Conservation of cofitness between DZA65_RS19385 and DZA65_RS15995 in Dickeya dianthicola ME23

92 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola ME23 1.0 DZA65_RS19385 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 1.0 DZA65_RS15995 5-(carboxyamino)imidazole ribonucleotide synthase 0.77 20
Dickeya dianthicola 67-19 1.00 HGI48_RS18245 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 1.00 HGI48_RS15190 5-(carboxyamino)imidazole ribonucleotide synthase 0.72 26
Dickeya dadantii 3937 0.95 DDA3937_RS18310 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.93 DDA3937_RS15110 5-(carboxyamino)imidazole ribonucleotide synthase 0.90 8
Pectobacterium carotovorum WPP14 0.93 HER17_RS02895 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.83 HER17_RS06470 5-(carboxyamino)imidazole ribonucleotide synthase 0.95 19
Rahnella sp. WP5 0.91 EX31_RS03835 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.80 EX31_RS22620 5-(carboxyamino)imidazole ribonucleotide synthase 0.89 64
Klebsiella michiganensis M5al 0.89 BWI76_RS04465 carbamoyl-phosphate synthase small subunit 0.80 BWI76_RS07065 5-(carboxyamino)imidazole ribonucleotide synthase 0.59 12
Enterobacter asburiae PDN3 0.88 EX28DRAFT_3637 carbamoyl-phosphate synthase, small subunit 0.77 EX28DRAFT_2460 phosphoribosylaminoimidazole carboxylase, PurK protein
Escherichia coli HS(pFamp)R (ATCC 700891) 0.88 OHPLBJKB_03625 Carbamoyl-phosphate synthase small chain 0.77 OHPLBJKB_03159 N5-carboxyaminoimidazole ribonucleotide synthase low > 73
Serratia liquefaciens MT49 0.88 IAI46_03190 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.80 IAI46_05370 5-(carboxyamino)imidazole ribonucleotide synthase 0.71 38
Escherichia coli BW25113 0.88 b0032 carA carbamoyl-phosphate synthase small subunit (NCBI) 0.77 b0522 purK phosphoribosylaminoimidazole carboxylase (NCBI) 0.84 36
Escherichia coli BL21 0.88 ECD_00036 carbamoyl phosphate synthetase small subunit, glutamine amidotransferase 0.78 ECD_00472 N5-carboxyaminoimidazole ribonucleotide synthase 0.80 11
Escherichia coli ECRC62 0.88 BNILDI_08325 carA carbamoyl phosphate synthase small subunit 0.77 BNILDI_22260 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.92 21
Escherichia coli ECOR27 0.88 NOLOHH_03275 carA carbamoyl phosphate synthase small subunit 0.77 NOLOHH_00830 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.92 17
Escherichia coli ECRC100 0.88 OKFHMN_10945 carA carbamoyl phosphate synthase small subunit 0.77 OKFHMN_07840 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.83 67
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.88 GFF214 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.78 GFF4438 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) low > 78
Escherichia coli ECRC101 0.88 MCAODC_01460 carA carbamoyl phosphate synthase small subunit 0.77 MCAODC_27060 purK 5-(carboxyamino)imidazole ribonucleotide synthase low > 87
Escherichia coli ECRC102 0.88 NIAGMN_08795 carA carbamoyl phosphate synthase small subunit 0.77 NIAGMN_05895 purK 5-(carboxyamino)imidazole ribonucleotide synthase
Escherichia coli ECRC99 0.88 KEDOAH_17210 carA carbamoyl phosphate synthase small subunit 0.77 KEDOAH_20130 purK 5-(carboxyamino)imidazole ribonucleotide synthase
Escherichia coli ECRC98 0.88 JDDGAC_14540 carA carbamoyl phosphate synthase small subunit 0.77 JDDGAC_11490 purK 5-(carboxyamino)imidazole ribonucleotide synthase low > 86
Escherichia coli ECOR38 0.88 HEPCGN_08930 carA carbamoyl phosphate synthase small subunit 0.77 HEPCGN_06480 purK 5-(carboxyamino)imidazole ribonucleotide synthase low > 87
Escherichia coli Nissle 1917 0.88 ECOLIN_RS00175 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.78 ECOLIN_RS03025 5-(carboxyamino)imidazole ribonucleotide synthase low > 55
Escherichia fergusonii Becca 0.88 EFB2_04013 Carbamoyl-phosphate synthase small chain 0.78 EFB2_03540 N5-carboxyaminoimidazole ribonucleotide synthase low > 86
Enterobacter sp. TBS_079 0.85 MPMX20_00739 Carbamoyl-phosphate synthase small chain 0.76 MPMX20_01097 N5-carboxyaminoimidazole ribonucleotide synthase 0.82 43
