Conservation of cofitness between CSW01_11965 and CSW01_14940 in Vibrio cholerae E7946 ATCC 55056

99 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_11965 threonine synthase 1.0 CSW01_14940 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase 0.52 6
Rahnella sp. WP5 0.69 EX31_RS03935 threonine synthase 0.42 EX31_RS08845 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 89
Klebsiella pneumoniae MKP103 0.68 KDGMDA_12520 threonine synthase 0.41 KDGMDA_11010 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 95
Dickeya dianthicola 67-19 0.68 HGI48_RS18335 threonine synthase 0.39 HGI48_RS18570 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 71
Klebsiella michiganensis M5al 0.68 BWI76_RS04255 threonine synthase 0.41 BWI76_RS02510 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 92
Dickeya dianthicola ME23 0.68 DZA65_RS19475 threonine synthase 0.37 DZA65_RS19705 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 75
Dickeya dadantii 3937 0.68 DDA3937_RS18405 threonine synthase 0.35 DDA3937_RS18635 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 74
Pantoea sp. MT58 0.68 IAI47_16205 threonine synthase 0.38 IAI47_02565 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 76
Enterobacter asburiae PDN3 0.68 EX28DRAFT_3616 threonine synthase 0.42 EX28DRAFT_3364 yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region low > 76
Erwinia amylovora T8 0.68 OLJFJH_01485 threonine synthase 0.37 OLJFJH_02525 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 58
Pantoea agglomerans CFBP13505 P0401 0.68 PagCFBP13505_RS21900 threonine synthase 0.38 PagCFBP13505_RS11160 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 74
Serratia liquefaciens MT49 0.68 IAI46_03040 threonine synthase 0.41 IAI46_01600 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 87
Enterobacter sp. TBS_079 0.68 MPMX20_00712 Threonine synthase 0.42 MPMX20_00448 Bifunctional NAD(P)H-hydrate repair enzyme Nnr low > 85
Erwinia tracheiphila SCR3 0.67 LU632_RS02620 thrC threonine synthase 0.40 LU632_RS02030 nnr bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase
Pectobacterium carotovorum WPP14 0.67 HER17_RS02805 threonine synthase 0.39 HER17_RS02560 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 75
Escherichia coli Nissle 1917 0.66 ECOLIN_RS00020 threonine synthase 0.40 ECOLIN_RS24205 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 55
Escherichia coli ECOR38 0.66 HEPCGN_09105 thrC threonine synthase 0.40 HEPCGN_10510 nnr bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 88
Escherichia coli BL21 0.66 ECD_00004 L-threonine synthase 0.40 ECD_04034 bifunctional NAD(P)H-hydrate repair enzyme; C-terminal domain ADP-dependent (S)-NAD(P)H-hydrate dehydratase and N-terminal domain NAD(P)H-hydrate epimerase low > 61
Escherichia coli ECRC100 0.66 OKFHMN_11100 thrC threonine synthase 0.40 OKFHMN_12280 nnr bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 79
Escherichia fergusonii Becca 0.66 EFB2_04039 Threonine synthase 0.40 EFB2_04368 Bifunctional NAD(P)H-hydrate repair enzyme Nnr low > 86
Escherichia coli ECRC98 0.66 JDDGAC_14695 thrC threonine synthase 0.40 JDDGAC_15920 nnr bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 87
Escherichia coli BW25113 0.66 b0004 thrC threonine synthase (NCBI) 0.40 b4167 yjeF predicted carbohydrate kinase (NCBI) low > 76
Escherichia coli ECRC99 0.66 KEDOAH_17055 thrC threonine synthase 0.40 KEDOAH_15875 nnr bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase
