Conservation of cofitness between Dsui_0311 and Dsui_0707 in Dechlorosoma suillum PS

95 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dechlorosoma suillum PS 1.0 Dsui_0311 ATP-dependent DNA helicase RecG 1.0 Dsui_0707 protein RecA 0.81 12
Ralstonia solanacearum IBSBF1503 0.59 RALBFv3_RS05675 DNA helicase RecG 0.75 RALBFv3_RS12010 recombinase RecA 0.59 7
Ralstonia solanacearum UW163 0.59 UW163_RS07950 DNA helicase RecG 0.75 UW163_RS01625 recombinase RecA — —
Cupriavidus basilensis FW507-4G11 0.59 RR42_RS17390 ATP-dependent DNA helicase RecG 0.78 RR42_RS03080 recombinase RecA 0.63 3
Ralstonia sp. UNC404CL21Col 0.59 ABZR87_RS01270 ATP-dependent DNA helicase RecG 0.75 ABZR87_RS07965 recombinase RecA 0.74 1
Ralstonia solanacearum PSI07 0.58 RPSI07_RS11625 DNA helicase RecG 0.75 RPSI07_RS21260 recombinase RecA low > 81
Ralstonia solanacearum GMI1000 0.58 RS_RS13565 DNA helicase RecG 0.75 RS_RS02760 DNA recombination/repair protein RecA — —
Burkholderia phytofirmans PsJN 0.56 BPHYT_RS03400 ATP-dependent DNA helicase RecG 0.79 BPHYT_RS16360 recombinase RecA — —
Paraburkholderia sabiae LMG 24235 0.56 QEN71_RS26630 ATP-dependent DNA helicase RecG 0.81 QEN71_RS02335 recombinase RecA — —
Herbaspirillum seropedicae SmR1 0.56 HSERO_RS06165 ATP-dependent DNA helicase RecG 0.74 HSERO_RS03270 protein RecA 0.59 8
Paraburkholderia bryophila 376MFSha3.1 0.56 H281DRAFT_04672 ATP-dependent DNA helicase RecG 0.79 H281DRAFT_04208 RecA protein low > 103
Paraburkholderia graminis OAS925 0.56 ABIE53_000833 ATP-dependent DNA helicase RecG 0.79 ABIE53_003448 recombination protein RecA 0.47 12
Acidovorax sp. GW101-3H11 0.51 Ac3H11_781 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.75 Ac3H11_1255 RecA protein — —
Variovorax sp. OAS795 0.50 ABID97_RS01575 ATP-dependent DNA helicase RecG 0.75 ABID97_RS02275 recombinase RecA 0.56 10
Castellaniella sp019104865 MT123 0.49 ABCV34_RS03570 ATP-dependent DNA helicase RecG 0.77 ABCV34_RS04460 recombinase RecA low > 48
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF2802 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.73 GFF2500 RecA protein 0.75 10
Variovorax sp. SCN45 0.48 GFF5538 ATP-dependent DNA helicase RecG (EC 3.6.4.12) 0.75 GFF5390 RecA protein low > 127
Pseudomonas fluorescens FW300-N1B4 0.46 Pf1N1B4_2105 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.73 Pf1N1B4_3143 RecA protein 0.46 3
Pseudomonas stutzeri RCH2 0.46 Psest_4192 ATP-dependent DNA helicase RecG 0.75 Psest_2872 protein RecA — —
Acinetobacter radioresistens SK82 0.46 MPMX26_02732 ATP-dependent DNA helicase RecG 0.75 MPMX26_01308 Protein RecA low > 36
Pseudomonas putida KT2440 0.46 PP_5310 junction-specific ATP-dependent DNA helicase 0.75 PP_1629 Protein RecA 0.58 4
Pseudomonas fluorescens GW456-L13 0.45 PfGW456L13_772 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.73 PfGW456L13_4668 RecA protein 0.76 1
Pseudomonas fluorescens SBW25-INTG 0.45 PFLU_RS29550 ATP-dependent DNA helicase RecG 0.74 PFLU_RS05885 recombinase RecA low > 109
Lysobacter sp. OAE881 0.45 ABIE51_RS17230 ATP-dependent DNA helicase RecG 0.74 ABIE51_RS07800 recombinase RecA low > 62