Pantoea sp. MT58 0.84 IAI47_16120 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.78 IAI47_14355 5-(carboxyamino)imidazole ribonucleotide synthase 0.83 58
Erwinia tracheiphila SCR3 0.84 LU632_RS02755 carA glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.76 LU632_RS15250 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.81 14
Vibrio cholerae E7946 ATCC 55056 0.82 CSW01_12105 carbamoyl-phosphate synthase small subunit 0.32 CSW01_00260 5-(carboxyamino)imidazole ribonucleotide synthase 0.62 12
Shewanella amazonensis SB2B 0.79 Sama_2504 carbamoyl phosphate synthase small subunit (RefSeq) 0.50 Sama_1063 phosphoribosylaminoimidazole carboxylase ATPase subunit (RefSeq) 0.79 17
Shewanella loihica PV-4 0.78 Shew_2839 carbamoyl phosphate synthase small subunit (RefSeq) 0.27 Shew_1249 phosphoribosylaminoimidazole carboxylase, ATPase subunit (RefSeq) low > 60
Shewanella oneidensis MR-1 0.76 SO1141 carA carbamoyl-phosphate synthase, small subunit (NCBI ptt file) 0.51 SO3555 purK phosphoribosylaminoimidazole carboxylase, ATPase subunit (NCBI ptt file) 0.92 6
Shewanella sp. ANA-3 0.74 Shewana3_0967 carbamoyl phosphate synthase small subunit (RefSeq) 0.51 Shewana3_3156 phosphoribosylaminoimidazole carboxylase ATPase subunit (RefSeq) 0.90 49
Kangiella aquimarina DSM 16071 0.73 B158DRAFT_0615 carbamoyl-phosphate synthase, small subunit 0.28 B158DRAFT_0610 5-(carboxyamino)imidazole ribonucleotide synthase
Alteromonas macleodii MIT1002 0.72 MIT1002_01466 Carbamoyl-phosphate synthase small chain 0.32 MIT1002_00522 N5-carboxyaminoimidazole ribonucleotide synthase 0.99 8
Pseudomonas stutzeri RCH2 0.71 Psest_0967 carbamoyl-phosphate synthase, small subunit 0.29 Psest_4068 phosphoribosylaminoimidazole carboxylase, PurK protein
Pseudomonas fluorescens FW300-N2E3 0.71 AO353_05635 carbamoyl phosphate synthase small subunit 0.28 AO353_09935 phosphoribosylaminoimidazole carboxylase
Pseudomonas sp. S08-1 0.71 OH686_17075 Carbamoyl-phosphate synthase small chain 0.27 OH686_13380 N5-carboxyaminoimidazole ribonucleotide synthase
Pseudomonas fluorescens GW456-L13 0.71 PfGW456L13_5100 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.27 PfGW456L13_747 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
Pseudomonas fluorescens FW300-N2E2 0.71 Pf6N2E2_3365 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.29 Pf6N2E2_4081 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
Pseudomonas fluorescens FW300-N2C3 0.71 AO356_07485 carbamoyl phosphate synthase small subunit 0.28 AO356_11075 phosphoribosylaminoimidazole carboxylase
Pseudomonas fluorescens FW300-N1B4 0.71 Pf1N1B4_1173 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.27 Pf1N1B4_2028 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
Pseudomonas syringae pv. syringae B728a ΔmexB 0.70 Psyr_4192 carbamoyl-phosphate synthase small subunit 0.28 Psyr_5047 5-(carboxyamino)imidazole ribonucleotide synthase
Pseudomonas putida KT2440 0.70 PP_4724 Carbamoyl-phosphate synthase small chain 0.29 PP_5335 N5-carboxyaminoimidazole ribonucleotide synthase
Pseudomonas syringae pv. syringae B728a 0.70 Psyr_4192 carbamoyl-phosphate synthase small subunit 0.28 Psyr_5047 5-(carboxyamino)imidazole ribonucleotide synthase
Pseudomonas simiae WCS417 0.70 PS417_24045 carbamoyl phosphate synthase small subunit 0.28 PS417_28115 phosphoribosylaminoimidazole carboxylase
Pseudomonas fluorescens SBW25 0.70 PFLU_RS25885 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.27 PFLU_RS29800 5-(carboxyamino)imidazole ribonucleotide synthase
Pseudomonas sp. RS175 0.70 PFR28_00076 Carbamoyl-phosphate synthase small chain 0.29 PFR28_04495 N5-carboxyaminoimidazole ribonucleotide synthase
Marinobacter adhaerens HP15 0.70 HP15_3078 carbamoyl-phosphate synthase small chain 0.28 HP15_2350 phosphoribosylaminoimidazole carboxylase ATPase subunit
Pseudomonas fluorescens SBW25-INTG 0.70 PFLU_RS25885 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.27 PFLU_RS29800 5-(carboxyamino)imidazole ribonucleotide synthase
