHPLBJKB_00487 | | Glutamate synthase [NADPH] small chain | 0.32 | OHPLBJKB_04282 | | Dihydroxy-acid dehydratase | low | > 73 |
Escherichia coli ECRC101 | 0.23 | OKFHMN_17880 | gltD | glutamate synthase subunit GltD | 0.32 | OKFHMN_14640 | ilvD | dihydroxy-acid dehydratase | — | — |
Escherichia coli BL21 | 0.23 | ECD_03078 | | glutamate synthase, 4Fe-4S protein, small subunit | 0.32 | ECD_03649 | | dihydroxyacid dehydratase | 0.82 | 5 |
Escherichia coli ECOR27 | 0.23 | NOLOHH_09680 | gltD | glutamate synthase subunit GltD | 0.32 | NOLOHH_06775 | ilvD | dihydroxy-acid dehydratase | low | > 57 |
Escherichia coli Nissle 1917 | 0.23 | ECOLIN_RS18480 | | glutamate synthase subunit GltD | 0.32 | ECOLIN_RS21665 | | dihydroxy-acid dehydratase | low | > 52 |
Shewanella loihica PV-4 | 0.23 | Shew_1031 | gltD | glutamate synthase subunit beta (RefSeq) | 0.31 | Shew_0292 | | dihydroxy-acid dehydratase (RefSeq) | 0.97 | 19 |
Escherichia fergusonii Becca | 0.23 | EFB2_00610 | | Glutamate synthase [NADPH] small chain | 0.32 | EFB2_04865 | | Dihydroxy-acid dehydratase | low | > 86 |
Escherichia coli ECRC98 | 0.23 | JDDGAC_21505 | gltD | glutamate synthase subunit GltD | 0.32 | JDDGAC_18260 | ilvD | dihydroxy-acid dehydratase | — | — |
Shewanella sp. ANA-3 | 0.23 | Shewana3_3051 | gltD | glutamate synthase subunit beta (RefSeq) | 0.31 | Shewana3_0358 | | dihydroxy-acid dehydratase (RefSeq) | 0.90 | 10 |
Escherichia coli ECOR38 | 0.23 | HEPCGN_16755 | gltD | glutamate synthase subunit GltD | 0.32 | HEPCGN_13350 | ilvD | dihydroxy-acid dehydratase | low | > 85 |
Dickeya dadantii 3937 | 0.23 | DDA3937_RS01660 | | FAD-dependent oxidoreductase | 0.32 | DDA3937_RS20155 | | dihydroxy-acid dehydratase | 0.89 | 25 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.23 | GFF2957 | | Glutamate synthase [NADPH] small chain (EC 1.4.1.13) | 0.32 | GFF2901 | | Dihydroxy-acid dehydratase (EC 4.2.1.9) | low | > 78 |
Marinobacter adhaerens HP15 | 0.23 | HP15_483 | | oxidoreductase Fe-S binding subunit | 0.53 | HP15_3363 | | dihydroxy-acid dehydratase | — | — |
Pseudomonas sp. S08-1 | 0.23 | OH686_10000 | | Glutamate synthase [NADPH] small chain | 0.31 | OH686_14100 | | dihydroxy-acid dehydratase | 0.89 | 11 |
Shewanella oneidensis MR-1 | 0.23 | SO1324 | gltD | glutamate synthase, small subunit (NCBI ptt file) | 0.30 | SO4345 | ilvD | dihydroxy-acid dehydratase (NCBI ptt file) | 0.88 | 18 |
Shewanella amazonensis SB2B | 0.23 | Sama_0856 | gltD | glutamate synthase subunit beta (RefSeq) | 0.31 | Sama_3279 | | dihydroxy-acid dehydratase (RefSeq) | 0.84 | 19 |
Rahnella sp. WP5 | 0.23 | EX31_RS12510 | | FAD-dependent oxidoreductase | 0.29 | EX31_RS15005 | | dihydroxy-acid dehydratase | 0.96 | 13 |
Dickeya dianthicola ME23 | 0.23 | DZA65_RS01630 | | FAD-dependent oxidoreductase | 0.32 | DZA65_RS21335 | | dihydroxy-acid dehydratase | 0.85 | 20 |
Dickeya dianthicola 67-19 | 0.23 | HGI48_RS01555 | | glutamate synthase small subunit | 0.32 | HGI48_RS20295 | | dihydroxy-acid dehydratase | 0.93 | 4 |
Erwinia tracheiphila SCR3 | 0.22 | LU632_RS21320 | | glutamate synthase small subunit | 0.30 | LU632_RS24400 | ilvD | dihydroxy-acid dehydratase | 0.73 | 51 |
Pectobacterium carotovorum WPP14 | 0.22 | HER17_RS19915 | | glutamate synthase small subunit | 0.31 | HER17_RS01075 | | dihydroxy-acid dehydratase | low | > 75 |
Caulobacter crescentus NA1000 Δfur | 0.21 | CCNA_03721 | | glutamate synthase (NADPH) small chain GltD | 0.30 | CCNA_03139 | | dihydroxy-acid dehydratase | low | > 67 |
Caulobacter crescentus NA1000 | 0.21 | CCNA_03721 | | glutamate synthase (NADPH) small chain GltD | 0.30 | CCNA_03139 | | dihydroxy-acid dehydratase | 0.91 | 11 |
Desulfovibrio vulgaris Hildenborough JW710 | 0.18 | DVU2476 | gltA | glutamate synthase, small subunit (TIGR) | 0.38 | DVU3373 | ilvD | dihydroxy-acid dehydratase (TIGR) | low | > 55 |
Desulfovibrio vulgaris Miyazaki F | 0.17 | DvMF_0938 | | putative oxidoreductase (RefSeq) | 0.38 | DvMF_2034 | | dihydroxy-acid dehydratase (RefSeq) | 0.27 | 9 |
Not shown: 0 genomes with orthologs for Echvi_1243 only; 10 genomes with orthologs for Echvi_2055 only