Pseudomonas fluorescens SBW25 0.45 PFLU_RS29550 ATP-dependent DNA helicase RecG 0.74 PFLU_RS05885 recombinase RecA low > 109
Pseudomonas fluorescens FW300-N2E3 0.45 AO353_09320 ATP-dependent DNA helicase RecG 0.73 AO353_16805 recombinase RecA 0.58 4
Pseudomonas simiae WCS417 0.45 PS417_27870 ATP-dependent DNA helicase RecG 0.74 PS417_05815 recombinase RecA 0.46 5
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_0201 ATP-dependent DNA helicase RecG 0.74 Psyr_1378 RecA protein 0.35 54
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_0201 ATP-dependent DNA helicase RecG 0.74 Psyr_1378 RecA protein 0.44 18
Pseudomonas sp. S08-1 0.45 OH686_13505 ATP-dependent DNA helicase RecG 0.73 OH686_18205 protein RecA low > 80
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_12380 ATP-dependent DNA helicase RecG 0.73 AO356_05670 recombinase RecA 0.59 3
Pseudomonas sp. RS175 0.45 PFR28_04435 ATP-dependent DNA helicase RecG 0.73 PFR28_00472 Protein RecA low > 88
Pseudomonas fluorescens FW300-N2E2 0.45 Pf6N2E2_4352 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.73 Pf6N2E2_2993 RecA protein — —
Dyella japonica UNC79MFTsu3.2 0.44 ABZR86_RS11840 ATP-dependent DNA helicase RecG 0.78 ABZR86_RS00660 recombinase RecA 0.70 32
Shewanella loihica PV-4 0.44 Shew_3507 ATP-dependent DNA helicase RecG (RefSeq) 0.71 Shew_1215 recA recombinase A (RefSeq) low > 60
Shewanella sp. ANA-3 0.44 Shewana3_0348 ATP-dependent DNA helicase RecG (RefSeq) 0.73 Shewana3_1126 recA recombinase A (RefSeq) 0.41 65
Rhodanobacter denitrificans FW104-10B01 0.44 LRK54_RS11805 ATP-dependent DNA helicase RecG 0.81 LRK54_RS14980 recombinase RecA 0.38 49
Rhodanobacter denitrificans MT42 0.44 LRK55_RS11530 ATP-dependent DNA helicase RecG 0.81 LRK55_RS14695 recombinase RecA low > 63
Alteromonas macleodii MIT1002 0.43 MIT1002_00111 ATP-dependent DNA helicase RecG 0.77 MIT1002_00955 Recombinase A low > 70
Shewanella oneidensis MR-1 0.43 SO4364 recG ATP-dependent DNA helicase RecG (NCBI ptt file) 0.74 SO3430 recA recA protein (NCBI ptt file) low > 76
Escherichia coli ECRC101 0.43 OKFHMN_15545 recG ATP-dependent DNA helicase RecG 0.73 OKFHMN_20705 recA recombinase RecA — —
Escherichia coli ECRC98 0.43 JDDGAC_19170 recG ATP-dependent DNA helicase RecG 0.73 JDDGAC_24370 recA recombinase RecA — —
Escherichia coli ECRC102 0.43 NIAGMN_13305 recG ATP-dependent DNA helicase RecG 0.73 NIAGMN_18475 recA recombinase RecA — —
Escherichia coli ECRC99 0.43 KEDOAH_12600 recG ATP-dependent DNA helicase RecG 0.73 KEDOAH_07430 recA recombinase RecA — —
Escherichia coli ECRC101 0.43 MCAODC_06055 recG ATP-dependent DNA helicase RecG 0.73 MCAODC_11230 recA recombinase RecA — —
Rhodanobacter sp. FW510-T8 0.43 OKGIIK_12090 recG ATP-dependent DNA helicase RecG 0.81 OKGIIK_03740 recA recombinase RecA low > 52
Escherichia coli ECOR38 0.43 HEPCGN_14365 recG ATP-dependent DNA helicase RecG 0.73 HEPCGN_19900 recA recombinase RecA low > 85
Rahnella sp. WP5 0.43 EX31_RS15820 ATP-dependent DNA helicase RecG 0.72 EX31_RS07800 recombinase RecA low > 89
Pantoea sp. MT58 0.43 IAI47_00500 ATP-dependent DNA helicase RecG 0.72 IAI47_04300 recombinase RecA 0.58 11
