Conservation of cofitness between CSW01_01110 and CSW01_11535 in Vibrio cholerae E7946 ATCC 55056

102 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01110 YicC family protein 1.0 CSW01_11535 thiamine-phosphate kinase 0.52 10
Pectobacterium carotovorum WPP14 0.69 HER17_RS20905 YicC family protein 0.49 HER17_RS15945 thiamine-phosphate kinase — —
Alteromonas macleodii MIT1002 0.69 MIT1002_04072 hypothetical protein 0.49 MIT1002_02695 Thiamine-monophosphate kinase — —
Erwinia amylovora T8 0.68 OLJFJH_05750 YicC-like family N-terminal region 0.49 OLJFJH_18075 thiamine-phosphate kinase — —
Pantoea agglomerans CFBP13505 P0401 0.68 PagCFBP13505_RS18765 YicC family protein 0.50 PagCFBP13505_RS10440 thiamine-phosphate kinase — —
Pantoea sp. MT58 0.68 IAI47_00580 YicC family protein 0.50 IAI47_14755 thiamine-phosphate kinase — —
Serratia liquefaciens MT49 0.68 IAI46_24855 YicC family protein 0.49 IAI46_04910 thiamine-phosphate kinase — —
Klebsiella michiganensis M5al 0.67 BWI76_RS27395 hypothetical protein 0.49 BWI76_RS06365 thiamine-monophosphate kinase — —
Dickeya dianthicola ME23 0.67 DZA65_RS00575 YicC family protein 0.48 DZA65_RS05905 thiamine-phosphate kinase — —
Dickeya dadantii 3937 0.67 DDA3937_RS20645 YicC family protein 0.50 DDA3937_RS05520 thiamine-phosphate kinase — —
Dickeya dianthicola 67-19 0.67 HGI48_RS00540 YicC family protein 0.48 HGI48_RS05580 thiamine-phosphate kinase — —
Erwinia tracheiphila HP pepo 2.2 0.66 IJEDHG_07725 YicC-like family N-terminal region 0.48 IJEDHG_26015 thiL thiamine-phosphate kinase — —
Erwinia tracheiphila SCR3 0.66 LU632_RS22050 YicC family protein 0.48 LU632_RS18610 thiL thiamine-phosphate kinase — —
Rahnella sp. WP5 0.66 EX31_RS14510 YicC family protein 0.49 EX31_RS22140 thiamine-phosphate kinase — —
Enterobacter sp. TBS_079 0.66 MPMX20_00091 hypothetical protein 0.50 MPMX20_01009 Thiamine-monophosphate kinase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF365 Protein YicC 0.48 GFF4321 Thiamine-monophosphate kinase (EC 2.7.4.16) — —
Escherichia coli ECOR27 0.65 NOLOHH_07465 yicC UPF0701 protein YicC 0.49 NOLOHH_01385 thiL thiamine-phosphate kinase — —
Escherichia coli ECRC99 0.65 KEDOAH_12560 yicC UPF0701 protein YicC 0.49 KEDOAH_19525 thiL thiamine-phosphate kinase — —
Escherichia coli ECRC100 0.65 OKFHMN_15585 yicC UPF0701 protein YicC 0.49 OKFHMN_08440 thiL thiamine-phosphate kinase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.65 OHPLBJKB_00058 hypothetical protein 0.49 OHPLBJKB_03259 Thiamine-monophosphate kinase — —
Escherichia coli ECRC102 0.65 NIAGMN_13345 yicC UPF0701 protein YicC 0.49 NIAGMN_06495 thiL thiamine-phosphate kinase — —
Escherichia coli ECRC101 0.65 MCAODC_06095 yicC UPF0701 protein YicC 0.49 MCAODC_27665 thiL thiamine-phosphate kinase — —
Escherichia coli ECRC62 0.65 BNILDI_04050 yicC UPF0701 protein YicC 0.49 BNILDI_22800 thiL thiamine-phosphate kinase — —
Escherichia coli ECOR38 0.65 HEPCGN_14405 yicC UPF0701 protein YicC 0.49 HEPCGN_07065 thiL thiamine-phosphate kinase — —
Escherichia coli BL21 0.65 ECD_03501 UPF0701 family protein 0.49 ECD_00365 thiamine monophosphate kinase — —
Escherichia coli BW25113 0.65 b3644 yicC hypothetical protein (NCBI) 0.49 b0417 thiL thiamine monophosphate kinase (NCBI) — —