Escherichia coli ECRC101 0.66 MCAODC_01615 thrC threonine synthase 0.40 MCAODC_02795 nnr bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 87
Escherichia coli ECRC102 0.66 NIAGMN_08950 thrC threonine synthase 0.40 NIAGMN_10130 nnr bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 80
Escherichia coli ECOR27 0.66 NOLOHH_03430 thrC threonine synthase 0.40 NOLOHH_04545 nnr bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 76
Escherichia coli ECRC62 0.66 BNILDI_08170 thrC threonine synthase 0.40 BNILDI_06945 nnr bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.66 OHPLBJKB_03656 Threonine synthase 0.40 OHPLBJKB_03875 Bifunctional NAD(P)H-hydrate repair enzyme Nnr low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.66 GFF1080 Threonine synthase (EC 4.2.3.1) 0.41 GFF820 NAD(P)HX epimerase / NAD(P)HX dehydratase low > 78
Alteromonas macleodii MIT1002 0.62 MIT1002_03084 Threonine synthase 0.36 MIT1002_03793 Nicotinamide nucleotide repair protein low > 70
Shewanella sp. ANA-3 0.60 Shewana3_1141 threonine synthase (RefSeq) 0.34 Shewana3_0592 carbohydrate kinase, YjeF related protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.59 SO3413 thrC threonine synthase (NCBI ptt file) 0.34 SO0598 yjeF yjeF protein (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.58 Shew_1081 threonine synthase (RefSeq) 0.31 Shew_0561 carbohydrate kinase, YjeF-related protein (RefSeq) low > 60
Shewanella amazonensis SB2B 0.58 Sama_0907 threonine synthase (RefSeq) 0.32 Sama_3030 YjeF protein (RefSeq) low > 62
Bacteroides stercoris CC31F 0.43 HMPREF1181_RS00050 threonine synthase 0.21 HMPREF1181_RS06260 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 56
Phocaeicola vulgatus CL09T03C04 0.42 HMPREF1058_RS14730 threonine synthase 0.21 HMPREF1058_RS00705 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 67
Bacteroides thetaiotaomicron VPI-5482 0.42 BT2401 threonine synthase (NCBI ptt file) 0.21 BT4383 putative sugar kinase (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.42 BACOVA_03023 threonine synthase 0.20 BACOVA_05215 YjeF domain protein low > 96
Phocaeicola dorei CL03T12C01 0.42 ABI39_RS10440 threonine synthase 0.21 ABI39_RS08310 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 72
Parabacteroides merdae CL09T00C40 0.41 HMPREF1078_RS10395 threonine synthase 0.18 HMPREF1078_RS15325 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 61
Pedobacter sp. GW460-11-11-14-LB5 0.41 CA265_RS23465 threonine synthase 0.18 CA265_RS24885 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 88
Echinicola vietnamensis KMM 6221, DSM 17526 0.40 Echvi_2002 threonine synthase 0.20 Echvi_0073 yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region low > 79
Mucilaginibacter yixingensis YX-36 DSM 26809 0.39 ABZR88_RS18960 threonine synthase 0.17 ABZR88_RS18865 NAD(P)H-hydrate dehydratase
Cellulophaga baltica 18 0.39 M666_RS11605 threonine synthase 0.20 M666_RS11630 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 67
Lysobacter sp. OAE881 0.31 ABIE51_RS17530 threonine synthase 0.31 ABIE51_RS08050 NAD(P)H-hydrate dehydratase low > 62
Rhizobium sp. OAE497 0.31 ABIE40_RS04230 threonine synthase 0.20 ABIE40_RS09345 NAD(P)H-hydrate dehydratase
Xanthomonas campestris pv. campestris strain 8004 0.31 Xcc-8004.2954.1 Threonine synthase (EC 4.2.3.1) 0.28 Xcc-8004.2253.1 NAD(P)HX epimerase / NAD(P)HX dehydratase low > 74
Sinorhizobium meliloti 1021 0.29 SMc00077 threonine synthase 0.16 SMc00946 hypothetical protein
Agrobacterium fabrum C58 0.29 Atu0787 threonine synthase 0.16 Atu1768 hypothetical protein