Escherichia coli Nissle 1917 0.43 ECOLIN_RS20800 ATP-dependent DNA helicase RecG 0.73 ECOLIN_RS15060 recombinase RecA — —
Shewanella amazonensis SB2B 0.43 Sama_3375 ATP-dependent DNA helicase RecG (RefSeq) 0.71 Sama_1046 recA recombinase A (RefSeq) low > 62
Escherichia fergusonii Becca 0.43 EFB2_00136 ATP-dependent DNA helicase RecG 0.73 EFB2_01225 Protein RecA low > 86
Marinobacter adhaerens HP15 0.43 HP15_309 DNA helicase, ATP-dependent, RecG 0.74 HP15_1048 recombinase A low > 73
Escherichia coli ECRC62 0.43 BNILDI_04090 recG ATP-dependent DNA helicase RecG 0.73 BNILDI_11105 recA recombinase RecA — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.43 OHPLBJKB_00049 ATP-dependent DNA helicase RecG 0.73 OHPLBJKB_01035 Protein RecA low > 73
Kangiella aquimarina DSM 16071 0.43 B158DRAFT_0566 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.78 B158DRAFT_1531 protein RecA low > 40
Escherichia coli BW25113 0.42 b3652 recG ATP-dependent DNA helicase (NCBI) 0.73 b2699 recA recombinase A (NCBI) low > 76
Escherichia coli BL21 0.42 ECD_03509 ATP-dependent DNA helicase 0.73 ECD_02549 DNA recombination and repair protein; ssDNA-dependent ATPase; synaptase; ssDNA and dsDNA binding protein; ATP-dependent homologous DNA strand exchanger; recombinase A; LexA autocleavage cofactor low > 60
Escherichia coli ECOR27 0.42 NOLOHH_07425 recG ATP-dependent DNA helicase RecG 0.73 NOLOHH_12545 recA recombinase RecA — —
Dickeya dianthicola ME23 0.42 DZA65_RS22160 ATP-dependent DNA helicase RecG 0.72 DZA65_RS17450 recombinase RecA — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.42 GFF355 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.73 GFF4693 RecA protein — —
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.1204.1 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.74 Xcc-8004.3111.1 RecA protein — —
Erwinia tracheiphila SCR3 0.42 LU632_RS22190 recG ATP-dependent DNA helicase RecG 0.73 LU632_RS15735 recA recombinase RecA low > 74
Dickeya dadantii 3937 0.42 DDA3937_RS00170 ATP-dependent DNA helicase RecG 0.73 DDA3937_RS16245 recombinase RecA low > 74
Dickeya dianthicola 67-19 0.42 HGI48_RS21190 ATP-dependent DNA helicase RecG 0.72 HGI48_RS16355 recombinase RecA low > 71
Enterobacter sp. TBS_079 0.42 MPMX20_00084 ATP-dependent DNA helicase RecG 0.72 MPMX20_03580 Protein RecA 0.40 26
Serratia liquefaciens MT49 0.41 IAI46_24905 ATP-dependent DNA helicase RecG 0.72 IAI46_03840 recombinase RecA 0.74 10
Pectobacterium carotovorum WPP14 0.41 HER17_RS21395 ATP-dependent DNA helicase RecG 0.73 HER17_RS05045 recombinase RecA low > 75
Enterobacter asburiae PDN3 0.41 EX28DRAFT_3901 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.72 EX28DRAFT_2785 protein RecA — —
Klebsiella michiganensis M5al 0.41 BWI76_RS27440 DNA helicase RecG 0.73 BWI76_RS22180 recombinase RecA — —
Vibrio cholerae E7946 ATCC 55056 0.41 CSW01_13680 DNA helicase RecG 0.73 CSW01_02875 DNA recombination/repair protein RecA 0.58 40
Agrobacterium fabrum C58 0.34 Atu1780 ATP-dependent DNA helicase 0.71 Atu1874 RecA protein 0.62 2