Enterobacter asburiae PDN3 0.65 EX28DRAFT_3894 TIGR00255 family protein 0.50 EX28DRAFT_2553 thiamine-phosphate kinase — —
Escherichia fergusonii Becca 0.65 EFB2_00169 hypothetical protein 0.49 EFB2_03640 Thiamine-monophosphate kinase — —
Escherichia coli ECRC98 0.65 JDDGAC_19210 yicC UPF0701 protein YicC 0.49 JDDGAC_12095 thiL thiamine-phosphate kinase — —
Escherichia coli Nissle 1917 0.64 ECOLIN_RS20760 YicC/YloC family endoribonuclease 0.49 ECOLIN_RS02520 thiamine-phosphate kinase — —
Klebsiella pneumoniae MKP103 0.64 KDGMDA_08085 YicC-like family N-terminal region 0.50 KDGMDA_14455 thiamine-phosphate kinase — —
Shewanella loihica PV-4 0.63 Shew_3489 hypothetical protein (RefSeq) 0.47 Shew_1192 thiamine-monophosphate kinase (RefSeq) — —
Shewanella amazonensis SB2B 0.62 Sama_0319 hypothetical protein (RefSeq) 0.46 Sama_1021 thiamine-phosphate kinase (RefSeq) — —
Shewanella oneidensis MR-1 0.62 SO4257 conserved hypothetical protein TIGR00255 (NCBI ptt file) 0.47 SO3464 thiL thiamin-monophosphate kinase (NCBI ptt file) — —
Shewanella sp. ANA-3 0.62 Shewana3_3778 hypothetical protein (RefSeq) 0.48 Shewana3_1101 thiamine-monophosphate kinase (RefSeq) — —
Kangiella aquimarina DSM 16071 0.54 B158DRAFT_0582 TIGR00255 family protein 0.33 B158DRAFT_1916 thiamine-monophosphate kinase — —
Marinobacter adhaerens HP15 0.51 HP15_301 conserved hypothetical protein 0.28 HP15_496 thiamine-monophosphate kinase — —
Pseudomonas sp. SVBP6 0.49 COO64_RS01515 YicC/YloC family endoribonuclease 0.33 COO64_RS15865 thiL thiamine-phosphate kinase — —
Pseudomonas sp. S08-1 0.49 OH686_13565 UPF0701 protein YicC 0.31 OH686_15720 thiamine-phosphate kinase — —
Pseudomonas simiae WCS417 0.49 PS417_27815 hypothetical protein 0.31 PS417_25240 thiamine monophosphate kinase — —
Pseudomonas fluorescens FW300-N2E3 0.49 AO353_09265 hypothetical protein 0.31 AO353_06690 thiamine monophosphate kinase — —
Pseudomonas aeruginosa PA14 0.49 IKLFDK_26780 YicC-like family N-terminal region 0.31 IKLFDK_20885 thiamine-phosphate kinase — —
Pseudomonas syringae pv. syringae B728a 0.49 Psyr_0212 Conserved hypothetical protein 255 0.33 Psyr_4457 thiamine-phosphate kinase — —
Pseudomonas fluorescens SBW25 0.49 PFLU_RS29495 YicC family protein 0.32 PFLU_RS26875 thiamine-phosphate kinase — —
Pseudomonas lactucae CFBP13502 0.49 GEMAOFIL_00031 hypothetical protein 0.32 GEMAOFIL_05153 Thiamine-monophosphate kinase — —
Pseudomonas putida KT2440 0.49 PP_5295 conserved protein of unknown function 0.31 PP_0519 thiamin monophosphate kinase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.49 Psyr_0212 Conserved hypothetical protein 255 0.33 Psyr_4457 thiamine-phosphate kinase — —
Pseudomonas sp. BP01 0.49 JOY50_RS09020 YicC/YloC family endoribonuclease 0.31 JOY50_RS20100 thiL thiamine-phosphate kinase — —
Pseudomonas fluorescens SBW25-INTG 0.49 PFLU_RS29495 YicC family protein 0.32 PFLU_RS26875 thiamine-phosphate kinase — —
Pseudomonas fluorescens GW456-L13 0.48 PfGW456L13_783 Protein YicC 0.33 PfGW456L13_1318 Thiamine-monophosphate kinase (EC 2.7.4.16) — —
Pseudomonas sp. RS175 0.48 PFR28_04421 hypothetical protein 0.33 PFR28_03944 Thiamine-monophosphate kinase — —
Pseudomonas fluorescens FW300-N2E2 0.48 Pf6N2E2_4364 Protein YicC 0.31 Pf6N2E2_4924 Thiamine-monophosphate kinase (EC 2.7.4.16) — —
