Conservation of cofitness between ECD_03509 and ECD_03701 in Escherichia coli BL21

93 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03509 ATP-dependent DNA helicase 1.0 ECD_03701 ATP-dependent DNA helicase 0.81 8
Escherichia coli BW25113 1.00 b3652 recG ATP-dependent DNA helicase (NCBI) 0.99 b3822 recQ ATP-dependent DNA helicase (NCBI) low > 76
Escherichia coli ECRC62 1.00 BNILDI_04090 recG ATP-dependent DNA helicase RecG 1.00 BNILDI_05040 recQ ATP-dependent DNA helicase RecQ — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00049 ATP-dependent DNA helicase RecG 1.00 OHPLBJKB_04229 ATP-dependent DNA helicase RecQ 0.70 18
Escherichia coli Nissle 1917 0.99 ECOLIN_RS20800 ATP-dependent DNA helicase RecG 0.99 ECOLIN_RS21935 ATP-dependent DNA helicase RecQ low > 52
Escherichia coli ECOR27 0.99 NOLOHH_07425 recG ATP-dependent DNA helicase RecG 1.00 NOLOHH_06490 recQ ATP-dependent DNA helicase RecQ low > 57
Escherichia fergusonii Becca 0.99 EFB2_00136 ATP-dependent DNA helicase RecG 1.00 EFB2_04815 ATP-dependent DNA helicase RecQ 0.42 38
Escherichia coli ECRC99 0.99 KEDOAH_12600 recG ATP-dependent DNA helicase RecG 1.00 KEDOAH_13790 recQ ATP-dependent DNA helicase RecQ — —
Escherichia coli ECRC101 0.99 MCAODC_06055 recG ATP-dependent DNA helicase RecG 1.00 MCAODC_04865 recQ ATP-dependent DNA helicase RecQ — —
Escherichia coli ECRC102 0.99 NIAGMN_13305 recG ATP-dependent DNA helicase RecG 1.00 NIAGMN_12115 recQ ATP-dependent DNA helicase RecQ — —
Escherichia coli ECRC101 0.99 OKFHMN_15545 recG ATP-dependent DNA helicase RecG 1.00 OKFHMN_14360 recQ ATP-dependent DNA helicase RecQ — —
Escherichia coli ECOR38 0.99 HEPCGN_14365 recG ATP-dependent DNA helicase RecG 1.00 HEPCGN_13060 recQ ATP-dependent DNA helicase RecQ low > 85
Escherichia coli ECRC98 0.99 JDDGAC_19170 recG ATP-dependent DNA helicase RecG 1.00 JDDGAC_17985 recQ ATP-dependent DNA helicase RecQ — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.94 GFF355 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.96 GFF248 ATP-dependent DNA helicase RecQ 0.59 9
Enterobacter asburiae PDN3 0.93 EX28DRAFT_3901 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.92 EX28DRAFT_4487 ATP-dependent DNA helicase RecQ low > 76
Enterobacter sp. TBS_079 0.92 MPMX20_00084 ATP-dependent DNA helicase RecG 0.92 MPMX20_04458 ATP-dependent DNA helicase RecQ low > 85
Klebsiella michiganensis M5al 0.91 BWI76_RS27440 DNA helicase RecG 0.91 BWI76_RS01245 DNA helicase RecQ low > 92
Pantoea sp. MT58 0.84 IAI47_00500 ATP-dependent DNA helicase RecG 0.81 IAI47_18360 ATP-dependent DNA helicase RecQ low > 76
Serratia liquefaciens MT49 0.84 IAI46_24905 ATP-dependent DNA helicase RecG 0.81 IAI46_00770 ATP-dependent DNA helicase RecQ 0.65 21
Pectobacterium carotovorum WPP14 0.82 HER17_RS21395 ATP-dependent DNA helicase RecG 0.82 HER17_RS01395 ATP-dependent DNA helicase RecQ low > 75
Erwinia tracheiphila SCR3 0.82 LU632_RS22190 recG ATP-dependent DNA helicase RecG 0.81 LU632_RS24095 recQ ATP-dependent DNA helicase RecQ low > 74
Dickeya dadantii 3937 0.80 DDA3937_RS00170 ATP-dependent DNA helicase RecG 0.80 DDA3937_RS19850 ATP-dependent DNA helicase RecQ low > 74
Rahnella sp. WP5 0.80 EX31_RS15820 ATP-dependent DNA helicase RecG 0.81 EX31_RS15210 ATP-dependent DNA helicase RecQ low > 89