Rhodanobacter denitrificans FW104-10B01 0.29 LRK54_RS10355 threonine synthase 0.31 LRK54_RS15135 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 59
Rhodanobacter denitrificans MT42 0.28 LRK55_RS09995 threonine synthase 0.31 LRK55_RS14850 NAD(P)H-hydrate dehydratase low > 63
Phaeobacter inhibens DSM 17395 0.28 PGA1_c06310 threonine synthase ThrC 0.13 PGA1_c18700 yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region
Rhodospirillum rubrum S1H 0.28 Rru_A3233 Threonine synthase (NCBI) 0.11 Rru_A1547 hypothetical protein (NCBI)
Azospirillum brasilense Sp245 0.28 AZOBR_RS10545 threonine synthase 0.17 AZOBR_RS07115 hypothetical protein
Bosea sp. OAE506 0.27 ABIE41_RS22985 threonine synthase 0.22 ABIE41_RS16885 NAD(P)H-hydrate dehydratase
Rhodanobacter sp000427505 FW510-R12 0.27 LRK53_RS03155 threonine synthase 0.31 LRK53_RS13480 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 59
Azospirillum sp. SherDot2 0.27 MPMX19_00671 Threonine synthase 0.17 MPMX19_01552 Bifunctional NAD(P)H-hydrate repair enzyme Nnr
Dyella japonica UNC79MFTsu3.2 0.27 ABZR86_RS15975 threonine synthase (EC 4.2.3.1) (from data) 0.31 ABZR86_RS00840 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 74
Xanthobacter sp. DMC5 0.27 GFF1319 Threonine synthase 0.20 GFF1161 Bifunctional NAD(P)H-hydrate repair enzyme Nnr
Rhodanobacter sp. FW510-T8 0.27 OKGIIK_13570 thrC threonine synthase 0.27 OKGIIK_03905 Bifunctional NAD(P)H-hydrate repair enzyme low > 53
Caulobacter crescentus NA1000 Δfur 0.27 CCNA_03510 threonine synthase 0.14 CCNA_02043 sugar kinase
Caulobacter crescentus NA1000 0.27 CCNA_03510 threonine synthase 0.14 CCNA_02043 sugar kinase
Dinoroseobacter shibae DFL-12 0.27 Dshi_1146 threonine synthase (RefSeq) 0.17 Dshi_1837 carbohydrate kinase, YjeF related protein (RefSeq)
Marinobacter adhaerens HP15 0.26 HP15_765 threonine synthase 0.28 HP15_2504 carbohydrate kinase, YjeF related protein
Pseudomonas aeruginosa PA14 0.26 IKLFDK_19070 threonine synthase 0.31 IKLFDK_28795 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 98
Pseudomonas aeruginosa MRSN321 0.26 DY961_RS14295 thrC;go_function=threonine threonine synthase 0.31 DY961_RS10535 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 100
Pseudomonas aeruginosa PUPa3 0.26 DQ20_RS42830 thrC;go_function=threonine threonine synthase 0.31 DQ20_RS51520 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 101
Pseudomonas syringae pv. syringae B728a 0.25 Psyr_1291 L-threonine synthase 0.30 Psyr_0567 Protein of unknown function UPF0031:YjeF-related protein, N-terminal
Pseudomonas syringae pv. syringae B728a ΔmexB 0.25 Psyr_1291 L-threonine synthase 0.30 Psyr_0567 Protein of unknown function UPF0031:YjeF-related protein, N-terminal
Pseudomonas sp. S08-1 0.25 OH686_17765 threonine synthase 0.30 OH686_09495 NAD(P)H-hydrate epimerase / ADP-dependent (S)-NAD(P)H-hydrate dehydratase low > 80
Pseudomonas fluorescens FW300-N2E3 0.25 AO353_04350 threonine synthase 0.31 AO353_13120 carbohydrate kinase
Rhodopseudomonas palustris CGA009 0.25 TX73_004325 threonine synthase 0.16 TX73_015380 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase
Pseudomonas stutzeri RCH2 0.25 Psest_3125 threonine synthase 0.33 Psest_0678 yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region
Pseudomonas fluorescens FW300-N2C3 0.25 AO356_06370 threonine synthase 0.31 AO356_08680 carbohydrate kinase
Pseudomonas fluorescens FW300-N2E2 0.25 Pf6N2E2_3142 Threonine synthase (EC 4.2.3.1) 0.31 Pf6N2E2_3619 NAD(P)HX epimerase / NAD(P)HX dehydratase