Pseudomonas stutzeri RCH2 0.48 Psest_3814 TIGR00255 family protein 0.32 Psest_3547 thiamine-monophosphate kinase — —
Pseudomonas fluorescens FW300-N1B4 0.48 Pf1N1B4_2116 Protein YicC 0.33 Pf1N1B4_2654 Thiamine-monophosphate kinase (EC 2.7.4.16) — —
Pseudomonas sp. DMC3 0.48 GFF416 hypothetical protein 0.32 GFF3832 Thiamine-monophosphate kinase — —
Pseudomonas fluorescens FW300-N2C3 0.48 AO356_12495 hypothetical protein 0.31 AO356_14955 thiamine monophosphate kinase — —
Pseudomonas segetis P6 0.48 MPMX49_00031 hypothetical protein 0.34 MPMX49_00995 Thiamine-monophosphate kinase — —
Lysobacter sp. OAE881 0.41 ABIE51_RS17280 YicC/YloC family endoribonuclease 0.34 ABIE51_RS04660 thiamine-phosphate kinase — —
Dechlorosoma suillum PS 0.39 Dsui_0497 TIGR00255 family protein 0.29 Dsui_0712 thiamine-monophosphate kinase — —
Xanthomonas campestris pv. campestris strain 8004 0.38 Xcc-8004.1220.1 Protein YicC 0.28 Xcc-8004.4386.1 Thiamine-monophosphate kinase (EC 2.7.4.16) — —
Rhodanobacter denitrificans MT42 0.38 LRK55_RS11475 YicC family protein 0.36 LRK55_RS04345 thiamine-phosphate kinase — —
Rhodanobacter denitrificans FW104-10B01 0.38 LRK54_RS11750 YicC family protein 0.36 LRK54_RS04570 thiamine-phosphate kinase — —
Rhodanobacter sp000427505 FW510-R12 0.38 LRK53_RS16790 YicC family protein 0.36 LRK53_RS05440 thiamine-phosphate kinase — —
Methylophilus sp. DMC18 0.38 GFF2133 hypothetical protein 0.32 GFF837 Thiamine-monophosphate kinase — —
Rhodanobacter sp. FW510-T8 0.37 OKGIIK_12145 yicC YicC-like family, N-terminal region 0.36 OKGIIK_11395 thiL thiamine-phosphate kinase — —
Dyella japonica UNC79MFTsu3.2 0.37 ABZR86_RS11895 YicC/YloC family endoribonuclease 0.37 ABZR86_RS10645 thiamine-phosphate kinase — —
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS04905 hypothetical protein 0.31 RR42_RS17615 thiamine monophosphate kinase — —
Ralstonia sp. UNC404CL21Col 0.34 ABZR87_RS15240 YicC/YloC family endoribonuclease 0.31 ABZR87_RS01570 thiamine-phosphate kinase — —
Ralstonia solanacearum PSI07 0.34 RPSI07_RS13855 YicC family protein 0.33 RPSI07_RS11340 thiamine-phosphate kinase — —
Ralstonia solanacearum GMI1000 0.34 RS_RS10815 YicC family protein 0.34 RS_RS13850 thiamine-phosphate kinase — —
Herbaspirillum seropedicae SmR1 0.34 HSERO_RS10650 hypothetical protein 0.35 HSERO_RS16830 thiamine monophosphate kinase — —
Ralstonia solanacearum UW163 0.34 UW163_RS10390 YicC family protein 0.34 UW163_RS07720 thiamine-phosphate kinase — —
Ralstonia solanacearum IBSBF1503 0.34 RALBFv3_RS03330 YicC family protein 0.34 RALBFv3_RS05905 thiamine-phosphate kinase — —
Paraburkholderia sabiae LMG 24235 0.33 QEN71_RS03650 YicC/YloC family endoribonuclease 0.33 QEN71_RS27045 thiamine-phosphate kinase — —
Paraburkholderia bryophila 376MFSha3.1 0.32 H281DRAFT_04007 TIGR00255 family protein 0.32 H281DRAFT_06307 thiamine-phosphate kinase — —
Paraburkholderia graminis OAS925 0.32 ABIE53_003233 uncharacterized protein (TIGR00255 family) 0.34 ABIE53_003544 thiamine-monophosphate kinase — —
Burkholderia phytofirmans PsJN 0.32 BPHYT_RS15320 hypothetical protein 0.31 BPHYT_RS16885 thiamine monophosphate kinase — —
Rhodopseudomonas palustris CGA009 0.28 TX73_015880 YicC family protein 0.21 TX73_014145 thiamine-phosphate kinase — —