Rhizobium sp. OAE497 0.34 ABIE40_RS09300 ATP-dependent DNA helicase RecG 0.71 ABIE40_RS10320 recombinase RecA low > 107
Caulobacter crescentus NA1000 Δfur 0.34 CCNA_01504 ATP-dependent DNA helicase recG 0.68 CCNA_01141 RecA protein — —
Caulobacter crescentus NA1000 0.34 CCNA_01504 ATP-dependent DNA helicase recG 0.68 CCNA_01141 RecA protein low > 66
Sinorhizobium meliloti 1021 0.33 SMc00228 ATP-dependent DNA helicase RecG 0.70 SMc00760 recombinase A 0.55 18
Phocaeicola vulgatus CL09T03C04 0.33 HMPREF1058_RS08295 ATP-dependent DNA helicase RecG 0.64 HMPREF1058_RS15965 recombinase RecA low > 67
Magnetospirillum magneticum AMB-1 0.33 AMB_RS12400 ATP-dependent DNA helicase RecG 0.72 AMB_RS03205 DNA recombination/repair protein RecA — —
Azospirillum sp. SherDot2 0.33 MPMX19_00951 ATP-dependent DNA helicase RecG 0.71 MPMX19_00869 Protein RecA — —
Phocaeicola dorei CL03T12C01 0.33 ABI39_RS02470 ATP-dependent DNA helicase RecG 0.64 ABI39_RS11930 recombinase RecA low > 72
Synechococcus elongatus PCC 7942 0.33 Synpcc7942_1079 recG ATP-dependent DNA helicase RecG 0.58 Synpcc7942_0348 recA recombinase A — —
Azospirillum brasilense Sp245 0.33 AZOBR_RS09850 ATP-dependent DNA helicase RecG 0.72 AZOBR_RS11095 recombinase RecA 0.36 36
Parabacteroides merdae CL09T00C40 0.33 HMPREF1078_RS12765 ATP-dependent DNA helicase RecG 0.63 HMPREF1078_RS00095 recombinase RecA — —
Dinoroseobacter shibae DFL-12 0.32 Dshi_1510 DEAD/DEAH box helicase domain protein (RefSeq) 0.65 Dshi_1643 recA protein (RefSeq) 0.39 18
Bacteroides stercoris CC31F 0.32 HMPREF1181_RS06615 ATP-dependent DNA helicase RecG 0.63 HMPREF1181_RS11910 recombinase RecA low > 56
Bacteroides thetaiotaomicron VPI-5482 0.32 BT3924 ATP-dependent DNA helicase recG (NCBI ptt file) 0.62 BT4610 RecA (NCBI ptt file) — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.32 Echvi_1162 ATP-dependent DNA helicase RecG 0.61 Echvi_0044 protein RecA 0.52 24
Phaeobacter inhibens DSM 17395 0.32 PGA1_c14380 ATP-dependent DNA helicase RecG 0.71 PGA1_c15260 protein recA (recombinase A) 0.48 9
Pontibacter actiniarum KMM 6156, DSM 19842 0.32 CA264_15020 DNA helicase RecG 0.65 CA264_19695 DNA recombination/repair protein RecA — —
Brevundimonas sp. GW460-12-10-14-LB2 0.31 A4249_RS04765 ATP-dependent DNA helicase RecG 0.71 A4249_RS12615 recombinase RecA low > 48
Mucilaginibacter yixingensis YX-36 DSM 26809 0.31 ABZR88_RS17240 ATP-dependent DNA helicase RecG 0.64 ABZR88_RS16740 recombinase RecA low > 71
Bosea sp. OAE506 0.31 ABIE41_RS15815 ATP-dependent DNA helicase RecG 0.68 ABIE41_RS13335 recombinase RecA 0.60 2
Rhodopseudomonas palustris CGA009 0.30 TX73_013795 ATP-dependent DNA helicase RecG 0.72 TX73_019940 recombinase RecA — —
Fusobacterium nucleatum SB010 0.30 HUW76_01465 ATP-dependent DNA helicase RecG 0.57 HUW76_07355 recombinase RecA 0.98 22
Rhodospirillum rubrum S1H 0.30 Rru_A1728 ATP-dependent DNA helicase RecG (NCBI) 0.70 Rru_A2819 RecA DNA recombination protein (NCBI) — —
Pedobacter sp. GW460-11-11-14-LB5 0.30 CA265_RS22835 ATP-dependent DNA helicase RecG 0.63 CA265_RS00600 recombinase RecA 0.60 13

Not shown: 1 genomes with orthologs for Dsui_0311 only; 5 genomes with orthologs for Dsui_0707 only