Dechlorosoma suillum PS 0.68 Dsui_3065 carbamoyl-phosphate synthase, small subunit 0.18 Dsui_0091 phosphoribosylaminoimidazole carboxylase, PurK protein
Acinetobacter radioresistens SK82 0.68 MPMX26_00767 Carbamoyl-phosphate synthase small chain 0.28 MPMX26_03050 N5-carboxyaminoimidazole ribonucleotide synthase low > 36
Herbaspirillum seropedicae SmR1 0.65 HSERO_RS06920 carbamoyl phosphate synthase small subunit 0.21 HSERO_RS03370 phosphoribosylaminoimidazole carboxylase
Cupriavidus basilensis FW507-4G11 0.65 RR42_RS13520 carbamoyl phosphate synthase small subunit 0.17 RR42_RS03230 phosphoribosylaminoimidazole carboxylase
Rhodanobacter denitrificans MT42 0.65 LRK55_RS17850 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.24 LRK55_RS13530 5-(carboxyamino)imidazole ribonucleotide synthase
Lysobacter sp. OAE881 0.65 ABIE51_RS11625 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.23 ABIE51_RS15390 5-(carboxyamino)imidazole ribonucleotide synthase low > 62
Xanthomonas campestris pv. campestris strain 8004 0.65 Xcc-8004.2914.1 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.25 Xcc-8004.2012.1 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
Rhodanobacter denitrificans FW104-10B01 0.64 LRK54_RS17995 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.24 LRK54_RS13815 5-(carboxyamino)imidazole ribonucleotide synthase
Ralstonia sp. UNC404CL21Col 0.64 ABZR87_RS14150 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.16 ABZR87_RS08090 5-(carboxyamino)imidazole ribonucleotide synthase
Dyella japonica UNC79MFTsu3.2 0.64 ABZR86_RS05605 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.23 ABZR86_RS09830 5-(carboxyamino)imidazole ribonucleotide synthase
Acidovorax sp. GW101-3H11 0.64 Ac3H11_435 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.20 Ac3H11_675 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
Ralstonia solanacearum PSI07 0.64 RPSI07_RS15245 carbamoyl-phosphate synthase small subunit 0.15 RPSI07_RS21130 5-(carboxyamino)imidazole ribonucleotide synthase
Ralstonia solanacearum UW163 0.64 UW163_RS15510 carbamoyl-phosphate synthase small subunit 0.16 UW163_RS01410 5-(carboxyamino)imidazole ribonucleotide synthase
Ralstonia solanacearum IBSBF1503 0.64 RALBFv3_RS02200 carbamoyl-phosphate synthase small subunit 0.16 RALBFv3_RS12200 5-(carboxyamino)imidazole ribonucleotide synthase
Paraburkholderia sabiae LMG 24235 0.64 QEN71_RS04775 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.18 QEN71_RS02450 5-(carboxyamino)imidazole ribonucleotide synthase
Rhodanobacter sp. FW510-T8 0.64 OKGIIK_07300 carbamoyl phosphate synthase small subunit 0.25 OKGIIK_03050 purK 5-(carboxyamino)imidazole ribonucleotide synthase
Ralstonia solanacearum GMI1000 0.63 RS_RS07620 carbamoyl-phosphate synthase small subunit 0.16 RS_RS02885 5-(carboxyamino)imidazole ribonucleotide synthase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.63 GFF4899 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.24 GFF2770 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
Variovorax sp. SCN45 0.63 GFF377 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.21 GFF5513 N5-carboxyaminoimidazole ribonucleotide synthase (EC 6.3.4.18)
Variovorax sp. OAS795 0.63 ABID97_RS17090 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.20 ABID97_RS01700 5-(carboxyamino)imidazole ribonucleotide synthase
Paraburkholderia bryophila 376MFSha3.1 0.62 H281DRAFT_04402 carbamoyl-phosphate synthase small subunit 0.20 H281DRAFT_04185 5-(carboxyamino)imidazole ribonucleotide synthase
Burkholderia phytofirmans PsJN 0.62 BPHYT_RS14195 carbamoyl phosphate synthase small subunit 0.20 BPHYT_RS16245 phosphoribosylaminoimidazole carboxylase 0.65 19
Paraburkholderia graminis OAS925 0.62 ABIE53_003005 carbamoyl-phosphate synthase small subunit 0.20 ABIE53_003423 5-(carboxyamino)imidazole ribonucleotide synthase