Xanthobacter sp. DMC5 0.28 GFF3533 hypothetical protein 0.22 GFF581 Thiamine-monophosphate kinase — —
Acidovorax sp. GW101-3H11 0.27 Ac3H11_3667 Protein YicC 0.35 Ac3H11_749 Thiamine-monophosphate kinase (EC 2.7.4.16) — —
Variovorax sp. OAS795 0.27 ABID97_RS23655 YicC/YloC family endoribonuclease 0.33 ABID97_RS04870 thiamine-phosphate kinase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.26 A4249_RS06780 YicC family protein 0.20 A4249_RS06005 thiamine-phosphate kinase — —
Variovorax sp. SCN45 0.26 GFF2378 UPF0701 protein YicC 0.33 GFF6265 Thiamine-monophosphate kinase (EC 2.7.4.16) — —
Azospirillum sp. SherDot2 0.26 MPMX19_00983 hypothetical protein 0.27 MPMX19_00731 Thiamine-monophosphate kinase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.26 GFF3251 Protein YicC 0.30 GFF3093 Thiamine-monophosphate kinase (EC 2.7.4.16) — —
Azospirillum brasilense Sp245 0.25 AZOBR_RS16330 hypothetical protein 0.26 AZOBR_RS10050 thiamine-monophosphate kinase — —
Castellaniella sp019104865 MT123 0.24 ABCV34_RS03510 DUF1732 domain-containing protein 0.29 ABCV34_RS10120 thiamine-phosphate kinase — —
Bosea sp. OAE506 0.24 ABIE41_RS17740 YicC/YloC family endoribonuclease 0.22 ABIE41_RS19740 thiamine-phosphate kinase — —
Rhodospirillum rubrum S1H 0.24 Rru_A0428 hypothetical protein (NCBI) 0.23 Rru_A1820 Thiamine-monophosphate kinase (NCBI) — —
Caulobacter crescentus NA1000 0.24 CCNA_01752 YicC-family protein 0.19 CCNA_01423 thiamine-monophosphate kinase — —
Caulobacter crescentus NA1000 Δfur 0.24 CCNA_01752 YicC-family protein 0.19 CCNA_01423 thiamine-monophosphate kinase — —
Desulfovibrio vulgaris Hildenborough JW710 0.21 DVU0898 conserved hypothetical protein (TIGR) 0.18 DVU0157 thiL thiamin-monophosphate kinase (TIGR) — —
Cellulophaga baltica 18 0.18 M666_RS06130 YicC family protein 0.17 M666_RS05690 thiamine-phosphate kinase — —
Parabacteroides merdae CL09T00C40 0.18 HMPREF1078_RS10050 YicC family protein 0.16 HMPREF1078_RS13035 thiamine-phosphate kinase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.18 ABZR88_RS01665 YicC/YloC family endoribonuclease 0.17 ABZR88_RS20925 thiamine-phosphate kinase — —
Bacteroides thetaiotaomicron VPI-5482 0.18 BT_2008 hypothetical protein (RefSeq) 0.17 BT1882 putative thiamine-monophosphate kinase (NCBI ptt file) — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.18 Echvi_2830 TIGR00255 family protein 0.20 Echvi_0088 thiamine-monophosphate kinase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.17 CA264_14585 YicC family protein 0.18 CA264_02015 thiamine-phosphate kinase — —
Bacteroides stercoris CC31F 0.17 HMPREF1181_RS07870 YicC family protein 0.16 HMPREF1181_RS07645 thiamine-phosphate kinase low > 56
Phocaeicola dorei CL03T12C01 0.17 ABI39_RS08135 YicC family protein 0.16 ABI39_RS07910 thiamine-phosphate kinase low > 72
Pedobacter sp. GW460-11-11-14-LB5 0.17 CA265_RS18780 YicC family protein 0.15 CA265_RS21170 thiamine-phosphate kinase — —
Phocaeicola vulgatus CL09T03C04 0.17 HMPREF1058_RS00515 YicC family protein 0.17 HMPREF1058_RS12880 thiamine-phosphate kinase low > 67
Bacteroides ovatus ATCC 8483 0.16 BACOVA_01437 hypothetical protein 0.17 BACOVA_02937 thiamine-phosphate kinase — —

Not shown: 8 genomes with orthologs for CSW01_01110 only; 6 genomes with orthologs for CSW01_11535 only