Dickeya dianthicola 67-19 0.80 HGI48_RS21190 ATP-dependent DNA helicase RecG 0.80 HGI48_RS20005 ATP-dependent DNA helicase RecQ low > 71
Dickeya dianthicola ME23 0.80 DZA65_RS22160 ATP-dependent DNA helicase RecG 0.80 DZA65_RS21045 ATP-dependent DNA helicase RecQ low > 75
Vibrio cholerae E7946 ATCC 55056 0.66 CSW01_13680 DNA helicase RecG 0.67 CSW01_01045 DNA helicase RecQ low > 62
Shewanella amazonensis SB2B 0.65 Sama_3375 ATP-dependent DNA helicase RecG (RefSeq) 0.58 Sama_0333 ATP-dependent DNA helicase RecQ (RefSeq) low > 62
Shewanella sp. ANA-3 0.65 Shewana3_0348 ATP-dependent DNA helicase RecG (RefSeq) 0.58 Shewana3_3763 ATP-dependent DNA helicase RecQ (RefSeq) 0.51 11
Shewanella loihica PV-4 0.64 Shew_3507 ATP-dependent DNA helicase RecG (RefSeq) 0.57 Shew_3474 ATP-dependent DNA helicase RecQ (RefSeq) 0.61 9
Shewanella oneidensis MR-1 0.64 SO4364 recG ATP-dependent DNA helicase RecG (NCBI ptt file) 0.58 SO4241 recQ ATP-dependent DNA helicase RecQ (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.62 MIT1002_00111 ATP-dependent DNA helicase RecG 0.53 MIT1002_00148 ATP-dependent DNA helicase RecQ low > 70
Pseudomonas putida KT2440 0.55 PP_5310 junction-specific ATP-dependent DNA helicase 0.45 PP_4516 ATP-dependent DNA 3 low > 96
Pseudomonas stutzeri RCH2 0.55 Psest_4192 ATP-dependent DNA helicase RecG 0.44 Psest_1869 ATP-dependent DNA helicase RecQ — —
Pseudomonas fluorescens GW456-L13 0.55 PfGW456L13_772 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.45 PfGW456L13_4423 ATP-dependent DNA helicase RecQ 0.48 9
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_2105 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.45 Pf1N1B4_3533 ATP-dependent DNA helicase RecQ low > 87
Pseudomonas simiae WCS417 0.55 PS417_27870 ATP-dependent DNA helicase RecG 0.44 PS417_19950 ATP-dependent DNA helicase RecQ low > 88
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_09320 ATP-dependent DNA helicase RecG 0.44 AO353_18430 ATP-dependent DNA helicase RecQ low > 101
Pseudomonas fluorescens SBW25 0.55 PFLU_RS29550 ATP-dependent DNA helicase RecG 0.45 PFLU_RS21920 DNA helicase RecQ low > 109
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS29550 ATP-dependent DNA helicase RecG 0.45 PFLU_RS21920 DNA helicase RecQ low > 109
Marinobacter adhaerens HP15 0.54 HP15_309 DNA helicase, ATP-dependent, RecG 0.43 HP15_1718 ATP-dependent DNA helicase RecQ low > 73
Pseudomonas fluorescens FW300-N2E2 0.54 Pf6N2E2_4352 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.45 Pf6N2E2_2645 ATP-dependent DNA helicase RecQ low > 103
Pseudomonas sp. S08-1 0.54 OH686_13505 ATP-dependent DNA helicase RecG 0.43 OH686_20670 ATP-dependent DNA helicase RecQ low > 80
Pseudomonas fluorescens FW300-N2C3 0.54 AO356_12380 ATP-dependent DNA helicase RecG 0.45 AO356_04050 ATP-dependent DNA helicase RecQ low > 104
Pseudomonas sp. RS175 0.54 PFR28_04435 ATP-dependent DNA helicase RecG 0.45 PFR28_00788 ATP-dependent DNA helicase RecQ low > 88
Pseudomonas syringae pv. syringae B728a 0.54 Psyr_0201 ATP-dependent DNA helicase RecG 0.44 Psyr_3738 ATP-dependent DNA helicase RecQ low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.54 Psyr_0201 ATP-dependent DNA helicase RecG 0.44 Psyr_3738 ATP-dependent DNA helicase RecQ low > 86