Castellaniella sp019104865 MT123 0.59 ABCV34_RS15505 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.18 ABCV34_RS00565 5-(carboxyamino)imidazole ribonucleotide synthase
Azospirillum brasilense Sp245 0.51 AZOBR_RS10920 carbamoyl phosphate synthase small subunit 0.25 AZOBR_RS06140 phosphoribosylaminoimidazole carboxylase
Azospirillum sp. SherDot2 0.51 MPMX19_00757 Carbamoyl-phosphate synthase small chain 0.24 MPMX19_01418 N5-carboxyaminoimidazole ribonucleotide synthase
Magnetospirillum magneticum AMB-1 0.51 AMB_RS03600 carbamoyl-phosphate synthase small subunit 0.23 AMB_RS11140 5-(carboxyamino)imidazole ribonucleotide synthase
Rhodospirillum rubrum S1H 0.48 Rru_A2885 Carbamoyl-phosphate synthase, small subunit (NCBI) 0.21 Rru_A1051 Phosphoribosylaminoimidazole carboxylase, ATPase subunit (NCBI) low > 58
Rhodopseudomonas palustris CGA009 0.48 TX73_006555 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.27 TX73_021645 5-(carboxyamino)imidazole ribonucleotide synthase
Phaeobacter inhibens DSM 17395 0.48 PGA1_c06670 carbamoyl-phosphate synthase small chain 0.23 PGA1_c24870 phosphoribosylaminoimidazole carboxylase ATPase subunit PurK 0.70 27
Sphingomonas koreensis DSMZ 15582 0.47 Ga0059261_4243 carbamoyl-phosphate synthase, small subunit 0.22 Ga0059261_1428 5-(carboxyamino)imidazole ribonucleotide synthase
Sinorhizobium meliloti 1021 0.47 SMc01569 carbamoyl phosphate synthase small subunit 0.24 SMc04002 phosphoribosylaminoimidazole carboxylase ATPase subunit 0.69 17
Brevundimonas sp. GW460-12-10-14-LB2 0.47 A4249_RS16140 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.22 A4249_RS08935 5-(carboxyamino)imidazole ribonucleotide synthase
Dinoroseobacter shibae DFL-12 0.47 Dshi_2387 carbamoyl-phosphate synthase, small subunit (RefSeq) 0.24 Dshi_0680 phosphoribosylaminoimidazole carboxylase, ATPase subunit (RefSeq)
Bosea sp. OAE506 0.47 ABIE41_RS11975 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.23 ABIE41_RS09245 5-(carboxyamino)imidazole ribonucleotide synthase
Rhizobium sp. OAE497 0.45 ABIE40_RS12765 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.22 ABIE40_RS16070 5-(carboxyamino)imidazole ribonucleotide synthase
Agrobacterium fabrum C58 0.45 Atu2170 carbamoylphosphate synthase small chain 0.23 Atu3755 phosphoribosylaminoimidazole carboxylase ATPase subunit
Caulobacter crescentus NA1000 0.45 CCNA_02925 carbamoyl-phosphate synthase small chain 0.24 CCNA_03392 phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit
Caulobacter crescentus NA1000 Δfur 0.45 CCNA_02925 carbamoyl-phosphate synthase small chain 0.24 CCNA_03392 phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit low > 67
Synechococcus elongatus PCC 7942 0.45 Synpcc7942_2122 carA carbamoyl phosphate synthase small subunit 0.20 Synpcc7942_1428 purK phosphoribosylaminoimidazole carboxylase ATPase subunit
Pedobacter sp. GW460-11-11-14-LB5 0.40 CA265_RS15240 carbamoyl phosphate synthase small subunit 0.20 CA265_RS07745 5-(carboxyamino)imidazole ribonucleotide synthase
Pontibacter actiniarum KMM 6156, DSM 19842 0.39 CA264_19490 carbamoyl phosphate synthase small subunit 0.18 CA264_12600 5-(carboxyamino)imidazole ribonucleotide synthase low > 74
Mucilaginibacter yixingensis YX-36 DSM 26809 0.39 ABZR88_RS17830 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.17 ABZR88_RS09290 5-(carboxyamino)imidazole ribonucleotide synthase
Bifidobacterium breve UCC2003 0.39 BBR_RS13630 carbamoyl-phosphate synthase small subunit 0.19 BBR_RS13300 5-(carboxyamino)imidazole ribonucleotide synthase low > 34
Echinicola vietnamensis KMM 6221, DSM 17526 0.38 Echvi_0226 carbamoyl-phosphate synthase, small subunit 0.17 Echvi_0884 phosphoribosylaminoimidazole carboxylase, PurK protein
Mycobacterium tuberculosis H37Rv 0.36 Rv1383 Probable carbamoyl-phosphate synthase small chain CarA (carbamoyl-phosphate synthetase glutamine chain) 0.19 Rv3276c Probable phosphoribosylaminoimidazole carboxylase ATPase subunit PurK (air carboxylase) (AIRC)

Not shown: 11 genomes with orthologs for DZA65_RS19385 only; 0 genomes with orthologs for DZA65_RS15995 only