Pseudomonas fluorescens FW300-N1B4 0.25 Pf1N1B4_3014 Threonine synthase (EC 4.2.3.1) 0.32 Pf1N1B4_1417 NAD(P)HX epimerase / NAD(P)HX dehydratase
Pseudomonas segetis P6 0.25 MPMX49_01578 Threonine synthase 0.29 MPMX49_04158 Bifunctional NAD(P)H-hydrate repair enzyme Nnr low > 75
Pseudomonas sp. RS175 0.25 PFR28_00334 Threonine synthase 0.31 PFR28_05116 Bifunctional NAD(P)H-hydrate repair enzyme Nnr
Sphingobium sp. HT1-2 0.25 GFF4764 Threonine synthase (EC 4.2.3.1) 0.12 GFF98 NAD(P)H-hydrate epimerase (EC 5.1.99.6) / ADP-dependent (S)-NAD(P)H-hydrate dehydratase (EC 4.2.1.136) low > 95
Pseudomonas sp. DMC3 0.25 GFF1990 Threonine synthase 0.31 GFF3215 Bifunctional NAD(P)H-hydrate repair enzyme Nnr
Pseudomonas fluorescens GW456-L13 0.24 PfGW456L13_1724 Threonine synthase (EC 4.2.3.1) 0.30 PfGW456L13_159 NAD(P)HX epimerase / NAD(P)HX dehydratase
Ralstonia sp. UNC404CL21Col 0.24 ABZR87_RS05865 threonine synthase 0.26 ABZR87_RS12740 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase low > 80
Magnetospirillum magneticum AMB-1 0.24 AMB_RS17140 threonine synthase 0.09 AMB_RS14075 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase
Castellaniella sp019104865 MT123 0.23 ABCV34_RS02300 threonine synthase 0.17 ABCV34_RS02980 NAD(P)H-hydrate dehydratase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.23 GFF3936 Threonine synthase (EC 4.2.3.1) 0.15 GFF4918 NAD(P)HX epimerase / NAD(P)HX dehydratase
Sphingomonas koreensis DSMZ 15582 0.23 Ga0059261_1999 threonine synthase 0.13 Ga0059261_0649 yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region low > 68
Variovorax sp. SCN45 0.22 GFF2800 Threonine synthase (EC 4.2.3.1) 0.19 GFF397 NAD(P)H-hydrate epimerase (EC 5.1.99.6) / ADP-dependent (S)-NAD(P)H-hydrate dehydratase (EC 4.2.1.136)
Dechlorosoma suillum PS 0.22 Dsui_2904 threonine synthase 0.18 Dsui_2898 yjeF-like protein, hydroxyethylthiazole kinase-related protein
Variovorax sp. OAS795 0.22 ABID97_RS10895 threonine synthase 0.16 ABID97_RS17190 NAD(P)H-hydrate dehydratase
Paraburkholderia graminis OAS925 0.22 ABIE53_002027 threonine synthase 0.21 ABIE53_002139 hydroxyethylthiazole kinase-like uncharacterized protein yjeF
Burkholderia phytofirmans PsJN 0.21 BPHYT_RS08960 threonine synthase 0.24 BPHYT_RS09505 carbohydrate kinase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.21 H281DRAFT_00811 L-threonine synthase 0.22 H281DRAFT_00907 yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region
Acidovorax sp. GW101-3H11 0.21 Ac3H11_1505 Threonine synthase (EC 4.2.3.1) 0.16 Ac3H11_415 NAD(P)HX epimerase / NAD(P)HX dehydratase
Paraburkholderia sabiae LMG 24235 0.21 QEN71_RS22400 threonine synthase 0.22 QEN71_RS21930 NAD(P)H-hydrate dehydratase low > 153
Herbaspirillum seropedicae SmR1 0.20 HSERO_RS10470 threonine synthase 0.23 HSERO_RS11180 sugar kinase
Cupriavidus basilensis FW507-4G11 0.20 RR42_RS12535 threonine synthase 0.20 RR42_RS09070 carbohydrate kinase
Ralstonia solanacearum GMI1000 0.19 RS_RS06660 threonine synthase 0.25 RS_RS08700 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase
Ralstonia solanacearum PSI07 0.18 RPSI07_RS17485 threonine synthase 0.25 RPSI07_RS16180 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase
Ralstonia solanacearum IBSBF1503 0.18 RALBFv3_RS15880 threonine synthase 0.26 RALBFv3_RS01295 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase
Ralstonia solanacearum UW163 0.18 UW163_RS13325 threonine synthase 0.26 UW163_RS14605 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase

Not shown: 12 genomes with orthologs for CSW01_11965 only; 9 genomes with orthologs for CSW01_14940 only