Lysobacter sp. OAE881 0.53 ABIE51_RS17230 ATP-dependent DNA helicase RecG 0.41 ABIE51_RS05145 DNA helicase RecQ low > 62
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS11840 ATP-dependent DNA helicase RecG 0.44 ABZR86_RS19925 DNA helicase RecQ low > 74
Rhodanobacter denitrificans MT42 0.51 LRK55_RS11530 ATP-dependent DNA helicase RecG 0.44 LRK55_RS12700 DNA helicase RecQ low > 63
Rhodanobacter sp. FW510-T8 0.51 OKGIIK_12090 recG ATP-dependent DNA helicase RecG 0.44 OKGIIK_02375 recQ DNA helicase RecQ low > 52
Rhodanobacter denitrificans FW104-10B01 0.51 LRK54_RS11805 ATP-dependent DNA helicase RecG 0.44 LRK54_RS13000 DNA helicase RecQ low > 59
Xanthomonas campestris pv. campestris strain 8004 0.51 Xcc-8004.1204.1 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.42 Xcc-8004.1476.1 ATP-dependent DNA helicase RecQ low > 74
Burkholderia phytofirmans PsJN 0.45 BPHYT_RS03400 ATP-dependent DNA helicase RecG 0.42 BPHYT_RS18145 ATP-dependent DNA helicase RecQ low > 109
Paraburkholderia graminis OAS925 0.45 ABIE53_000833 ATP-dependent DNA helicase RecG 0.42 ABIE53_003792 ATP-dependent DNA helicase RecQ low > 113
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_04672 ATP-dependent DNA helicase RecG 0.41 H281DRAFT_06595 ATP-dependent DNA helicase RecQ — —
Paraburkholderia sabiae LMG 24235 0.45 QEN71_RS26630 ATP-dependent DNA helicase RecG 0.42 QEN71_RS28295 DNA helicase RecQ — —
Ralstonia solanacearum GMI1000 0.45 RS_RS13565 DNA helicase RecG 0.41 RS_RS15155 DNA helicase RecQ — —
Ralstonia solanacearum IBSBF1503 0.44 RALBFv3_RS05675 DNA helicase RecG 0.41 RALBFv3_RS07220 DNA helicase RecQ low > 76
Ralstonia solanacearum UW163 0.44 UW163_RS07950 DNA helicase RecG 0.41 UW163_RS06400 DNA helicase RecQ — —
Ralstonia solanacearum PSI07 0.44 RPSI07_RS11625 DNA helicase RecG 0.41 RPSI07_RS10025 DNA helicase RecQ low > 81
Cupriavidus basilensis FW507-4G11 0.44 RR42_RS17390 ATP-dependent DNA helicase RecG 0.42 RR42_RS19310 ATP-dependent DNA helicase RecQ low > 128
Ralstonia sp. UNC404CL21Col 0.44 ABZR87_RS01270 ATP-dependent DNA helicase RecG 0.42 ABZR87_RS02880 DNA helicase RecQ low > 80
Herbaspirillum seropedicae SmR1 0.44 HSERO_RS06165 ATP-dependent DNA helicase RecG 0.45 HSERO_RS02465 ATP-dependent DNA helicase RecQ 0.40 38
Acidovorax sp. GW101-3H11 0.44 Ac3H11_781 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.41 Ac3H11_3308 ATP-dependent DNA helicase RecQ low > 79
Castellaniella sp019104865 MT123 0.43 ABCV34_RS03570 ATP-dependent DNA helicase RecG 0.41 ABCV34_RS07985 DNA helicase RecQ low > 48
Hydrogenophaga sp. GW460-11-11-14-LB1 0.41 GFF2802 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.40 GFF1958 ATP-dependent DNA helicase RecQ low > 90
Dechlorosoma suillum PS 0.41 Dsui_0311 ATP-dependent DNA helicase RecG 0.44 Dsui_3092 ATP-dependent DNA helicase RecQ 0.60 23
Variovorax sp. OAS795 0.40 ABID97_RS01575 ATP-dependent DNA helicase RecG 0.43 ABID97_RS03395 DNA helicase RecQ low > 91
Variovorax sp. SCN45 0.38 GFF5538 ATP-dependent DNA helicase RecG (EC 3.6.4.12) 0.40 GFF6415 ATP-dependent DNA helicase RecQ low > 127
Rhizobium sp. OAE497 0.34 ABIE40_RS09300 ATP-dependent DNA helicase RecG 0.43 ABIE40_RS12745 DNA helicase RecQ low > 107
Agrobacterium fabrum C58 0.34 Atu1780 ATP-dependent DNA helicase 0.43 Atu0061 ATP-dependent DNA helicase low > 89
Phaeobacter inhibens DSM 17395 0.34 PGA1_c14380 ATP-dependent DNA helicase RecG 0.42 PGA1_c31900 ATP-dependent DNA helicase RecQ low > 62
Azospirillum sp. SherDot2 0.34 MPMX19_00951 ATP-dependent DNA helicase RecG 0.41 MPMX19_00123 ATP-dependent DNA helicase RecQ — —
Phocaeicola vulgatus CL09T03C04 0.34 HMPREF1058_RS08295 ATP-dependent DNA helicase RecG 0.44 HMPREF1058_RS14585 DNA helicase RecQ low > 67
Sinorhizobium meliloti 1021 0.33 SMc00228 ATP-dependent DNA helicase RecG 0.42 SMc01566 ATP-dependent DNA helicase low > 103
Phocaeicola dorei CL03T12C01 0.33 ABI39_RS02470 ATP-dependent DNA helicase RecG 0.44 ABI39_RS10235 DNA helicase RecQ low > 72
Azospirillum brasilense Sp245 0.33 AZOBR_RS09850 ATP-dependent DNA helicase RecG 0.42 AZOBR_RS02840 ATP-dependent DNA helicase RecQ 0.59 1
Magnetospirillum magneticum AMB-1 0.33 AMB_RS12400 ATP-dependent DNA helicase RecG 0.42 AMB_RS21505 DNA helicase RecQ — —
Bacteroides thetaiotaomicron VPI-5482 0.33 BT3924 ATP-dependent DNA helicase recG (NCBI ptt file) 0.41 BT1848 ATP-dependent DNA helicase recQ (NCBI ptt file) — —
Bacteroides stercoris CC31F 0.32 HMPREF1181_RS06615 ATP-dependent DNA helicase RecG 0.42 HMPREF1181_RS14110 DNA helicase RecQ low > 56
Parabacteroides merdae CL09T00C40 0.32 HMPREF1078_RS12765 ATP-dependent DNA helicase RecG 0.41 HMPREF1078_RS01195 DNA helicase RecQ — —
Dinoroseobacter shibae DFL-12 0.32 Dshi_1510 DEAD/DEAH box helicase domain protein (RefSeq) 0.41 Dshi_3334 ATP-dependent DNA helicase RecQ (RefSeq) 0.57 10
Echinicola vietnamensis KMM 6221, DSM 17526 0.32 Echvi_1162 ATP-dependent DNA helicase RecG 0.43 Echvi_0784 ATP-dependent DNA helicase RecQ low > 79
Pedobacter sp. GW460-11-11-14-LB5 0.31 CA265_RS22835 ATP-dependent DNA helicase RecG 0.37 CA265_RS08905 DNA helicase RecQ low > 88
Caulobacter crescentus NA1000 0.31 CCNA_01504 ATP-dependent DNA helicase recG 0.33 CCNA_03578 ATP-dependent DNA helicase recQ low > 66
Caulobacter crescentus NA1000 Δfur 0.31 CCNA_01504 ATP-dependent DNA helicase recG 0.33 CCNA_03578 ATP-dependent DNA helicase recQ low > 67
Pontibacter actiniarum KMM 6156, DSM 19842 0.31 CA264_15020 DNA helicase RecG 0.45 CA264_07560 DNA helicase RecQ 0.55 11
Sphingomonas koreensis DSMZ 15582 0.30 Ga0059261_0958 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.37 Ga0059261_2261 ATP-dependent DNA helicase RecQ low > 68
Rhodospirillum rubrum S1H 0.30 Rru_A1728 ATP-dependent DNA helicase RecG (NCBI) 0.40 Rru_A0089 ATP-dependent DNA helicase RecQ (NCBI) — —
Fusobacterium nucleatum SB010 0.30 HUW76_01465 ATP-dependent DNA helicase RecG 0.34 HUW76_07235 DNA helicase RecQ low > 35
Bosea sp. OAE506 0.30 ABIE41_RS15815 ATP-dependent DNA helicase RecG 0.39 ABIE41_RS04160 DNA helicase RecQ low > 77
Rhodopseudomonas palustris CGA009 0.30 TX73_013795 ATP-dependent DNA helicase RecG 0.41 TX73_025080 DNA helicase RecQ low > 86
Mucilaginibacter yixingensis YX-36 DSM 26809 0.29 ABZR88_RS17240 ATP-dependent DNA helicase RecG 0.44 ABZR88_RS20865 DNA helicase RecQ low > 71
Brevundimonas sp. GW460-12-10-14-LB2 0.28 A4249_RS04765 ATP-dependent DNA helicase RecG 0.36 A4249_RS14575 DNA helicase RecQ low > 48

Not shown: 4 genomes with orthologs for ECD_03509 only; 2 genomes with orthologs for ECD_03701 only